Fungal Genomics

at Utrecht University

PFAM Domain

General information

PFAM domainPF04851
Short nameResIII
Long nameType III restriction enzyme, res subunit
Proteins with at least one of this domain39
Total domain count41
More informationPFAM website

Proteins with this PFAM domain

Note: all PFAM domains are shown for these proteins
Short name Long name E-value Start End Name
protein ID PFAM
Pro_DTO377G3_2|g1034.t1 PF13086 AAA_11 AAA domain 2.8E-64 232 447
PF13604 AAA_30 AAA domain 5.2E-12 232 446
PF04851 ResIII Type III restriction enzyme, res subunit 2.9E-05 233 414
PF13245 AAA_19 AAA domain 4.0E-09 237 444
PF09848 DUF2075 Schlafen group 3, DNA/RNA helicase domain 2.9E-05 249 419
PF13087 AAA_12 AAA domain 2.8E-55 474 679
Pro_DTO377G3_2|g1442.t1 PF00270 DEAD DEAD/DEAH box helicase 8.0E-44 48 212
PF04851 ResIII Type III restriction enzyme, res subunit 9.0E-05 61 206
PF00271 Helicase_C Helicase conserved C-terminal domain 1.3E-30 249 357
Pro_DTO377G3_2|g159.t1 PF04851 ResIII Type III restriction enzyme, res subunit 1.2E-13 80 249
PF00270 DEAD DEAD/DEAH box helicase 1.1E-10 83 248
PF00271 Helicase_C Helicase conserved C-terminal domain 2.2E-15 413 523
PF03368 Dicer_dimer Dicer dimerisation domain 2.1E-21 602 688
PF14622 Ribonucleas_3_3 Ribonuclease-III-like 5.4E-09 1026 1158
PF00636 Ribonuclease_3 Ribonuclease III domain 4.8E-19 1042 1154
PF14622 Ribonucleas_3_3 Ribonuclease-III-like 1.6E-13 1220 1371
PF00636 Ribonuclease_3 Ribonuclease III domain 1.8E-20 1242 1356
Pro_DTO377G3_2|g2001.t1 PF09416 UPF1_Zn_bind RNA helicase (UPF2 interacting domain) 7.2E-75 69 220
PF18141 UPF1_1B_dom RNA helicase UPF1, 1B domain 1.7E-33 273 367
PF13086 AAA_11 AAA domain 1.8E-21 424 522
PF13604 AAA_30 AAA domain 3.9E-12 424 622
PF13245 AAA_19 AAA domain 1.9E-10 428 620
PF04851 ResIII Type III restriction enzyme, res subunit 1.0E-05 429 552
PF13086 AAA_11 AAA domain 9.8E-31 526 626
PF13087 AAA_12 AAA domain 4.2E-59 633 829
Pro_DTO377G3_2|g2067.t1 PF04851 ResIII Type III restriction enzyme, res subunit 4.4E-07 219 381
PF00176 SNF2-rel_dom SNF2-related domain 1.1E-65 237 506
PF00271 Helicase_C Helicase conserved C-terminal domain 4.1E-22 649 757
Pro_DTO377G3_2|g2430.t1 PF00270 DEAD DEAD/DEAH box helicase 2.1E-14 19 161
PF04851 ResIII Type III restriction enzyme, res subunit 7.3E-12 21 185
PF00271 Helicase_C Helicase conserved C-terminal domain 1.7E-16 346 471
PF03368 Dicer_dimer Dicer dimerisation domain 3.2E-24 542 632
PF14622 Ribonucleas_3_3 Ribonuclease-III-like 7.3E-13 924 1044
PF00636 Ribonuclease_3 Ribonuclease III domain 1.9E-22 928 1033
PF14622 Ribonucleas_3_3 Ribonuclease-III-like 5.3E-09 1085 1155
PF00636 Ribonuclease_3 Ribonuclease III domain 4.1E-15 1108 1255
Pro_DTO377G3_2|g2454.t1 PF00270 DEAD DEAD/DEAH box helicase 2.9E-26 284 466
PF04851 ResIII Type III restriction enzyme, res subunit 2.4E-08 289 465
PF00271 Helicase_C Helicase conserved C-terminal domain 2.2E-06 527 669
PF02889 Sec63 Sec63 Brl domain 1.5E-82 793 1097
PF00270 DEAD DEAD/DEAH box helicase 1.2E-22 1143 1306
PF04851 ResIII Type III restriction enzyme, res subunit 2.7E-11 1154 1275
PF00271 Helicase_C Helicase conserved C-terminal domain 5.0E-07 1419 1506
