Protein ID | Pro_DTO070G2_2|g9307.t1 |
Gene name | |
Location | scaffold_26:168232..169805 |
Strand | + |
Gene length (bp) | 1573 |
Transcript length (bp) | 1509 |
Coding sequence length (bp) | 1509 |
Protein length (aa) | 503 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF07915 | PRKCSH | Glucosidase II beta subunit-like protein | 5.9E-18 | 151 | 240 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
Yes | 1 - 23 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Pro_DTO070G2_2|g9307.t1 MGHSASLAPWLVLACAVSSTWANKKPFNINDDILAYPQYQVTFPEEYVLESHAEALLRSEASPGANDQNNPQVYI GKDRTDSTAQPEDTNVSLFTYEEMILENRRLLCQIPRVTNDDHNTTRDKEDSKAEEQKELARATDRGLELLREME GKCMYYFSGWWSYSFCYQKQIKQFHALPAGRGIPNYPPIEDTQTHSFVLGKFIGDKGEGEKQSAQTDVAELHTQG GSRYLVQHLRGGTKCDLTGRERKVEVQFHCHPQSTDHIGWIKELTTCSYLMVIYTPRLCDDVAFLPPRQDEVHTI ECREILMPDEVTEWEAITEWYMTNQVADAAADADADADQASLPIVGGIEVGGRKLVGMEGKVIEKGRVVSASEER VEVVVVAKRENGEVRKTSKQVLKKYDIDPEKLEEMKNLLEERAEGKDWTLEVVESNGVIKFQGSFEDDEEDTLND KPSPEKLDENKVSESSSGQKPKQETESVEKKKQSSTKPENSEGSEETFKDEL* |
Coding | >Pro_DTO070G2_2|g9307.t1 ATGGGTCACTCAGCAAGCCTGGCGCCGTGGCTGGTATTGGCATGTGCTGTGTCTAGCACGTGGGCAAACAAAAAA CCGTTCAACATTAATGACGATATTCTGGCTTATCCCCAGTATCAAGTGACATTCCCCGAGGAGTATGTGCTTGAA TCCCACGCCGAAGCATTGCTCCGATCCGAGGCCAGCCCCGGCGCCAATGACCAGAACAATCCCCAGGTTTACATA GGAAAGGATAGAACGGACTCCACCGCCCAACCTGAGGATACGAATGTATCTCTGTTCACCTACGAAGAGATGATA CTAGAGAACCGGCGACTCCTCTGCCAGATCCCACGTGTCACGAACGACGACCATAATACAACGAGAGACAAGGAG GATAGCAAAGCCGAGGAGCAAAAGGAACTAGCTCGGGCGACAGATCGTGGCCTGGAACTCCTACGTGAAATGGAG GGGAAATGCATGTACTATTTCTCCGGCTGGTGGTCCTATTCCTTCTGTTATCAGAAGCAGATCAAGCAGTTCCAT GCGCTCCCCGCTGGCCGTGGTATCCCCAACTACCCACCAATCGAAGACACTCAGACGCATTCCTTCGTCTTGGGA AAGTTTATTGGCGACAAGGGCGAGGGAGAGAAACAATCCGCCCAGACAGATGTGGCAGAGCTTCACACGCAGGGC GGCTCACGGTACTTGGTCCAGCATCTGCGTGGCGGGACCAAGTGCGATCTTACGGGACGCGAGCGCAAAGTTGAA GTGCAGTTTCATTGCCACCCACAATCGACAGATCACATCGGCTGGATTAAGGAGCTCACCACGTGCTCTTACCTA ATGGTAATCTATACCCCTCGTCTATGTGATGACGTCGCTTTCCTGCCACCACGGCAGGATGAGGTACACACTATC