Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G2_2|g5342.t1
Gene name
Locationscaffold_010:546063..547236
Strand-
Gene length (bp)1173
Transcript length (bp)1173
Coding sequence length (bp)1173
Protein length (aa) 391

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF02144 Rad1 Repair protein Rad1/Rec1/Rad17 1.2E-93 5 341

GO

GO Term Description Terminal node
GO:0000077 DNA damage checkpoint signaling Yes
GO:0008150 biological_process No
GO:0033554 cellular response to stress No
GO:0051716 cellular response to stimulus No
GO:0048523 negative regulation of cellular process No
GO:1901988 negative regulation of cell cycle phase transition No
GO:0007165 signal transduction No
GO:1901987 regulation of cell cycle phase transition No
GO:0065007 biological regulation No
GO:0045786 negative regulation of cell cycle No
GO:0006974 cellular response to DNA damage stimulus No
GO:0051726 regulation of cell cycle No
GO:0050789 regulation of biological process No
GO:0000075 cell cycle checkpoint signaling No
GO:0031570 DNA integrity checkpoint signaling No
GO:0009987 cellular process No
GO:0048519 negative regulation of biological process No
GO:0010564 regulation of cell cycle process No
GO:0035556 intracellular signal transduction No
GO:0050896 response to stimulus No
GO:0010948 negative regulation of cell cycle process No
GO:0050794 regulation of cellular process No
GO:0006950 response to stress No
GO:0042770 signal transduction in response to DNA damage No

Deeploc

Deeploc data not available for this genome

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID2
Orthogroup3897
Change Orthofinder run
Species Protein ID
Penicillium roqueforti DTO002I6 Pro_DTO002I6_2|g4414.t1
Penicillium roqueforti DTO003C3 Pro_DTO003C3_2|g1674.t1
Penicillium roqueforti DTO003H1 (CBS 147308) Pro_DTO003H1_2|g2059.t1
Penicillium roqueforti DTO006G1 Pro_DTO006G1_2|g1897.t1
Penicillium roqueforti DTO006G7 Pro_DTO006G7_3|g2505.t1
Penicillium roqueforti DTO012A1 Pro_DTO012A1_2|g8947.t1
Penicillium roqueforti DTO012A2 (CBS 147309) Pro_DTO012A2_2|g7594.t1
Penicillium roqueforti DTO012A6 (CBS 147310) Pro_DTO012A6_2|g3667.t1
Penicillium roqueforti DTO012A7 Pro_DTO012A7_2|g9729.t1
Penicillium roqueforti DTO012A8 Pro_DTO012A8_2|g8766.t1
Penicillium roqueforti DTO012A9 Pro_DTO012A9_2|g6833.t1
Penicillium roqueforti DTO013E5 Pro_DTO013E5_2|g7103.t1
Penicillium roqueforti DTO013F2 Pro_DTO013F2_2|g4859.t1
Penicillium roqueforti DTO013F5 (CBS 147311) Pro_DTO013F5_2|g7131.t1
Penicillium roqueforti DTO027I6 Pro_DTO027I6_2|g263.t1
Penicillium roqueforti DTO032C6 Pro_DTO032C6_2|g4042.t1
Penicillium roqueforti DTO039G3 Pro_DTO039G3_2|g6191.t1
Penicillium roqueforti DTO046C5 Pro_DTO046C5_2|g4250.t1
Penicillium roqueforti DTO070G2 (CBS 147317) Pro_DTO070G2_2|g4911.t1
Penicillium roqueforti DTO081F9 (CBS 147318) Pro_DTO081F9_2|g5078.t1
Penicillium roqueforti DTO101D6 (CBS 147325) Pro_DTO101D6_2|g6194.t1
Penicillium roqueforti DTO102I9 (CBS 147326) Pro_DTO102I9_2|g7291.t1
Penicillium roqueforti DTO126G2 (CBS 147330) Pro_DTO126G2_2|g3211.t1
Penicillium roqueforti DTO127F7 (CBS 147331) Pro_DTO127F7_2|g5243.t1
Penicillium roqueforti DTO127F9 (CBS 147332) Pro_DTO127F9_2|g2297.t1
Penicillium roqueforti DTO130C1 (CBS 147333) Pro_DTO130C1_2|g5533.t1
Penicillium roqueforti DTO163C3 (CBS 147337) Pro_DTO163C3_2|g7756.t1
Penicillium roqueforti DTO163F5 (CBS 147338) Pro_DTO163F5_2|g6243.t1
Penicillium roqueforti DTO163G4 (CBS 147339) Pro_DTO163G4_2|g2384.t1
Penicillium roqueforti DTO265D5 (CBS 147372) Pro_DTO265D5_2|g5231.t1
Penicillium roqueforti DTO369A1 (CBS 147354) Pro_DTO369A1_2|g7774.t1
Penicillium roqueforti DTO375B1 (CBS 147355) Pro_DTO375B1_2|g3929.t1
Penicillium roqueforti DTO377G2 (LCP 96.3914a) Pro_DTO377G2_2|g5342.t1 (this protein)
Penicillium roqueforti LCP96 04111 Pro_DTO377G3_2|g7515.t1

