Fungal Genomics

at Utrecht University

General Properties

Protein ID	Pro_DTO081F9_2\|g6818.t1
Gene name
Location	scaffold_12:155687..157182
Strand	-
Gene length (bp)	1495
Transcript length (bp)	1263
Coding sequence length (bp)	1263
Protein length (aa)	421

Overview

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF00331	Glyco_hydro_10	Glycosyl hydrolase family 10	3.2E-105	24	336
PF00734	CBM_1	Fungal cellulose binding domain	1.9E-12	389	416

GO

GO Term	Description	Terminal node
GO:0005576	extracellular region	Yes
GO:0005975	carbohydrate metabolic process	Yes
GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	Yes
GO:0030248	cellulose binding	Yes
GO:0030247	polysaccharide binding	No
GO:0005488	binding	No
GO:0030246	carbohydrate binding	No
GO:0009987	cellular process	No
GO:0005575	cellular_component	No
GO:0016798	hydrolase activity, acting on glycosyl bonds	No
GO:0044238	primary metabolic process	No
GO:0003674	molecular_function	No
GO:0110165	cellular anatomical structure	No
GO:0003824	catalytic activity	No
GO:0008150	biological_process	No
GO:0008152	metabolic process	No
GO:0016787	hydrolase activity	No

Deeploc

Deeploc data not available for this genome

SignalP

SignalP signal predicted	Location	Score
Yes	1 - 21	0.999747

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

CAZyme category	Start	End
GH10	25	336

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

(No ortholog data available)