GAGTGTCGTGAAATCCTGATGCCTGACGAAGTCACCGAATGGGAAGCAATCACAGAGTGGTACATGACCAACCAA GTAGCCGATGCTGCTGCGGATGCGGATGCGGATGCCGACCAAGCCAGCCTCCCGATTGTCGGAGGAATCGAAGTT GGCGGTCGTAAGCTTGTTGGCATGGAGGGCAAGGTAATTGAAAAGGGACGGGTGGTATCCGCAAGCGAGGAGCGA GTGGAGGTGGTGGTGGTTGCGAAACGCGAGAATGGCGAGGTCCGAAAAACGTCCAAGCAGGTACTGAAAAAGTAC GATATCGACCCGGAGAAACTGGAAGAGATGAAGAATCTACTGGAAGAAAGAGCAGAAGGCAAAGACTGGACGCTG GAAGTTGTTGAAAGCAACGGCGTGATCAAGTTCCAAGGCAGCTTTGAAGACGACGAGGAAGACACTTTGAACGAC AAGCCTTCTCCAGAGAAACTGGATGAAAACAAGGTATCTGAAAGTTCCTCTGGCCAAAAGCCAAAGCAGGAAACA GAGTCGGTCGAAAAGAAGAAGCAGTCCTCAACCAAGCCTGAAAACAGCGAGGGTAGCGAAGAGACCTTTAAAGAT GAACTATGA |
Transcript | >Pro_DTO070G2_2|g9307.t1 ATGGGTCACTCAGCAAGCCTGGCGCCGTGGCTGGTATTGGCATGTGCTGTGTCTAGCACGTGGGCAAACAAAAAA CCGTTCAACATTAATGACGATATTCTGGCTTATCCCCAGTATCAAGTGACATTCCCCGAGGAGTATGTGCTTGAA TCCCACGCCGAAGCATTGCTCCGATCCGAGGCCAGCCCCGGCGCCAATGACCAGAACAATCCCCAGGTTTACATA GGAAAGGATAGAACGGACTCCACCGCCCAACCTGAGGATACGAATGTATCTCTGTTCACCTACGAAGAGATGATA CTAGAGAACCGGCGACTCCTCTGCCAGATCCCACGTGTCACGAACGACGACCATAATACAACGAGAGACAAGGAG GATAGCAAAGCCGAGGAGCAAAAGGAACTAGCTCGGGCGACAGATCGTGGCCTGGAACTCCTACGTGAAATGGAG GGGAAATGCATGTACTATTTCTCCGGCTGGTGGTCCTATTCCTTCTGTTATCAGAAGCAGATCAAGCAGTTCCAT GCGCTCCCCGCTGGCCGTGGTATCCCCAACTACCCACCAATCGAAGACACTCAGACGCATTCCTTCGTCTTGGGA AAGTTTATTGGCGACAAGGGCGAGGGAGAGAAACAATCCGCCCAGACAGATGTGGCAGAGCTTCACACGCAGGGC GGCTCACGGTACTTGGTCCAGCATCTGCGTGGCGGGACCAAGTGCGATCTTACGGGACGCGAGCGCAAAGTTGAA GTGCAGTTTCATTGCCACCCACAATCGACAGATCACATCGGCTGGATTAAGGAGCTCACCACGTGCTCTTACCTA ATGGTAATCTATACCCCTCGTCTATGTGATGACGTCGCTTTCCTGCCACCACGGCAGGATGAGGTACACACTATC GAGTGTCGTGAAATCCTGATGCCTGACGAAGTCACCGAATGGGAAGCAATCACAGAGTGGTACATGACCAACCAA GTAGCCGATGCTGCTGCGGATGCGGATGCGGATGCCGACCAAGCCAGCCTCCCGATTGTCGGAGGAATCGAAGTT GGCGGTCGTAAGCTTGTTGGCATGGAGGGCAAGGTAATTGAAAAGGGACGGGTGGTATCCGCAAGCGAGGAGCGA GTGGAGGTGGTGGTGGTTGCGAAACGCGAGAATGGCGAGGTCCGAAAAACGTCCAAGCAGGTACTGAAAAAGTAC