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G2_2|g5342.t1
MEPLFAGVSNNAHHLYTLLSCIGFAHKATVQITPDGLRFSVEEGRVIQGLAFLDKSLFTSYTFNPSTDPEPNNQN
GTPQEDNELQNEAYPHFVVSLTAILETLKIFGINELSESNRPRDTSITQTGTASSSAFNAPALLMDRSCTLKYAQ
HGAPLSITITEAGVKTTCELVTYEPDEDEADIPLQRDAIIMKIIMRSAWLHNAIAELDSSTPTILKLSACAKREP
YFALSGAGGPFSESTVEFSVDQHNEIAGGAGQGTTQSQMRKVLLDNGAARTRATKAKLAPTVTETFLVSPPSSMG
ERIQQSYRFSLIRKAARAMSVANKVSIRGDRQGVLSLQFMVELDDHNVPVGRSIGAGVKGPNGPVCFVDFRFVPL
LDEEEAEMEIGAESE*
Coding >Pro_DTO377G2_2|g5342.t1
ATGGAGCCCCTTTTCGCTGGTGTCTCCAACAACGCCCACCATCTCTACACGCTGCTCTCCTGCATTGGTTTCGCA
CACAAGGCCACTGTTCAAATCACCCCGGATGGCCTCCGATTCTCAGTGGAGGAAGGCCGCGTCATTCAAGGACTA
GCGTTTCTTGACAAGTCACTCTTCACCAGCTACACATTCAATCCATCGACCGACCCTGAACCTAACAACCAGAAC
GGAACACCCCAAGAAGACAATGAATTGCAAAATGAGGCTTACCCTCATTTTGTTGTTTCTCTCACCGCTATCCTC
GAAACCCTAAAGATCTTCGGTATCAACGAGCTCTCCGAGTCCAATCGACCCCGCGACACTAGCATCACGCAAACC
GGCACCGCCTCGTCAAGCGCATTCAACGCCCCAGCCTTGCTCATGGACCGCTCCTGCACCCTAAAATACGCCCAA
CACGGCGCCCCACTTAGCATCACCATCACTGAAGCTGGCGTGAAAACAACCTGCGAGCTAGTAACATATGAGCCC
GACGAAGACGAAGCAGACATTCCCCTCCAGCGCGACGCTATCATCATGAAAATCATTATGCGCTCCGCCTGGCTA
CACAATGCCATTGCCGAACTCGACTCCTCCACCCCCACGATCCTAAAACTGTCCGCCTGTGCCAAGCGAGAACCG
TACTTTGCTCTCTCCGGTGCAGGCGGCCCGTTCAGTGAATCCACTGTGGAATTCTCAGTTGACCAGCATAACGAG
ATTGCCGGTGGCGCTGGTCAGGGCACCACACAATCTCAGATGCGTAAGGTGTTGCTCGATAATGGCGCTGCCCGG
ACTCGCGCAACTAAAGCTAAGCTTGCACCTACGGTCACAGAGACTTTCCTTGTTTCTCCTCCTTCCTCTATGGGC
GAGCGCATTCAACAGAGCTATCGCTTTTCGTTAATTCGCAAGGCCGCGAGAGCTATGTCTGTCGCTAATAAGGTC
AGCATCCGTGGGGATAGACAGGGGGTGTTGAGCTTACAGTTCATGGTTGAGCTTGATGATCATAATGTGCCAGTG
GGCAGATCGATCGGTGCTGGCGTAAAGGGTCCCAATGGACCTGTGTGCTTTGTGGACTTCCGGTTTGTGCCGTTG
CTAGACGAAGAGGAAGCTGAGATGGAGATAGGAGCAGAAAGCGAATAG
Transcript >Pro_DTO377G2_2|g5342.t1
ATGGAGCCCCTTTTCGCTGGTGTCTCCAACAACGCCCACCATCTCTACACGCTGCTCTCCTGCATTGGTTTCGCA
CACAAGGCCACTGTTCAAATCACCCCGGATGGCCTCCGATTCTCAGTGGAGGAAGGCCGCGTCATTCAAGGACTA
GCGTTTCTTGACAAGTCACTCTTCACCAGCTACACATTCAATCCATCGACCGACCCTGAACCTAACAACCAGAAC
GGAACACCCCAAGAAGACAATGAATTGCAAAATGAGGCTTACCCTCATTTTGTTGTTTCTCTCACCGCTATCCTC
GAAACCCTAAAGATCTTCGGTATCAACGAGCTCTCCGAGTCCAATCGACCCCGCGACACTAGCATCACGCAAACC
