© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Pro_DTO070G2_2|g9600.t1 |
| Gene name | |
| Location | scaffold_30:58624..61762 |
| Strand | - |
| Gene length (bp) | 3138 |
| Transcript length (bp) | 2016 |
| Coding sequence length (bp) | 2016 |
| Protein length (aa) | 672 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00443 | UCH | Ubiquitin carboxyl-terminal hydrolase | 1.8E-21 | 77 | 386 |
| PF13423 | UCH_1 | Ubiquitin carboxyl-terminal hydrolase | 2.0E-06 | 196 | 363 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0004843 | cysteine-type deubiquitinase activity | Yes |
| GO:0016579 | protein deubiquitination | Yes |
| GO:0019538 | protein metabolic process | No |
| GO:0003824 | catalytic activity | No |
| GO:0044238 | primary metabolic process | No |
| GO:1901564 | organonitrogen compound metabolic process | No |
| GO:0101005 | deubiquitinase activity | No |
| GO:0008234 | cysteine-type peptidase activity | No |
| GO:0019783 | ubiquitin-like protein peptidase activity | No |
| GO:0036211 | protein modification process | No |
| GO:0043412 | macromolecule modification | No |
| GO:0008152 | metabolic process | No |
| GO:0008150 | biological_process | No |
| GO:0006807 | nitrogen compound metabolic process | No |
| GO:0003674 | molecular_function | No |
| GO:0043170 | macromolecule metabolic process | No |
| GO:0016787 | hydrolase activity | No |
| GO:0008233 | peptidase activity | No |
| GO:0140096 | catalytic activity, acting on a protein | No |
| GO:0071704 | organic substance metabolic process | No |
| GO:0070646 | protein modification by small protein removal | No |
| GO:0070647 | protein modification by small protein conjugation or removal | No |
