© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Pro_DTO070G2_2|g9552.t1 |
| Gene name | |
| Location | scaffold_29:128828..130854 |
| Strand | + |
| Gene length (bp) | 2026 |
| Transcript length (bp) | 1644 |
| Coding sequence length (bp) | 1644 |
| Protein length (aa) | 548 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF07690 | MFS_1 | Major Facilitator Superfamily | 6.2E-34 | 78 | 448 |
| PF00083 | Sugar_tr | Sugar (and other) transporter | 6.4E-13 | 99 | 249 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0016021 | integral component of membrane | Yes |
| GO:0006810 | transport | No |
| GO:0005215 | transporter activity | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0005575 | cellular_component | No |
| GO:0051179 | localization | No |
| GO:0009987 | cellular process | No |
| GO:0003674 | molecular_function | No |
| GO:0031224 | intrinsic component of membrane | No |
| GO:0051234 | establishment of localization | No |
| GO:0008150 | biological_process | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 33 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 70 | 92 | 22 |
| 2 | 107 | 129 | 22 |
| 3 | 136 | 155 | 19 |
| 4 | 166 | 188 | 22 |
| 5 | 195 | 217 | 22 |
| 6 | 222 | 244 | 22 |
| 7 | 324 | 346 | 22 |
| 8 | 366 | 388 | 22 |
| 9 | 409 | 430 | 21 |
| 10 | 440 | 462 | 22 |
| 11 | 469 | 491 | 22 |
| 12 | 506 | 528 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Pro_DTO070G2_2|g9552.t1 MASCPTEIDDKREFGEKDNQNDDVDPTNTPMEGTQVLHNAAVDKNGIRLHPQPTSDPLDPLNWSSLQKNGILSIV MFKYFLFTYLTTTTVPSFPEIQDQYSINYSQVNWTVAVPALGLSVGPLIWSSLGEIFGRRVVFLVGTTISLASTI GAAGADSYSGYMAARFFQGFGVSPASTVGMAVVTDLFYDYERGQKLGLWVLAIDAGLLLGPTFGGFLDLVSAPWI NWFNAILFATLLLLELFFMPETLYPRNKMLQQMPRLDGNKALPSDVEKQIAGDETATSMSPETLPSELRRTKNLP FINWRPIPGMRHPKPWDSITRFVLTFQLSTVVIAVVGFSFVWYWWVLSVITMVPAAYPNYTPLIQGLLFLGLFLG TVLSEIGCSGRLSDFIVEKLAKRNGNIRVPEMRLWLAYPAILITTVGLVVWGISIDKNYHWMVGQVAFFLFAAGI QIGNTVTSSYIVDCYPLQTTSVITFYAVFLNLSAFINPFFIANWQASSGWTWTFTAQGLIVLGGGFLVFGGLHMF GAWMRAKAPQPSWVNPEFDMDP* |
| Coding | >Pro_DTO070G2_2|g9552.t1 ATGGCATCTTGCCCAACAGAAATCGATGACAAACGCGAGTTTGGAGAAAAAGACAACCAAAACGACGATGTCGAC CCAACCAATACTCCCATGGAGGGCACTCAAGTCCTTCACAATGCAGCCGTCGACAAGAACGGAATCAGACTTCAC CCCCAGCCAACATCAGACCCCCTAGATCCATTAAATTGGTCAAGCCTCCAGAAAAATGGCATACTATCTATCGTT ATGTTCAAATATTTCCTATTCACATACCTCACAACCACCACAGTTCCATCATTTCCAGAGATTCAAGATCAATAC TCGATCAACTATTCGCAAGTCAACTGGACAGTCGCCGTGCCAGCATTAGGATTATCCGTCGGACCACTCATATGG TCATCCCTTGGTGAGATCTTTGGCCGAAGGGTGGTGTTCTTAGTCGGGACAACCATATCACTGGCCTCGACCATT