GGCACCGCCTCGTCAAGCGCATTCAACGCCCCAGCCTTGCTCATGGACCGCTCCTGCACCCTAAAATACGCCCAA
CACGGCGCCCCACTTAGCATCACCATCACTGAAGCTGGCGTGAAAACAACCTGCGAGCTAGTAACATATGAGCCC
GACGAAGACGAAGCAGACATTCCCCTCCAGCGCGACGCTATCATCATGAAAATCATTATGCGCTCCGCCTGGCTA
CACAATGCCATTGCCGAACTCGACTCCTCCACCCCCACGATCCTAAAACTGTCCGCCTGTGCCAAGCGAGAACCG
TACTTTGCTCTCTCCGGTGCAGGCGGCCCGTTCAGTGAATCCACTGTGGAATTCTCAGTTGACCAGCATAACGAG
ATTGCCGGTGGCGCTGGTCAGGGCACCACACAATCTCAGATGCGTAAGGTGTTGCTCGATAATGGCGCTGCCCGG
ACTCGCGCAACTAAAGCTAAGCTTGCACCTACGGTCACAGAGACTTTCCTTGTTTCTCCTCCTTCCTCTATGGGC
GAGCGCATTCAACAGAGCTATCGCTTTTCGTTAATTCGCAAGGCCGCGAGAGCTATGTCTGTCGCTAATAAGGTC
AGCATCCGTGGGGATAGACAGGGGGTGTTGAGCTTACAGTTCATGGTTGAGCTTGATGATCATAATGTGCCAGTG
GGCAGATCGATCGGTGCTGGCGTAAAGGGTCCCAATGGACCTGTGTGCTTTGTGGACTTCCGGTTTGTGCCGTTG
CTAGACGAAGAGGAAGCTGAGATGGAGATAGGAGCAGAAAGCGAATAG
Gene >Pro_DTO377G2_2|g5342.t1
ATGGAGCCCCTTTTCGCTGGTGTCTCCAACAACGCCCACCATCTCTACACGCTGCTCTCCTGCATTGGTTTCGCA
CACAAGGCCACTGTTCAAATCACCCCGGATGGCCTCCGATTCTCAGTGGAGGAAGGCCGCGTCATTCAAGGACTA
GCGTTTCTTGACAAGTCACTCTTCACCAGCTACACATTCAATCCATCGACCGACCCTGAACCTAACAACCAGAAC
GGAACACCCCAAGAAGACAATGAATTGCAAAATGAGGCTTACCCTCATTTTGTTGTTTCTCTCACCGCTATCCTC
GAAACCCTAAAGATCTTCGGTATCAACGAGCTCTCCGAGTCCAATCGACCCCGCGACACTAGCATCACGCAAACC
GGCACCGCCTCGTCAAGCGCATTCAACGCCCCAGCCTTGCTCATGGACCGCTCCTGCACCCTAAAATACGCCCAA
CACGGCGCCCCACTTAGCATCACCATCACTGAAGCTGGCGTGAAAACAACCTGCGAGCTAGTAACATATGAGCCC
GACGAAGACGAAGCAGACATTCCCCTCCAGCGCGACGCTATCATCATGAAAATCATTATGCGCTCCGCCTGGCTA
CACAATGCCATTGCCGAACTCGACTCCTCCACCCCCACGATCCTAAAACTGTCCGCCTGTGCCAAGCGAGAACCG
TACTTTGCTCTCTCCGGTGCAGGCGGCCCGTTCAGTGAATCCACTGTGGAATTCTCAGTTGACCAGCATAACGAG
ATTGCCGGTGGCGCTGGTCAGGGCACCACACAATCTCAGATGCGTAAGGTGTTGCTCGATAATGGCGCTGCCCGG
ACTCGCGCAACTAAAGCTAAGCTTGCACCTACGGTCACAGAGACTTTCCTTGTTTCTCCTCCTTCCTCTATGGGC
GAGCGCATTCAACAGAGCTATCGCTTTTCGTTAATTCGCAAGGCCGCGAGAGCTATGTCTGTCGCTAATAAGGTC
AGCATCCGTGGGGATAGACAGGGGGTGTTGAGCTTACAGTTCATGGTTGAGCTTGATGATCATAATGTGCCAGTG
GGCAGATCGATCGGTGCTGGCGTAAAGGGTCCCAATGGACCTGTGTGCTTTGTGGACTTCCGGTTTGTGCCGTTG
CTAGACGAAGAGGAAGCTGAGATGGAGATAGGAGCAGAAAGCGAATAG

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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