Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO070G2_2|g9440.t1
Gene name
Locationscaffold_28:43647..45712
Strand+
Gene length (bp)2065
Transcript length (bp)1692
Coding sequence length (bp)1692
Protein length (aa) 564

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00128 Alpha-amylase Alpha amylase, catalytic domain 1.5E-46 63 363
PF09260 A_amylase_dom_C Alpha-amylase, domain C 2.2E-21 421 517

GO

GO Term Description Terminal node
GO:0004556 alpha-amylase activity Yes
GO:0016052 carbohydrate catabolic process Yes
GO:0005975 carbohydrate metabolic process Yes
GO:0005509 calcium ion binding Yes
GO:0003674 molecular_function No
GO:0044238 primary metabolic process No
GO:0016798 hydrolase activity, acting on glycosyl bonds No
GO:0043169 cation binding No
GO:0016160 amylase activity No
GO:0046872 metal ion binding No
GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds No
GO:0008152 metabolic process No
GO:0008150 biological_process No
GO:0016787 hydrolase activity No
GO:0043167 ion binding No
GO:0009056 catabolic process No
GO:1901575 organic substance catabolic process No
GO:0005488 binding No
GO:0071704 organic substance metabolic process No
GO:0003824 catalytic activity No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 24 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO070G2_2|g9440.t1
MQAPLTMWWWKVLVVAAIGTVHAASRDQWLGRSVYQVVTDRFARSDNSTIAPCVAALGEYCGGSLQGIINKLDYI
QELGFDAVWISPVQSQESTRTADLSAYHGYWPNDLYSINSHFGTSDDLEALSAALHARGMYLMLDIVVGDMAWAG
NASTIDYSKFNPFNDQKYFHDYKLLSEDPVNSTCVLDCWMGDTTISLPDLRNEDQEVQQMLGTWISQLVSNYSID
GLRIDSVLNIPPVFFSNFTKSAGVFTMGEGATRDASGYCSLQPGLPGLLNYPLYYILTEAFNTTDGDLNRIVQSI
DYVRKQCEDVLPLGTFTSNQDVARFGSYTSDISLARNILTISMLADGIPILYYGEEQHLSGGFNPVNREALWLTK
YSMHSTSLPSLVQSLNRIRSYASGDGEKSTVAPKSGVDYLSYLSLPIYNSTNILAMRKGFAGNQVVSVVSNLGAK
PSRKATTKITLGSDGTGFSSGQNVSELLSCKTYVTDSSGNLNVDLSSDGGPRVYYPTESLNRSSNICGDHTRTST
TSAASPKASTGAGVSLFSLSWEMIVTVALTTSFVSIYL*
Coding >Pro_DTO070G2_2|g9440.t1
ATGCAAGCGCCACTGACAATGTGGTGGTGGAAGGTTTTGGTGGTCGCCGCCATTGGGACAGTACATGCGGCATCC
CGAGACCAATGGCTCGGTCGGTCCGTTTACCAAGTGGTCACCGATCGCTTCGCTCGATCCGATAATTCAACCATC
GCTCCTTGTGTTGCAGCTCTGGGAGAGTATTGTGGAGGGAGCTTGCAGGGCATCATCAATAAGCTGGATTACATT
CAGGAACTCGGGTTCGATGCGGTCTGGATCTCTCCAGTGCAGAGCCAGGAGTCAACTCGCACGGCGGATCTCTCA
GCATACCATGGGTATTGGCCAAACGACCTTTATTCCATCAACTCCCATTTTGGCACTTCCGATGACCTCGAAGCG
TTATCCGCGGCATTGCACGCGCGTGGCATGTACTTGATGCTGGATATTGTCGTTGGTGACATGGCCTGGGCTGGA
AATGCCTCCACTATCGACTACAGCAAGTTCAATCCATTCAATGATCAGAAGTATTTCCACGACTACAAGCTACTT
TCTGAGGACCCCGTAAACAGTACCTGTGTTCTGGATTGCTGGATGGGAGACACGACCATATCGCTTCCAGATCTG