PF02889 Sec63 Sec63 Brl domain 9.1E-48 1634 1977
Pro_DTO377G3_2|g265.t1 PF00270 DEAD DEAD/DEAH box helicase 3.9E-44 170 365
PF04851 ResIII Type III restriction enzyme, res subunit 6.5E-06 174 333
PF00271 Helicase_C Helicase conserved C-terminal domain 2.8E-18 504 572
PF13959 DUF4217 Domain of unknown function (DUF4217) 1.5E-19 634 694
Pro_DTO377G3_2|g2728.t1 PF00270 DEAD DEAD/DEAH box helicase 4.7E-41 114 287
PF04851 ResIII Type III restriction enzyme, res subunit 5.5E-07 135 282
PF00271 Helicase_C Helicase conserved C-terminal domain 3.3E-30 334 440
Pro_DTO377G3_2|g3217.t1 PF16399 Aquarius_N Intron-binding protein aquarius N-terminus 0.0E+00 16 790
PF13086 AAA_11 AAA domain 3.3E-21 794 1091
PF13245 AAA_19 AAA domain 1.0E-05 794 865
PF04851 ResIII Type III restriction enzyme, res subunit 9.6E-06 804 904
PF13087 AAA_12 AAA domain 6.4E-26 1102 1293
Pro_DTO377G3_2|g3300.t1 PF00176 SNF2-rel_dom SNF2-related domain 1.2E-44 248 553
PF04851 ResIII Type III restriction enzyme, res subunit 2.7E-09 264 435
PF00271 Helicase_C Helicase conserved C-terminal domain 9.5E-13 776 878
Pro_DTO377G3_2|g3912.t1 PF04851 ResIII Type III restriction enzyme, res subunit 3.0E-09 279 451
PF00176 SNF2-rel_dom SNF2-related domain 8.9E-60 284 582
PF00271 Helicase_C Helicase conserved C-terminal domain 2.9E-15 618 732
Pro_DTO377G3_2|g4212.t1 PF00270 DEAD DEAD/DEAH box helicase 6.5E-30 134 359
PF04851 ResIII Type III restriction enzyme, res subunit 8.3E-05 134 355
PF00271 Helicase_C Helicase conserved C-terminal domain 9.5E-19 435 568
Pro_DTO377G3_2|g4365.t1 PF00270 DEAD DEAD/DEAH box helicase 1.2E-35 130 297
PF04851 ResIII Type III restriction enzyme, res subunit 1.3E-07 146 293
PF00271 Helicase_C Helicase conserved C-terminal domain 1.1E-24 336 444
Pro_DTO377G3_2|g485.t1 PF17681 GCP_N_terminal Gamma tubulin complex component N-terminal 4.3E-31 33 315
PF04130 GCP_C_terminal Gamma tubulin complex component C-terminal 1.2E-18 326 781
PF00270 DEAD DEAD/DEAH box helicase 2.4E-17 1606 1766
PF04851 ResIII Type III restriction enzyme, res subunit 1.0E-10 1609 1765
PF00271 Helicase_C Helicase conserved C-terminal domain 2.7E-05 2111 2183
Pro_DTO377G3_2|g5133.t1 PF04851 ResIII Type III restriction enzyme, res subunit 1.8E-08 221 394
PF00176 SNF2-rel_dom SNF2-related domain 6.1E-51 239 508
PF00271 Helicase_C Helicase conserved C-terminal domain 2.5E-18 603 715
PF14773 VIGSSK Helicase-associated putative binding domain, C-terminal 1.6E-26 833 898
Pro_DTO377G3_2|g5260.t1 PF04851 ResIII Type III restriction enzyme, res subunit 2.5E-06 486 670
PF00176 SNF2-rel_dom SNF2-related domain 5.8E-70 494 804
PF13920 zf-C3HC4_3 Zinc finger, C3HC4 type (RING finger) 1.2E-06 845 905
PF00097 zf-C3HC4 Zinc finger, C3HC4 type (RING finger) 2.0E-04 848 879
PF13923 zf-C3HC4_2 Zinc finger, C3HC4 type (RING finger) 5.5E-08 848 876
PF00271 Helicase_C Helicase conserved C-terminal domain 6.6E-16 1006 1119
Pro_DTO377G3_2|g5323.t1 PF08658 Rad54_N Rad54 N terminal 4.5E-41 65 206
PF04851 ResIII Type III restriction enzyme, res subunit 1.3E-06 227 405
PF00176 SNF2-rel_dom SNF2-related domain 4.1E-58 247 537