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus Download genbank file of locus (reverse complement) The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein sequence	>Pro_DTO081F9_2\|g6818.t1 MVHFSTIALALASVLPQLTNASGLNTAAVAKGKLYFGSATDNSELTDTAYLAQLSNTDDFGQITPGNAQKWDATE PSQNTFSYTKGDVIANLAATNGQKLRCHTLVWYSQLPSWVSSGSWTNATLLAAMKNHITNVVTHYKGKCYAWDVA NEALNEDGTYRDNVFYQYIGEAYLPIAFATAAAADPDAKLYYNDYNIESAGSKATGAQRIVKLVQQYGAKIDGVG LQAHFIVGSTPSQSAQTTNLAAFTALGVEVAYTELDIRMTLPSTSALLAQQSTDYQNTVAACVANAKCVGVTIWD YTDKYSWVPSTFSGQGAACPWDANLVKKPAYDGILAALGGTASGTSTSSTATVTSTTTSATTTTTSATTTTTSAT TPTTSSGSTTGVPLYGQCGGLGWTGSTTCTSGTCKYSNDWYSQCL*
Coding sequence The DNA sequence that encodes the protein. No UTRs, no introns.	>Pro_DTO081F9_2\|g6818.t1 ATGGTTCACTTCTCCACTATTGCCCTGGCACTGGCCAGTGTTCTTCCTCAGCTGACCAATGCATCCGGATTGAAC ACCGCTGCTGTCGCAAAGGGAAAGCTATACTTCGGATCAGCTACTGATAACTCCGAGTTGACGGATACCGCATAC CTTGCCCAGCTGAGCAACACAGACGACTTTGGACAGATTACACCCGGTAATGCGCAGAAGTGGGATGCAACCGAA CCGTCTCAGAACACCTTTTCCTATACCAAAGGAGATGTCATTGCCAACCTCGCTGCTACGAATGGCCAAAAGCTG CGATGCCATACTCTAGTTTGGTATAGCCAGTTGCCCAGCTGGGTCTCAAGCGGCTCCTGGACGAACGCGACTCTG CTTGCCGCCATGAAGAACCACATCACCAACGTGGTGACTCACTACAAAGGCAAATGCTATGCTTGGGATGTTGCC AACGAAGCTCTCAACGAGGACGGCACCTACCGTGACAACGTCTTCTACCAATACATCGGCGAGGCATACCTTCCC ATCGCATTCGCTACAGCAGCCGCCGCAGACCCAGACGCCAAGCTCTACTACAACGACTACAACATCGAATCCGCC GGGTCCAAGGCAACAGGTGCCCAGAGAATCGTCAAGCTGGTACAGCAGTACGGCGCCAAGATTGACGGTGTCGGT CTACAAGCACATTTTATCGTCGGAAGTACCCCTAGCCAGAGCGCGCAGACTACCAATCTGGCCGCGTTCACGGCC CTGGGCGTCGAAGTTGCCTATACTGAGCTTGATATCCGGATGACTCTCCCGTCGACTTCGGCCCTGCTTGCGCAG CAGTCGACCGATTACCAGAACACCGTTGCGGCTTGTGTGGCAAATGCTAAGTGTGTGGGCGTTACTATTTGGGAC TACACGGACAAGTACTCGTGGGTTCCTAGTACATTCTCTGGTCAGGGTGCTGCGTGTCCTTGGGATGCGAATCTG GTGAAGAAGCCGGCTTATGATGGTATCTTGGCTGCTTTGGGTGGTACAGCTTCTGGTACTTCCACTTCCTCTACG GCTACCGTTACCAGCACGACTACCTCTGCTACCACCACGACTACCTCTGCTACCACCACGACTACCTCTGCTACC ACCCCGACTACCAGCTCTGGTAGCACTACTGGTGTCCCTCTCTATGGTCAGTGTGGTGGGTTGGGCTGGACTGGA AGCACAACTTGCACAAGTGGAACCTGTAAATACTCCAATGACTGGTACTCGCAGTGCCTATAG
Transcript sequence The DNA sequence that encodes the protein, plus any UTRs. No introns.	>Pro_DTO081F9_2\|g6818.t1 ATGGTTCACTTCTCCACTATTGCCCTGGCACTGGCCAGTGTTCTTCCTCAGCTGACCAATGCATCCGGATTGAAC ACCGCTGCTGTCGCAAAGGGAAAGCTATACTTCGGATCAGCTACTGATAACTCCGAGTTGACGGATACCGCATAC CTTGCCCAGCTGAGCAACACAGACGACTTTGGACAGATTACACCCGGTAATGCGCAGAAGTGGGATGCAACCGAA CCGTCTCAGAACACCTTTTCCTATACCAAAGGAGATGTCATTGCCAACCTCGCTGCTACGAATGGCCAAAAGCTG CGATGCCATACTCTAGTTTGGTATAGCCAGTTGCCCAGCTGGGTCTCAAGCGGCTCCTGGACGAACGCGACTCTG