GGGGCTGCTGGAGCTGATAGCTATTCGGGCTATATGGCTGCTCGCTTCTTCCAAGGATTTGGAGTGAGCCCAGCA TCTACAGTCGGAATGGCAGTCGTGACCGATCTGTTCTATGATTATGAGCGTGGTCAGAAGCTTGGCTTGTGGGTT CTAGCAATTGATGCTGGTCTGCTTCTAGGTCCTACCTTTGGCGGCTTTTTGGATCTCGTCAGTGCCCCATGGATA AACTGGTTCAACGCAATCCTCTTTGCAACACTACTACTTCTCGAACTCTTCTTCATGCCGGAGACCCTCTACCCC CGCAACAAGATGCTTCAGCAAATGCCCCGTCTTGACGGCAACAAAGCTCTCCCGAGTGATGTTGAAAAGCAAATA GCAGGAGACGAAACGGCGACATCCATGTCTCCGGAGACCCTACCCTCCGAGCTACGCCGCACAAAGAACCTCCCT TTCATCAATTGGCGTCCTATTCCCGGAATGCGCCATCCCAAGCCGTGGGACTCCATCACTCGGTTTGTATTGACG TTCCAATTATCCACAGTGGTTATCGCAGTTGTCGGATTCAGCTTCGTCTGGTACTGGTGGGTTTTATCTGTTATC ACGATGGTACCGGCAGCGTATCCGAACTACACACCTCTGATCCAGGGACTGCTGTTCCTTGGGCTATTTCTTGGG ACTGTCCTCTCGGAGATTGGGTGCTCTGGGCGATTAAGTGACTTTATTGTCGAGAAGTTGGCGAAGAGGAATGGC AATATCCGCGTTCCGGAGATGCGGTTGTGGCTGGCGTACCCGGCTATATTGATCACCACTGTTGGGTTGGTTGTT TGGGGAATCAGTATCGACAAAAACTACCACTGGATGGTAGGCCAGGTGGCATTCTTCCTATTTGCCGCTGGTATC CAGATCGGAAATACTGTAACCAGCAGCTACATTGTGGACTGCTACCCACTACAAACAACGAGCGTGATCACTTTC TACGCCGTATTTCTGAACCTGAGTGCTTTTATCAATCCGTTCTTCATTGCCAATTGGCAAGCGTCTTCCGGTTGG ACTTGGACATTCACTGCCCAAGGACTTATTGTACTTGGTGGCGGGTTTTTGGTGTTTGGTGGTCTGCATATGTTT GGGGCTTGGATGCGTGCAAAAGCACCACAGCCTTCGTGGGTCAATCCGGAGTTTGATATGGATCCTTGA |
| Transcript | >Pro_DTO070G2_2|g9552.t1 ATGGCATCTTGCCCAACAGAAATCGATGACAAACGCGAGTTTGGAGAAAAAGACAACCAAAACGACGATGTCGAC CCAACCAATACTCCCATGGAGGGCACTCAAGTCCTTCACAATGCAGCCGTCGACAAGAACGGAATCAGACTTCAC CCCCAGCCAACATCAGACCCCCTAGATCCATTAAATTGGTCAAGCCTCCAGAAAAATGGCATACTATCTATCGTT ATGTTCAAATATTTCCTATTCACATACCTCACAACCACCACAGTTCCATCATTTCCAGAGATTCAAGATCAATAC TCGATCAACTATTCGCAAGTCAACTGGACAGTCGCCGTGCCAGCATTAGGATTATCCGTCGGACCACTCATATGG TCATCCCTTGGTGAGATCTTTGGCCGAAGGGTGGTGTTCTTAGTCGGGACAACCATATCACTGGCCTCGACCATT GGGGCTGCTGGAGCTGATAGCTATTCGGGCTATATGGCTGCTCGCTTCTTCCAAGGATTTGGAGTGAGCCCAGCA TCTACAGTCGGAATGGCAGTCGTGACCGATCTGTTCTATGATTATGAGCGTGGTCAGAAGCTTGGCTTGTGGGTT CTAGCAATTGATGCTGGTCTGCTTCTAGGTCCTACCTTTGGCGGCTTTTTGGATCTCGTCAGTGCCCCATGGATA AACTGGTTCAACGCAATCCTCTTTGCAACACTACTACTTCTCGAACTCTTCTTCATGCCGGAGACCCTCTACCCC CGCAACAAGATGCTTCAGCAAATGCCCCGTCTTGACGGCAACAAAGCTCTCCCGAGTGATGTTGAAAAGCAAATA GCAGGAGACGAAACGGCGACATCCATGTCTCCGGAGACCCTACCCTCCGAGCTACGCCGCACAAAGAACCTCCCT TTCATCAATTGGCGTCCTATTCCCGGAATGCGCCATCCCAAGCCGTGGGACTCCATCACTCGGTTTGTATTGACG TTCCAATTATCCACAGTGGTTATCGCAGTTGTCGGATTCAGCTTCGTCTGGTACTGGTGGGTTTTATCTGTTATC ACGATGGTACCGGCAGCGTATCCGAACTACACACCTCTGATCCAGGGACTGCTGTTCCTTGGGCTATTTCTTGGG ACTGTCCTCTCGGAGATTGGGTGCTCTGGGCGATTAAGTGACTTTATTGTCGAGAAGTTGGCGAAGAGGAATGGC AATATCCGCGTTCCGGAGATGCGGTTGTGGCTGGCGTACCCGGCTATATTGATCACCACTGTTGGGTTGGTTGTT