GATATCGACCCGGAGAAACTGGAAGAGATGAAGAATCTACTGGAAGAAAGAGCAGAAGGCAAAGACTGGACGCTG GAAGTTGTTGAAAGCAACGGCGTGATCAAGTTCCAAGGCAGCTTTGAAGACGACGAGGAAGACACTTTGAACGAC AAGCCTTCTCCAGAGAAACTGGATGAAAACAAGGTATCTGAAAGTTCCTCTGGCCAAAAGCCAAAGCAGGAAACA GAGTCGGTCGAAAAGAAGAAGCAGTCCTCAACCAAGCCTGAAAACAGCGAGGGTAGCGAAGAGACCTTTAAAGAT GAACTATGA |
Gene | >Pro_DTO070G2_2|g9307.t1 ATGGGTCACTCAGCAAGCCTGGCGCCGTGGCTGGTATTGGCATGTGCTGTGTCTAGCACGTGGGCAAACAAAAAA CCGTTCAACATTAATGACGATATTCTGGCTTATCCCCAGGTAGGTTGGATGGATCTGTCTTGCACCCATTTAAAG CAAACCTAACGTTGGATATTGCCCATAGTATCAAGTGACATTCCCCGAGGAGTATGTGCTTGAATCCCACGCCGA AGCATTGCTCCGATCCGAGGCCAGCCCCGGCGCCAATGACCAGAACAATCCCCAGGTTTACATAGGAAAGGATAG AACGGACTCCACCGCCCAACCTGAGGATACGAATGTATCTCTGTTCACCTACGAAGAGATGATACTAGAGAACCG GCGACTCCTCTGCCAGATCCCACGTGTCACGAACGACGACCATAATACAACGAGAGACAAGGAGGATAGCAAAGC CGAGGAGCAAAAGGAACTAGCTCGGGCGACAGATCGTGGCCTGGAACTCCTACGTGAAATGGAGGGGAAATGCAT GTACTATTTCTCCGGCTGGTGGTCCTATTCCTTCTGTTATCAGAAGCAGATCAAGCAGTTCCATGCGCTCCCCGC TGGCCGTGGTATCCCCAACTACCCACCAATCGAAGACACTCAGACGCATTCCTTCGTCTTGGGAAAGTTTATTGG CGACAAGGGCGAGGGAGAGAAACAATCCGCCCAGACAGATGTGGCAGAGCTTCACACGCAGGGCGGCTCACGGTA CTTGGTCCAGCATCTGCGTGGCGGGACCAAGTGCGATCTTACGGGACGCGAGCGCAAAGTTGAAGTGCAGTTTCA TTGCCACCCACAATCGACAGATCACATCGGCTGGATTAAGGAGCTCACCACGTGCTCTTACCTAATGGTAATCTA TACCCCTCGTCTATGTGATGACGTCGCTTTCCTGCCACCACGGCAGGATGAGGTACACACTATCGAGTGTCGTGA AATCCTGATGCCTGACGAAGTCACCGAATGGGAAGCAATCACAGAGTGGTACATGACCAACCAAGTAGCCGATGC TGCTGCGGATGCGGATGCGGATGCCGACCAAGCCAGCCTCCCGATTGTCGGAGGAATCGAAGTTGGCGGTCGTAA GCTTGTTGGCATGGAGGGCAAGGTAATTGAAAAGGGACGGGTGGTATCCGCAAGCGAGGAGCGAGTGGAGGTGGT GGTGGTTGCGAAACGCGAGAATGGCGAGGTCCGAAAAACGTCCAAGCAGGTACTGAAAAAGTACGATATCGACCC GGAGAAACTGGAAGAGATGAAGAATCTACTGGAAGAAAGAGCAGAAGGCAAAGACTGGACGCTGGAAGTTGTTGA AAGCAACGGCGTGATCAAGTTCCAAGGCAGCTTTGAAGACGACGAGGAAGACACTTTGAACGACAAGCCTTCTCC AGAGAAACTGGATGAAAACAAGGTATCTGAAAGTTCCTCTGGCCAAAAGCCAAAGCAGGAAACAGAGTCGGTCGA AAAGAAGAAGCAGTCCTCAACCAAGCCTGAAAACAGCGAGGGTAGCGAAGAGACCTTTAAAGATGAACTATGA |