CTTGCCGCCATGAAGAACCACATCACCAACGTGGTGACTCACTACAAAGGCAAATGCTATGCTTGGGATGTTGCC AACGAAGCTCTCAACGAGGACGGCACCTACCGTGACAACGTCTTCTACCAATACATCGGCGAGGCATACCTTCCC ATCGCATTCGCTACAGCAGCCGCCGCAGACCCAGACGCCAAGCTCTACTACAACGACTACAACATCGAATCCGCC GGGTCCAAGGCAACAGGTGCCCAGAGAATCGTCAAGCTGGTACAGCAGTACGGCGCCAAGATTGACGGTGTCGGT CTACAAGCACATTTTATCGTCGGAAGTACCCCTAGCCAGAGCGCGCAGACTACCAATCTGGCCGCGTTCACGGCC CTGGGCGTCGAAGTTGCCTATACTGAGCTTGATATCCGGATGACTCTCCCGTCGACTTCGGCCCTGCTTGCGCAG CAGTCGACCGATTACCAGAACACCGTTGCGGCTTGTGTGGCAAATGCTAAGTGTGTGGGCGTTACTATTTGGGAC TACACGGACAAGTACTCGTGGGTTCCTAGTACATTCTCTGGTCAGGGTGCTGCGTGTCCTTGGGATGCGAATCTG GTGAAGAAGCCGGCTTATGATGGTATCTTGGCTGCTTTGGGTGGTACAGCTTCTGGTACTTCCACTTCCTCTACG GCTACCGTTACCAGCACGACTACCTCTGCTACCACCACGACTACCTCTGCTACCACCACGACTACCTCTGCTACC ACCCCGACTACCAGCTCTGGTAGCACTACTGGTGTCCCTCTCTATGGTCAGTGTGGTGGGTTGGGCTGGACTGGA AGCACAACTTGCACAAGTGGAACCTGTAAATACTCCAATGACTGGTACTCGCAGTGCCTATAG
Gene sequence The DNA sequence that encodes the protein, plus any UTRs and introns.	>Pro_DTO081F9_2\|g6818.t1 ATGGTTCACTTCTCCACTATTGCCCTGGCACTGGCCAGTGTTCTTCCTCAGCTGTATGGTTGATCTTCCAATTCC CAGCACGGTGGCAGTTGATAGTGACTAATGCCCATTCTCAATAGGACCAATGCATCCGGATTGAACACCGCTGCT GTCGCAAAGGGAAAGCTATACTTCGGATCAGCTACTGATAACTCCGAGTTGACGGATACCGCATACCTTGCCCAG CTGAGCAACACAGACGACTTTGGACAGATTACACCCGGTAATGCGCAGAAGGTTGGGCTGGTCTTAGCGTAATAT TCAAACATCGCTAATCGTCGCTAGTGGGATGCAACCGAACCGTCTCAGAACACCTTTTCCTATACCAAAGGAGAT GTCATTGCCAACCTCGCTGCTACGAATGGCCAAAAGCTGCGATGCCATACTCTAGTTTGGTATAGCCAGTTGCCC AGCTGGGGTAAGTTCTGTTATCTCATGTCTTTCAATGCGGGAATATCCATCTAATGATAACCAGTCTCAAGCGGC TCCTGGACGAACGCGACTCTGCTTGCCGCCATGAAGAACCACATCACCAACGTGGTGACTCACTACAAAGGCAAA TGCTATGCTTGGGATGTTGCCAACGAAGGTCAGTGCCGAACTAGGAACGAATCATATCATCACAAGTCGCCTAAT TTATGGACTACTAGCTCTCAACGAGGACGGCACCTACCGTGACAACGTCTTCTACCAATACATCGGCGAGGCATA CCTTCCCATCGCATTCGCTACAGCAGCCGCCGCAGACCCAGACGCCAAGCTCTACTACAACGACTACAACATCGA ATCCGCCGGGTCCAAGGCAACAGGTGCCCAGAGAATCGTCAAGCTGGTACAGCAGTACGGCGCCAAGATTGACGG TGTCGGTCTACAAGCACATTTTATCGTCGGAAGTACCCCTAGCCAGAGCGCGCAGACTACCAATCTGGCCGCGTT CACGGCCCTGGGCGTCGAAGTTGCCTATACTGAGCTTGATATCCGGATGACTCTCCCGTCGACTTCGGCCCTGCT TGCGCAGCAGTCGACCGATTACCAGAACACCGTTGCGGCTTGTGTGGCAAATGCTAAGTGTGTGGGCGTTACTAT TTGGGACTACACGGACAAGTACTCGTGGGTTCCTAGTACATTCTCTGGTCAGGGTGCTGCGTGTCCTTGGGATGC GAATCTGGTGAAGAAGCCGGCTTATGATGGTATCTTGGCTGCTTTGGGTGGTACAGCTTCTGGTACTTCCACTTC CTCTACGGCTACCGTTACCAGCACGACTACCTCTGCTACCACCACGACTACCTCTGCTACCACCACGACTACCTC TGCTACCACCCCGACTACCAGCTCTGGTAGCACTACTGGTGTCCCTCTCTATGGTCAGTGTGGTGGGTTGGGCTG GACTGGAAGCACAACTTGCACAAGTGGAACCTGTAAATACTCCAATGACTGGTACTCGCAGTGCCTATAG