| GO:0006508 | proteolysis | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| Yes | 1 - 19 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Pro_DTO070G2_2|g9600.t1 MDASGFLLYLTISVGSSASAPVAPNRLNWGSALNVLEEEEEEEVEASTAQRGRSDEEKMRTVIPKHWHPALPNKT TVGLPNARVDCYRNVVFQMLLHMPILHNWLIWYMNHHAPRGYVCKMGEDFRRCQVCELAEVFQSYWANETRNWIY TFRYLARTILLKWKPNGENSEQDPAEYFVKVYNAIKEGIRPMMKGDFEDMFEVGIIQRRECAGENPCAPRYTPSQ QPVMLLPFSEHNTLPARPTLGDVVKQYFENVDDLGTCPDCGGKKTSNDRIGRFPELLVIQLNRANDFGQKIQTHV YLTEQLNIETRFMDERWGNERKVVRYKLTSMVLHFGQHVQSGHYMIAVKGKGGQWSMANDTQVNDWDPEGPESSL DYPATCYLFTYRRLPTEDEAEKIPDDEAIQADSGLCSDDDVFENVDPGLGLPPVPENTVVKIPENTVFENSVFEK SVFGNSIFGNSVFGSSVPENSVPESGASVWGVDPRTLEKLLEVIIPKAVDTYIARSADARHKEWDQWSKEWAKEW EKRRTAEGANTTAKGANTTAEGANKSAICPGCDKDMVNWQKQRGRLQVTLTENQGNGEKILDLEVQGLHYNRLKR KVGKEADKAEESAITKVIKKKLKSTAKGDEETETEKGKGKAKPKVKDTAKGDEEKGKGKAKGKAKTKGKKK* |
| Coding | >Pro_DTO070G2_2|g9600.t1 ATGGATGCGAGTGGGTTTCTCTTATATCTCACTATATCCGTAGGATCATCTGCTTCAGCTCCAGTGGCGCCCAAC CGTTTGAATTGGGGCAGTGCGCTCAACGTCCTAGAGGAAGAGGAAGAGGAGGAAGTCGAAGCCTCAACAGCGCAA AGGGGAAGATCAGACGAAGAGAAAATGAGAACCGTCATCCCCAAACATTGGCATCCAGCCTTGCCCAATAAGACC ACCGTGGGCTTGCCCAATGCCCGGGTTGACTGCTATCGAAATGTCGTCTTCCAAATGCTTCTGCATATGCCGATT CTTCACAATTGGCTCATCTGGTATATGAACCACCATGCCCCTAGGGGTTACGTTTGCAAGATGGGTGAAGATTTC CGCAGATGCCAAGTTTGCGAACTTGCCGAGGTCTTCCAAAGTTATTGGGCAAATGAAACTAGAAATTGGATCTAT ACCTTTAGATATCTAGCAAGGACGATCTTACTTAAGTGGAAACCAAACGGCGAGAATTCGGAACAAGACCCAGCA GAGTACTTTGTGAAAGTTTACAATGCCATCAAAGAGGGCATCAGGCCTATGATGAAAGGAGACTTCGAAGATATG TTCGAGGTCGGAATCATCCAGAGGAGAGAATGTGCTGGGGAAAACCCCTGTGCCCCAAGATACACCCCGAGCCAG CAACCGGTCATGCTGCTCCCATTTTCAGAGCACAACACACTCCCCGCCAGGCCTACTTTGGGCGATGTAGTCAAA CAATACTTTGAAAATGTAGACGATCTCGGTACATGTCCGGACTGTGGAGGCAAGAAGACATCCAACGACCGAATT GGACGTTTTCCTGAGCTTCTCGTGATCCAGCTCAACCGCGCCAATGATTTTGGCCAAAAGATCCAAACCCACGTA TATCTGACCGAGCAGTTAAATATCGAGACACGGTTCATGGATGAACGCTGGGGCAACGAACGAAAAGTCGTCCGG TATAAACTGACCTCGATGGTCTTGCATTTTGGCCAGCATGTACAATCAGGTCATTACATGATCGCTGTCAAAGGT AAAGGAGGTCAATGGTCTATGGCGAATGACACTCAAGTCAATGACTGGGACCCCGAAGGACCCGAGAGCAGCCTG GACTATCCCGCTACCTGTTATCTCTTTACATACCGCCGGTTACCCACGGAAGACGAGGCAGAGAAAATCCCAGAT GACGAGGCCATTCAGGCCGACTCCGGTTTATGCTCGGACGATGATGTGTTTGAGAATGTTGATCCTGGCCTAGGA TTACCTCCGGTCCCTGAGAATACTGTCGTTAAGATCCCTGAGAACACTGTCTTTGAGAATTCTGTCTTTGAGAAG