CGAAACGAGGATCAGGAAGTCCAGCAGATGCTGGGCACCTGGATTTCGCAGTTGGTTTCCAACTACTCCATTGAT
GGCCTGCGAATCGACAGTGTCTTGAACATTCCCCCCGTCTTCTTCTCCAATTTCACCAAGTCGGCCGGTGTTTTT
ACTATGGGCGAAGGCGCCACAAGAGACGCATCCGGTTACTGTTCTCTACAGCCCGGTCTACCCGGACTTTTGAAT
TATCCGTTGTATTATATCCTCACAGAGGCTTTCAACACGACCGACGGAGACCTGAACAGAATCGTACAGTCTATA
GATTACGTCAGGAAACAGTGCGAGGACGTACTGCCCCTGGGAACTTTCACATCGAATCAGGATGTCGCTCGCTTT
GGCTCGTATACTTCAGACATATCGCTGGCTCGCAACATTCTCACAATCAGCATGCTCGCTGACGGTATCCCCATC
CTCTACTACGGGGAGGAACAGCACCTGTCAGGTGGATTCAATCCTGTCAACCGGGAGGCCCTATGGCTTACCAAA
TACTCAATGCACTCGACCTCCCTACCTTCGCTAGTCCAATCGTTGAATCGCATTAGATCATATGCAAGCGGTGAC
GGAGAAAAGTCTACGGTCGCCCCGAAGTCAGGGGTCGACTATCTATCATACCTCTCATTGCCGATCTACAATTCA
ACAAACATTTTGGCCATGCGCAAGGGATTTGCCGGTAACCAGGTTGTGAGCGTCGTGTCCAACCTGGGAGCCAAG
CCATCCCGCAAAGCTACCACGAAAATCACGCTTGGCTCCGACGGCACAGGATTTTCATCCGGACAGAATGTGAGC
GAGCTCTTGTCTTGCAAAACATATGTGACCGATTCAAGCGGAAATCTCAATGTGGACCTCAGCTCGGATGGAGGG
CCTCGGGTGTATTATCCTACTGAAAGCCTGAACCGAAGCAGCAATATTTGTGGAGATCACACCCGAACATCGACA
ACCTCCGCAGCAAGTCCAAAGGCTTCCACCGGCGCTGGGGTTTCGTTATTCAGCTTGTCGTGGGAGATGATAGTC
ACGGTCGCATTGACCACCTCCTTCGTTTCCATCTATCTCTAG
Transcript >Pro_DTO070G2_2|g9440.t1
ATGCAAGCGCCACTGACAATGTGGTGGTGGAAGGTTTTGGTGGTCGCCGCCATTGGGACAGTACATGCGGCATCC
CGAGACCAATGGCTCGGTCGGTCCGTTTACCAAGTGGTCACCGATCGCTTCGCTCGATCCGATAATTCAACCATC
GCTCCTTGTGTTGCAGCTCTGGGAGAGTATTGTGGAGGGAGCTTGCAGGGCATCATCAATAAGCTGGATTACATT
CAGGAACTCGGGTTCGATGCGGTCTGGATCTCTCCAGTGCAGAGCCAGGAGTCAACTCGCACGGCGGATCTCTCA
GCATACCATGGGTATTGGCCAAACGACCTTTATTCCATCAACTCCCATTTTGGCACTTCCGATGACCTCGAAGCG
TTATCCGCGGCATTGCACGCGCGTGGCATGTACTTGATGCTGGATATTGTCGTTGGTGACATGGCCTGGGCTGGA
AATGCCTCCACTATCGACTACAGCAAGTTCAATCCATTCAATGATCAGAAGTATTTCCACGACTACAAGCTACTT
TCTGAGGACCCCGTAAACAGTACCTGTGTTCTGGATTGCTGGATGGGAGACACGACCATATCGCTTCCAGATCTG
CGAAACGAGGATCAGGAAGTCCAGCAGATGCTGGGCACCTGGATTTCGCAGTTGGTTTCCAACTACTCCATTGAT
GGCCTGCGAATCGACAGTGTCTTGAACATTCCCCCCGTCTTCTTCTCCAATTTCACCAAGTCGGCCGGTGTTTTT
ACTATGGGCGAAGGCGCCACAAGAGACGCATCCGGTTACTGTTCTCTACAGCCCGGTCTACCCGGACTTTTGAAT
TATCCGTTGTATTATATCCTCACAGAGGCTTTCAACACGACCGACGGAGACCTGAACAGAATCGTACAGTCTATA
GATTACGTCAGGAAACAGTGCGAGGACGTACTGCCCCTGGGAACTTTCACATCGAATCAGGATGTCGCTCGCTTT
GGCTCGTATACTTCAGACATATCGCTGGCTCGCAACATTCTCACAATCAGCATGCTCGCTGACGGTATCCCCATC
CTCTACTACGGGGAGGAACAGCACCTGTCAGGTGGATTCAATCCTGTCAACCGGGAGGCCCTATGGCTTACCAAA
TACTCAATGCACTCGACCTCCCTACCTTCGCTAGTCCAATCGTTGAATCGCATTAGATCATATGCAAGCGGTGAC
GGAGAAAAGTCTACGGTCGCCCCGAAGTCAGGGGTCGACTATCTATCATACCTCTCATTGCCGATCTACAATTCA
ACAAACATTTTGGCCATGCGCAAGGGATTTGCCGGTAACCAGGTTGTGAGCGTCGTGTCCAACCTGGGAGCCAAG