TGGGGAATCAGTATCGACAAAAACTACCACTGGATGGTAGGCCAGGTGGCATTCTTCCTATTTGCCGCTGGTATC CAGATCGGAAATACTGTAACCAGCAGCTACATTGTGGACTGCTACCCACTACAAACAACGAGCGTGATCACTTTC TACGCCGTATTTCTGAACCTGAGTGCTTTTATCAATCCGTTCTTCATTGCCAATTGGCAAGCGTCTTCCGGTTGG ACTTGGACATTCACTGCCCAAGGACTTATTGTACTTGGTGGCGGGTTTTTGGTGTTTGGTGGTCTGCATATGTTT GGGGCTTGGATGCGTGCAAAAGCACCACAGCCTTCGTGGGTCAATCCGGAGTTTGATATGGATCCTTGA |
| Gene | >Pro_DTO070G2_2|g9552.t1 ATGGCATCTTGCCCAACAGAAATCGATGACAAACGCGAGTTTGGAGAAAAAGACAACCAAAACGACGATGTCGAC CCAACCAATACTCCCATGGAGGGCACTCAAGTCCTTCACAATGCAGCCGTCGACAAGAACGGAATCAGACTTCAC CCCCAGCCAACATCAGACCCCCTAGATCCATTAAATTGGTCAAGCCTCCAGAAAAATGGCATACTATCTATCGTT ATGTTCAAGTATGTACCAAATCAGCTCCGGGAATTGCTCGACATTGCCAGAAAACAATCTACGTCTTGCTGACAT CTTGCTAACCCTTGTTAGATATTTCCTATTCACATACCTCACAACCACCACAGTTCCATCATTTCCAGAGATTCA AGATCAATACTCGATCAACTATTCGCAAGTCAACTGGACAGTCGCCGTGCCAGCATTAGGATTATCCGTCGGACC ACTCATATGGTCATCCCTTGGTGAGATCTTTGGCCGAAGGGTGGTGTTCTTAGTCGGGACAACCATATCACTGGC CTCGACCATTGGGGCTGCTGGAGCTGATAGCTATTCGGGCTATATGGCTGCTCGCTTCTTCCAAGGATTTGGAGT GAGCCCAGCATCTACAGTCGGAATGGCAGTCGGTATGTCTCAATCATCACCTTCAGACAAGATTTGTATCTGACA TCTAGTTTGACAAAGTGACCGATCTGTTCTATGATTATGAGCGTGGTCAGAAGCTTGGCTTGTGGGTTCTAGCAA TTGATGCTGGTCTGCTTCTAGGTCCTACCTGTAAGTTGTTCGGACAGTTCAAACCACCATGCGTCAAAAGCTAAG ATTTATCACCAGTTGGCGGCTTTTTGGATCTCGTCAGTGCCCCATGGATAAACTGGTTCAACGCAATCCTCTTTG CAACACTACTACTTCTCGAACTCTTCTTCATGCCGGAGACCCTCTACCCCCGCAACAAGATGCTTCAGCAAATGC CCCGTCTTGACGGCAACAAAGCTCTCCCGAGTGATGTTGAAAAGCAAATAGCAGGAGACGAAACGGCGACATCCA TGTCTCCGGAGACCCTACCCTCCGAGCTACGCCGCACAAAGAACCTCCCTTTCATCAATTGGCGTCCTATTCCCG GAATGCGCCATCCCAAGCCGTGGGACTCCATCACTCGGTTTGTATTGACGTTCCAATTATCCACAGTGGTTATCG CAGTTGTCGGATTCAGCTTCGTCTGGTACTGGTGGGTTTTATCTGTTATCACGATGGTACCGGCAGCGTATCCGA ACTACACACCTCTGATCCAGGGACTGCTGTTCCTTGGGCTATTTCTTGGGACTGTCCTCTCGGAGATTGGGTGCT CTGGGCGATTAAGTGACTTTATTGTCGAGAAGTTGGCGAAGAGGAATGGCAATATCCGCGTTCCGGAGATGCGGT TGTGGCTGGCGTACCCGGCTATATTGATCACCACTGGTGTGTTTGACTTGCCAGACTATATGTTGAACTCTACTG ATAATAATAATTATTATAGTTGGGTTGGTTGTTTGGGGAATCAGTATCGACAAAAACTACCACTGGATGGTAGGC CAGGTGGCATTCTTCCTATGTGAGTTCTATCTTCCGGATTATATCATAAAGCATTCGACGCAGTGCTGACAATCC TCTAGTTGCCGCTGGTATCCAGATCGGAAATACTGTAACCAGCAGCTACATTGTGGACTGCTACCCACTACAAAC AACGAGCGTGATCACTTTCTACGCCGTATTTCTGAACCTGAGTGCTTTTATCAATCCGGTATGTTGTCCAATCCA CCTTGATAATGAGCTATTTAGATATTGATAACTGACTTCTTGGTAGTTCTTCATTGCCAATTGGCAAGCGTCTTC CGGTTGGACTTGGACATTCACTGCCCAAGGACTTATTGTACTTGGTGGCGGGTTTTTGGTGTTTGGTGGTCTGCA TATGTTTGGGGCTTGGATGCGTGCAAAAGCACCACAGCCTTCGTGGGTCAATCCGGAGTTTGATATGGATCCTTG A |