TCTGTCTTTGGGAATTCTATCTTTGGGAACTCTGTCTTTGGGAGCTCTGTCCCTGAGAACTCTGTCCCTGAGTCA GGCGCCAGTGTCTGGGGAGTTGATCCCAGGACATTGGAGAAGTTACTGGAGGTGATCATTCCCAAGGCCGTCGAT ACCTATATAGCCCGCTCAGCGGATGCGAGGCACAAGGAGTGGGATCAATGGTCGAAGGAATGGGCGAAGGAATGG GAGAAGAGAAGAACAGCCGAAGGAGCGAACACAACAGCCAAAGGAGCGAACACAACAGCCGAAGGAGCGAACAAA TCTGCTATTTGCCCTGGTTGCGACAAGGATATGGTCAATTGGCAGAAGCAACGAGGAAGACTTCAGGTAACTTTG ACTGAAAATCAGGGGAATGGGGAAAAGATCCTAGACCTCGAAGTTCAAGGTCTACACTACAATCGACTCAAGAGG AAGGTGGGCAAGGAAGCCGATAAGGCAGAAGAGTCAGCAATTACCAAGGTGATAAAAAAAAAGTTGAAGAGCACA GCGAAGGGAGATGAAGAGACGGAGACGGAGAAGGGGAAGGGAAAGGCCAAGCCAAAGGTGAAGGATACAGCAAAG GGAGATGAAGAGAAGGGGAAGGGAAAGGCCAAGGGAAAGGCGAAGACGAAGGGAAAGAAGAAGTAG |
| Transcript | >Pro_DTO070G2_2|g9600.t1 ATGGATGCGAGTGGGTTTCTCTTATATCTCACTATATCCGTAGGATCATCTGCTTCAGCTCCAGTGGCGCCCAAC CGTTTGAATTGGGGCAGTGCGCTCAACGTCCTAGAGGAAGAGGAAGAGGAGGAAGTCGAAGCCTCAACAGCGCAA AGGGGAAGATCAGACGAAGAGAAAATGAGAACCGTCATCCCCAAACATTGGCATCCAGCCTTGCCCAATAAGACC ACCGTGGGCTTGCCCAATGCCCGGGTTGACTGCTATCGAAATGTCGTCTTCCAAATGCTTCTGCATATGCCGATT CTTCACAATTGGCTCATCTGGTATATGAACCACCATGCCCCTAGGGGTTACGTTTGCAAGATGGGTGAAGATTTC CGCAGATGCCAAGTTTGCGAACTTGCCGAGGTCTTCCAAAGTTATTGGGCAAATGAAACTAGAAATTGGATCTAT ACCTTTAGATATCTAGCAAGGACGATCTTACTTAAGTGGAAACCAAACGGCGAGAATTCGGAACAAGACCCAGCA GAGTACTTTGTGAAAGTTTACAATGCCATCAAAGAGGGCATCAGGCCTATGATGAAAGGAGACTTCGAAGATATG TTCGAGGTCGGAATCATCCAGAGGAGAGAATGTGCTGGGGAAAACCCCTGTGCCCCAAGATACACCCCGAGCCAG CAACCGGTCATGCTGCTCCCATTTTCAGAGCACAACACACTCCCCGCCAGGCCTACTTTGGGCGATGTAGTCAAA CAATACTTTGAAAATGTAGACGATCTCGGTACATGTCCGGACTGTGGAGGCAAGAAGACATCCAACGACCGAATT GGACGTTTTCCTGAGCTTCTCGTGATCCAGCTCAACCGCGCCAATGATTTTGGCCAAAAGATCCAAACCCACGTA TATCTGACCGAGCAGTTAAATATCGAGACACGGTTCATGGATGAACGCTGGGGCAACGAACGAAAAGTCGTCCGG TATAAACTGACCTCGATGGTCTTGCATTTTGGCCAGCATGTACAATCAGGTCATTACATGATCGCTGTCAAAGGT AAAGGAGGTCAATGGTCTATGGCGAATGACACTCAAGTCAATGACTGGGACCCCGAAGGACCCGAGAGCAGCCTG GACTATCCCGCTACCTGTTATCTCTTTACATACCGCCGGTTACCCACGGAAGACGAGGCAGAGAAAATCCCAGAT GACGAGGCCATTCAGGCCGACTCCGGTTTATGCTCGGACGATGATGTGTTTGAGAATGTTGATCCTGGCCTAGGA