PF00271 Helicase_C Helicase conserved C-terminal domain 1.3E-14 582 687
Pro_DTO377G3_2|g5344.t1 PF00270 DEAD DEAD/DEAH box helicase 7.3E-26 233 398
PF04851 ResIII Type III restriction enzyme, res subunit 1.8E-13 238 397
PF00271 Helicase_C Helicase conserved C-terminal domain 4.2E-08 509 595
PF02889 Sec63 Sec63 Brl domain 9.1E-36 712 1022
Pro_DTO377G3_2|g5549.t1 PF00176 SNF2-rel_dom SNF2-related domain 1.9E-48 767 1100
PF04851 ResIII Type III restriction enzyme, res subunit 2.2E-06 771 969
PF00271 Helicase_C Helicase conserved C-terminal domain 1.0E-19 1188 1294
Pro_DTO377G3_2|g5589.t1 PF08880 QLQ QLQ 4.8E-13 115 149
PF07529 HSA HSA domain 7.7E-19 345 415
PF04851 ResIII Type III restriction enzyme, res subunit 2.0E-10 520 679
PF00176 SNF2-rel_dom SNF2-related domain 2.0E-80 523 816
PF00271 Helicase_C Helicase conserved C-terminal domain 2.3E-19 840 953
PF14619 SnAC Snf2-ATP coupling, chromatin remodelling complex 2.3E-15 1050 1114
PF00439 Bromodomain Bromodomain 2.7E-23 1239 1314
Pro_DTO377G3_2|g5853.t1 PF00270 DEAD DEAD/DEAH box helicase 1.8E-42 50 222
PF04851 ResIII Type III restriction enzyme, res subunit 3.3E-07 62 185
PF00271 Helicase_C Helicase conserved C-terminal domain 1.2E-29 259 428
Pro_DTO377G3_2|g6422.t1 PF13625 Helicase_C_3 Helicase conserved C-terminal domain 8.5E-37 89 212
PF04851 ResIII Type III restriction enzyme, res subunit 1.0E-15 329 484
PF00176 SNF2-rel_dom SNF2-related domain 5.6E-11 346 493
PF16203 ERCC3_RAD25_C ERCC3/RAD25/XPB C-terminal helicase 8.5E-127 510 749
PF00271 Helicase_C Helicase conserved C-terminal domain 4.5E-13 559 660
Pro_DTO377G3_2|g6594.t1 PF00176 SNF2-rel_dom SNF2-related domain 2.0E-67 322 578
PF04851 ResIII Type III restriction enzyme, res subunit 1.1E-07 345 513
PF00271 Helicase_C Helicase conserved C-terminal domain 5.8E-16 877 987
Pro_DTO377G3_2|g6794.t1 PF04851 ResIII Type III restriction enzyme, res subunit 3.5E-08 575 735
PF00176 SNF2-rel_dom SNF2-related domain 1.3E-56 591 866
PF00271 Helicase_C Helicase conserved C-terminal domain 2.0E-18 937 1049
Pro_DTO377G3_2|g7177.t1 PF00270 DEAD DEAD/DEAH box helicase 2.3E-17 162 309
PF04851 ResIII Type III restriction enzyme, res subunit 6.1E-05 163 307
PF00271 Helicase_C Helicase conserved C-terminal domain 6.0E-06 480 559
PF13234 rRNA_proc-arch rRNA-processing arch domain 7.8E-92 613 878
PF08148 DSHCT DSHCT (NUC185) domain 5.8E-53 906 1075
Pro_DTO377G3_2|g7286.t1 PF07529 HSA HSA domain 7.3E-09 333 396
PF04851 ResIII Type III restriction enzyme, res subunit 7.5E-11 811 971
PF00176 SNF2-rel_dom SNF2-related domain 1.1E-67 830 1113
PF00271 Helicase_C Helicase conserved C-terminal domain 1.6E-18 1361 1473
Pro_DTO377G3_2|g7310.t1 PF00270 DEAD DEAD/DEAH box helicase 2.5E-49 110 279
PF04851 ResIII Type III restriction enzyme, res subunit 2.4E-08 130 274
PF00271 Helicase_C Helicase conserved C-terminal domain 1.7E-29 319 432
Pro_DTO377G3_2|g7573.t1 PF04851 ResIII Type III restriction enzyme, res subunit 3.2E-11 192 352
PF00176 SNF2-rel_dom SNF2-related domain 6.9E-84 208 476
PF00271 Helicase_C Helicase conserved C-terminal domain 1.1E-16 498 611
PF09110 HAND HAND 1.1E-37 759 864