CCATCCCGCAAAGCTACCACGAAAATCACGCTTGGCTCCGACGGCACAGGATTTTCATCCGGACAGAATGTGAGC
GAGCTCTTGTCTTGCAAAACATATGTGACCGATTCAAGCGGAAATCTCAATGTGGACCTCAGCTCGGATGGAGGG
CCTCGGGTGTATTATCCTACTGAAAGCCTGAACCGAAGCAGCAATATTTGTGGAGATCACACCCGAACATCGACA
ACCTCCGCAGCAAGTCCAAAGGCTTCCACCGGCGCTGGGGTTTCGTTATTCAGCTTGTCGTGGGAGATGATAGTC
ACGGTCGCATTGACCACCTCCTTCGTTTCCATCTATCTCTAG
Gene >Pro_DTO070G2_2|g9440.t1
ATGCAAGCGCCACTGACAATGTGGTGGTGGAAGGTTTTGGTGGTCGCCGCCATTGGGACAGTACATGCGGCATCC
CGAGACCAATGGCTCGGTCGGTCCGTTTACCAAGTGGTCACCGATCGCTTCGCTCGATCCGATAATTCAACCATC
GCTCCTTGTGTTGCAGCTCTGGGAGAGTATTGTGGAGGGAGCTTGCAGGGCATCATCAATAAGCTGGATTACATT
CAGGAACTCGGGTTCGATGCGGTCTGGATCTCTCCAGTGCAGAGCCAGGAGTCAACTCGCACGGCGGATCTCTCA
GGTATGGTCATATTGACTGTGAACGGATATAGAGAACTAACGATTGATGGATGATAGCATACCATGGGTATTGGC
CAAACGACCTTTATTCCATCAACTCCCATTTTGGCACTTCCGATGACCTCGAAGCGTTATCCGCGGCATTGCACG
CGCGTGGCATGGTGAGTCGCCGGCTGCCATGTCTACTCCCAAAACTGACATATAAAATAGTACTTGATGCTGGAT
ATTGTCGTTGGTGACATGGCCTGGGCTGGAAATGCCTCCACTATCGACTACAGCAAGTTCAATCCATTCAATGAT
CAGAAGTATTTCCACGACTACAAGCTACTTTCTGAGGACCCCGTAAACAGTACCTGTGTTCTGGATGTAAGTCTG
TCATAGCATTTGTGAGAGCATTGCTAAGCCTTTATCAGTGCTGGATGGGAGACACGACCATATCGCTTCCAGATC
TGCGAAACGAGGATCAGGAAGTCCAGCAGATGCTGGGCACCTGGATTTCGCAGTTGGTTTCCAACTACTCCAGTA
TGTCTATGTGTCTCCTATGTCTCCAAGGAATTTAATAACAGTTATTCTTTGTAGTTGATGGCCTGCGAATCGACA
GTGTCTTGAACATTCCCCCCGTCTTCTTCTCCAATTTCACCAAGTCGGCCGGTGTTTTTACTATGGGCGAAGGCG
CCACAAGAGACGCATCCGGTTACTGTTCTCTACAGCCCGGTCTACCCGGACTTTTGAATTATCCGTTGTGAGTAC
CTCATCAAAATGAACGGAGGGCGTGTTGACACTTTTAGGTATTATATCCTCACAGAGGCTTTCAACACGACCGAC
GGAGACCTGAACAGAATCGTACAGTCTATAGATTACGTCAGGAAACAGTGCGAGGACGTACTGCCCCTGGGAACT
TTCACATCGAATCAGGATGTCGCTCGCTTTGGCTCGTATACTTCAGACATATCGGTAAGTCGAGTGCATCGGGTA
TTTTGTCAGCACGCATTGACTTTGTCGCTCCCGATTAGCTGGCTCGCAACATTCTCACAATCAGCATGCTCGCTG
ACGGTATCCCCATCCGTATGTTGTGCCCCCTCGAACAGAAACGAAAGCCAACGATACTAATAAACGCAACACAGT
CTACTACGGGGAGGAACAGCACCTGTCAGGTGGATTCAATCCTGTCAACCGGGAGGCCCTATGGCTTACCAAATA
CTCAATGCACTCGACCTCCCTACCTTCGCTAGTCCAATCGTTGAATCGCATTAGATCATATGCAAGCGGTGACGG
AGAAAAGTCTACGGTCGCCCCGAAGTCAGGGGTCGACTATCTATCATACCTCTCATTGCCGATCTACAATTCAAC
AAACATTTTGGCCATGCGCAAGGGATTTGCCGGTAACCAGGTTGTGAGCGTCGTGTCCAACCTGGGAGCCAAGCC
ATCCCGCAAAGCTACCACGAAAATCACGCTTGGCTCCGACGGCACAGGATTTTCATCCGGACAGAATGTGAGCGA
GCTCTTGTCTTGCAAAACATATGTGACCGATTCAAGCGGAAATCTCAATGTGGACCTCAGCTCGGATGGAGGGCC
TCGGGTGTATTATCCTACTGAAAGCCTGAACCGAAGCAGCAATATTTGTGGAGATCACACCCGAACATCGACAAC
CTCCGCAGCAAGTCCAAAGGCTTCCACCGGCGCTGGGGTTTCGTTATTCAGCTTGTCGTGGGAGATGATAGTCAC
GGTCGCATTGACCACCTCCTTCGTTTCCATCTATCTCTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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