TTACCTCCGGTCCCTGAGAATACTGTCGTTAAGATCCCTGAGAACACTGTCTTTGAGAATTCTGTCTTTGAGAAG TCTGTCTTTGGGAATTCTATCTTTGGGAACTCTGTCTTTGGGAGCTCTGTCCCTGAGAACTCTGTCCCTGAGTCA GGCGCCAGTGTCTGGGGAGTTGATCCCAGGACATTGGAGAAGTTACTGGAGGTGATCATTCCCAAGGCCGTCGAT ACCTATATAGCCCGCTCAGCGGATGCGAGGCACAAGGAGTGGGATCAATGGTCGAAGGAATGGGCGAAGGAATGG GAGAAGAGAAGAACAGCCGAAGGAGCGAACACAACAGCCAAAGGAGCGAACACAACAGCCGAAGGAGCGAACAAA TCTGCTATTTGCCCTGGTTGCGACAAGGATATGGTCAATTGGCAGAAGCAACGAGGAAGACTTCAGGTAACTTTG ACTGAAAATCAGGGGAATGGGGAAAAGATCCTAGACCTCGAAGTTCAAGGTCTACACTACAATCGACTCAAGAGG AAGGTGGGCAAGGAAGCCGATAAGGCAGAAGAGTCAGCAATTACCAAGGTGATAAAAAAAAAGTTGAAGAGCACA GCGAAGGGAGATGAAGAGACGGAGACGGAGAAGGGGAAGGGAAAGGCCAAGCCAAAGGTGAAGGATACAGCAAAG GGAGATGAAGAGAAGGGGAAGGGAAAGGCCAAGGGAAAGGCGAAGACGAAGGGAAAGAAGAAGTAG |
| Gene | >Pro_DTO070G2_2|g9600.t1 ATGGATGCGAGTGGGTTTCTCTTATATCTCACTATGTATGTACCTACCACTAGCCACATATGCACTGTGAACGGA GAATTAACTGTTCCACTTAGATCCGTAGGATCATCTGCTTCAGCTCCAGTGGCGCCCAACCGTTTGAATTGGGGC AGTGCGCTCAACGGTGGATCTTCGGTAGATGGGGAGGAACCCTGCTGTCAACACTCCCTACGGAGTACACTATTT TGCTATGGATCATCGGGGGAGGCCATATTTGTTCCGAAAGTGGATGTATCTCAAATATGTACGTATACTAACACA AAGTACAGAGAGGCACAGAGAAGATCCCGACAAGAGAAGGAGCACGGTATAGCTTTCGGCCGGACCTCTTGATAT TCCATGGCCAATCATCAGCCTGGAGATTTCTATTTCATTTGGCTCCACATCTGAAACAGCTGCTGTGTGGTCAAG TCCCTTCTAGACACTAGACACTTTAGGTGGAACGCGGTTCATTTGCACGGAGTATTTCTCCTACACTTGCTCCAT ATGTTGTAGTAGACTTAAGATTATCGGTCTCGAACATTCTTCTGCAAAAACCGGGGGAACACGGCCAGCAAGGAA ATTGGCTGATTCCAGCCCGTTTATGGTCCCATTGGGCCCTGGGATCTGACTGGGAAGTTCACCGAGATATCCTGG GAAGCTGATTTCAGAGATGCAGTACATTTTTTTCATCTCTCTTTGAATATGTTCTATGTGTGTGAACAGCCCGCT ATTTATAGATGGTTTCTTTGTTGTGGATGTAAGTCGGCTTGGGATCTGGTAAATGGAACAGCTCAAAGTCTGTGA AGGAACAAAATAATCAAGTGTAAGTGGGATGGGGGTTGAATGAAAGTTGAATGAATGTCTCGAGAGTTCAGTAGA GTTCTTGCCTTTCTTTGATCACCATATCCCTGATTCATTGGTTCCATCATGCATTCAAAGAATTCCCAATCGATG CCACATTTTCCTTGGAGATGAGAACAATGAAAATCAGTTGCAATGCGAGATAAATTAGACTGCGACCCCCTCAAG TGAGCAACAGCTTCACATATTGATTCATTTCATATTCTATCATGGCCAAAACTAAACAAGTCCCAAAGAAAGTCC TAGAGGAAGAGGAAGAGGAGGAAGTCGAAGCCTCAACAGCGCAAAGGGGAAGATCAGACGAAGAGAAAATGAGAG