PF09111 SLIDE SLIDE 2.9E-42 922 1037
Pro_DTO377G3_2|g7576.t1 PF15446 zf-PHD-like PHD/FYVE-zinc-finger like domain 6.7E-51 315 463
PF04851 ResIII Type III restriction enzyme, res subunit 9.9E-05 679 844
PF00176 SNF2-rel_dom SNF2-related domain 3.4E-54 698 970
PF11496 HDA2-3 Class II histone deacetylase complex subunits 2 and 3 3.3E-13 912 1134
PF00271 Helicase_C Helicase conserved C-terminal domain 6.5E-20 998 1108
PF18585 zf-CCCH_6 Chromatin remodeling factor Mit1 C-terminal Zn finger 2 6.2E-24 1413 1465
Pro_DTO377G3_2|g767.t1 PF00270 DEAD DEAD/DEAH box helicase 9.2E-47 70 238
PF04851 ResIII Type III restriction enzyme, res subunit 1.1E-07 83 232
PF00271 Helicase_C Helicase conserved C-terminal domain 5.1E-23 277 386
PF13959 DUF4217 Domain of unknown function (DUF4217) 2.9E-22 428 488
Pro_DTO377G3_2|g7972.t1 PF00270 DEAD DEAD/DEAH box helicase 2.7E-16 164 340
PF04851 ResIII Type III restriction enzyme, res subunit 2.4E-08 165 337
PF00271 Helicase_C Helicase conserved C-terminal domain 5.1E-07 493 563
PF20470 HTH_61 Helix-turn-helix domain 2.6E-25 568 658
Pro_DTO377G3_2|g8314.t1 PF00176 SNF2-rel_dom SNF2-related domain 4.8E-71 274 655
PF04851 ResIII Type III restriction enzyme, res subunit 1.3E-06 334 523
PF00271 Helicase_C Helicase conserved C-terminal domain 4.7E-18 677 788
Pro_DTO377G3_2|g8472.t1 PF04851 ResIII Type III restriction enzyme, res subunit 2.9E-06 341 514
PF00176 SNF2-rel_dom SNF2-related domain 6.5E-53 354 681
PF00097 zf-C3HC4 Zinc finger, C3HC4 type (RING finger) 1.3E-05 695 738
PF00271 Helicase_C Helicase conserved C-terminal domain 2.8E-16 777 891
Pro_DTO377G3_2|g8496.t1 PF18149 Helicase_PWI N-terminal helicase PWI domain 1.2E-27 293 404
PF00270 DEAD DEAD/DEAH box helicase 7.7E-28 529 704
PF04851 ResIII Type III restriction enzyme, res subunit 1.6E-11 542 703
PF00271 Helicase_C Helicase conserved C-terminal domain 5.2E-07 765 907
PF02889 Sec63 Sec63 Brl domain 4.7E-95 1029 1335
PF04851 ResIII Type III restriction enzyme, res subunit 2.0E-07 1374 1514
PF00270 DEAD DEAD/DEAH box helicase 3.6E-18 1380 1542
PF02889 Sec63 Sec63 Brl domain 1.7E-71 1864 2185
Pro_DTO377G3_2|g8841.t1 PF00270 DEAD DEAD/DEAH box helicase 4.2E-16 302 452
PF04851 ResIII Type III restriction enzyme, res subunit 6.1E-21 303 446
PF00271 Helicase_C Helicase conserved C-terminal domain 2.2E-19 660 766
Pro_DTO377G3_2|g8924.t1 PF04851 ResIII Type III restriction enzyme, res subunit 1.4E-12 27 155
PF00271 Helicase_C Helicase conserved C-terminal domain 4.3E-11 234 331
Pro_DTO377G3_2|g896.t1 PF04851 ResIII Type III restriction enzyme, res subunit 1.1E-07 251 448
PF00270 DEAD DEAD/DEAH box helicase 6.8E-16 255 358
PF00270 DEAD DEAD/DEAH box helicase 2.0E-15 402 501
PF00271 Helicase_C Helicase conserved C-terminal domain 2.1E-19 640 740
Pro_DTO377G3_2|g8962.t1 PF13892 DBINO DNA-binding domain 1.2E-49 478 609
PF04851 ResIII Type III restriction enzyme, res subunit 1.4E-06 725 893
PF00176 SNF2-rel_dom SNF2-related domain 3.2E-67 743 1028
PF00271 Helicase_C Helicase conserved C-terminal domain 1.7E-18 1310 1422

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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