Fungal Genomics

at Utrecht University

PFAM Domain


General information

PFAM domainPF04998
Short nameRNA_pol_Rpb1_5
Long nameRNA polymerase Rpb1, domain 5
Proteins with at least one of this domain3
Total domain count3
More informationPFAM website

Proteins with this PFAM domain

Note: all PFAM domains are shown for these proteins
Short name Long name E-value Start End Name
protein ID PFAM
Pro_DTO377G3_2|g1804.t1 PF04997 RNA_pol_Rpb1_1 RNA polymerase Rpb1, domain 1 3.8E-85 22 370
PF00623 RNA_pol_Rpb1_2 RNA polymerase Rpb1, domain 2 1.0E-71 372 539
PF04983 RNA_pol_Rpb1_3 RNA polymerase Rpb1, domain 3 6.0E-34 542 718
PF05000 RNA_pol_Rpb1_4 RNA polymerase Rpb1, domain 4 5.8E-27 746 849
PF04998 RNA_pol_Rpb1_5 RNA polymerase Rpb1, domain 5 2.3E-79 856 1361
Pro_DTO377G3_2|g4098.t1 PF04997 RNA_pol_Rpb1_1 RNA polymerase Rpb1, domain 1 1.6E-111 14 351
PF00623 RNA_pol_Rpb1_2 RNA polymerase Rpb1, domain 2 8.0E-75 353 518
PF04983 RNA_pol_Rpb1_3 RNA polymerase Rpb1, domain 3 2.0E-44 521 685
PF05000 RNA_pol_Rpb1_4 RNA polymerase Rpb1, domain 4 3.1E-37 710 816
PF04998 RNA_pol_Rpb1_5 RNA polymerase Rpb1, domain 5 5.6E-103 823 1416
PF04992 RNA_pol_Rpb1_6 RNA polymerase Rpb1, domain 6 1.8E-64 889 1072
PF04990 RNA_pol_Rpb1_7 RNA polymerase Rpb1, domain 7 2.0E-44 1157 1289
PF05001 RNA_pol_Rpb1_R RNA polymerase Rpb1 C-terminal repeat 1.4E+01 1569 1579
PF05001 RNA_pol_Rpb1_R RNA polymerase Rpb1 C-terminal repeat 1.5E+00 1582 1593
PF05001 RNA_pol_Rpb1_R RNA polymerase Rpb1 C-terminal repeat 6.0E-01 1611 1623
PF05001 RNA_pol_Rpb1_R RNA polymerase Rpb1 C-terminal repeat 7.9E-02 1627 1640
PF05001 RNA_pol_Rpb1_R RNA polymerase Rpb1 C-terminal repeat 8.0E-02 1641 1654
PF05001 RNA_pol_Rpb1_R RNA polymerase Rpb1 C-terminal repeat 3.7E-01 1655 1668
PF05001 RNA_pol_Rpb1_R RNA polymerase Rpb1 C-terminal repeat 1.5E-03 1669 1687
PF05001 RNA_pol_Rpb1_R RNA polymerase Rpb1 C-terminal repeat 1.3E-01 1685 1697
PF05001 RNA_pol_Rpb1_R RNA polymerase Rpb1 C-terminal repeat 5.9E-01 1699 1713
PF05001 RNA_pol_Rpb1_R RNA polymerase Rpb1 C-terminal repeat 7.6E-03 1719 1732
PF05001 RNA_pol_Rpb1_R RNA polymerase Rpb1 C-terminal repeat 6.7E-02 1726 1737
Pro_DTO377G3_2|g5967.t1 PF04997 RNA_pol_Rpb1_1 RNA polymerase Rpb1, domain 1 3.7E-27 11 464
PF00623 RNA_pol_Rpb1_2 RNA polymerase Rpb1, domain 2 2.7E-66 466 644
PF04983 RNA_pol_Rpb1_3 RNA polymerase Rpb1, domain 3 4.3E-29 649 826
PF05000 RNA_pol_Rpb1_4 RNA polymerase Rpb1, domain 4 2.2E-16 887 975
PF04998 RNA_pol_Rpb1_5 RNA polymerase Rpb1, domain 5 4.8E-86 982 1618

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