TGAGTGTAGCCAACCTCTACATCAACAAGTCTAACAAGAGAGATAGACCGTCATCCCCAAACATTGGCATCCAGC CTTGCCCAATAAGACCACCGTGGGCTTGCCCAATGCCCGGGTTGACTGCTATCGAAATGTCGTCTTCCAAATGCT TCTGCATATGCCGATTCTTCACAATTGGCTCATCTGGTATATGAACCACCATGCCCCTAGGGGTTACGTTTGCAA GATGGGTGAAGATTTCCGCAGATGCCAAGTTTGCGAACTTGCCGAGGTCTTCCAAAGTTATTGGGCAAATGAAAC TAGAAATTGGATCTATACCTTTAGATATCTAGCAAGGACGATCTTACTTAAGTGGAAACCAAACGGCGAGAATTC GGAACAAGACCCAGCAGAGTACTTTGTGAAAGTTTACAATGCCATCAAAGAGGGCATCAGGCCTATGATGTATGT TATTCTCTCCATATTCCCCCTACACGCAGAAGACTGACTTGAGACTCCAGGAAAGGAGACTTCGAAGATATGTTC GAGGTCGGAATCATCCAGAGGAGAGAATGTGCTGGGGAAAACCCCTGTGCCCCAAGATACACCCCGAGCCAGCAA CCGGTCATGCTGCTCCCATTTTCAGAGCACAACACACTCCCCGCCAGGCCTACTTTGGGCGATGTAGTCAAACAA TACTTTGAAAATGTAGACGATCTCGGTACATGTCCGGACTGTGGAGGCAAGAAGACATCCAACGACCGAATTGGA CGTTTTCCTGAGCTTCTCGTGATCCAGCTCAACCGCGCCAATGATTTTGGCCAAAAGATCCAAACCCACGTATAT CTGACCGAGCAGTTAAATATCGAGACACGGTTCATGGATGAACGCTGGGGCAACGAACGAAAAGTCGTCCGGTAT AAACTGACCTCGATGGTCTTGCATTTTGGCCAGCATGTACAATCAGGTCATTACATGATCGCTGTCAAAGGTAAA GGAGGTCAATGGTCTATGGCGAATGACACTCAAGTCAATGACTGGGACCCCGAAGGACCCGAGAGCAGCCTGGAC TATCCCGCTACCTGTTATCTCTTTACATACCGCCGGTTACCCACGGAAGACGAGGCAGAGAAAATCCCAGATGAC GAGGCCATTCAGGCCGACTCCGGTTTATGCTCGGACGATGATGTGTTTGAGAATGTTGATCCTGGCCTAGGATTA CCTCCGGTCCCTGAGAATACTGTCGTTAAGATCCCTGAGAACACTGTCTTTGAGAATTCTGTCTTTGAGAAGTCT GTCTTTGGGAATTCTATCTTTGGGAACTCTGTCTTTGGGAGCTCTGTCCCTGAGAACTCTGTCCCTGAGTCAGGC GCCAGTGTCTGGGGAGTTGATCCCAGGACATTGGAGAAGTTACTGGAGGTGATCATTCCCAAGGCCGTCGATACC TATATAGCCCGCTCAGCGGATGCGAGGCACAAGGAGTGGGATCAATGGTCGAAGGAATGGGCGAAGGAATGGGAG AAGAGAAGAACAGCCGAAGGAGCGAACACAACAGCCAAAGGAGCGAACACAACAGCCGAAGGAGCGAACAAATCT GCTATTTGCCCTGGTTGCGACAAGGATATGGTCAATTGGCAGAAGCAACGAGGAAGACTTCAGGTAACTTTGACT GAAAATCAGGGGAATGGGGAAAAGATCCTAGACCTCGAAGTTCAAGGTCTACACTACAATCGACTCAAGAGGAAG GTGGGCAAGGAAGCCGATAAGGCAGAAGAGTCAGCAATTACCAAGGTGATAAAAAAAAAGTTGAAGAGCACAGCG AAGGGAGATGAAGAGACGGAGACGGAGAAGGGGAAGGGAAAGGCCAAGCCAAAGGTGAAGGATACAGCAAAGGGA GATGAAGAGAAGGGGAAGGGAAAGGCCAAGGGAAAGGCGAAGACGAAGGGAAAGAAGAAGTAG |