© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Pro_DTO070G2_2|g9205.t1 |
| Gene name | |
| Location | scaffold_25:63625..66697 |
| Strand | + |
| Gene length (bp) | 3072 |
| Transcript length (bp) | 2031 |
| Coding sequence length (bp) | 2031 |
| Protein length (aa) | 677 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00324 | AA_permease | Amino acid permease | 8.5E-114 | 181 | 635 |
| PF13520 | AA_permease_2 | Amino acid permease | 3.6E-27 | 184 | 622 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0016020 | membrane | Yes |
| GO:0006810 | transport | No |
| GO:0005215 | transporter activity | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0005575 | cellular_component | No |
| GO:0051179 | localization | No |
| GO:0009987 | cellular process | No |
| GO:0003674 | molecular_function | No |
| GO:0051234 | establishment of localization | No |
| GO:0008150 | biological_process | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 20 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 184 | 206 | 22 |
| 2 | 216 | 238 | 22 |
| 3 | 261 | 283 | 22 |
| 4 | 293 | 315 | 22 |
| 5 | 322 | 344 | 22 |
| 6 | 374 | 396 | 22 |
| 7 | 416 | 435 | 19 |
| 8 | 469 | 491 | 22 |
| 9 | 512 | 534 | 22 |
| 10 | 544 | 566 | 22 |
| 11 | 586 | 608 | 22 |
| 12 | 612 | 634 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Pro_DTO070G2_2|g9205.t1 MTMNNIFSSIATSTNHLKAKYHGHIQANRFKLLIQELQEAEQTKDQLDWISEHRQETRRANNIIQREMYVGATYR RYEAQVQVETPPEPSTLKKLQGCNVELMLLNIEYFQHLERMAELLERKPSGCLVHRHTKNLRHKSKQLWNIEQIY CQLRGGCCALEADLLDDRYVTTTKRGLKNRHVQLMALGGTIGTGLFVGSGQALAIGGPASLLLGYLFISAMVYGL VTAIAEVGAYLPVHGGTMSYHGFRYVSRSMGFAMGYLYWYSLGILVPYEITAAGLVIGYWDQNGSINIAVWITVM MVVIVALNFMPVRVYGESEFWFAGVKIITLIGLLMVSFILFWGGGPSRQRLGFHYWNNPRPFNAYLATGDSGRFV ALLKCTVSSAIAFIFAPELIVISGGEMESPRRNIPRAARRYIYRLIFFYIFGVLAIGVICPSDASRLTKSDGTVS SSPFVIGIQNAGIPVLDHIVNAAVLTSAWSAGNSFLYMSSRSLYSLAMSGNAPHVFKTCNRWGVPYWAVSVSACF SALAYLAVGNSSSIVFNWFVNFTNTSGFISWICCSVVFLRFRKAVKAQGIEQPYKSKMQPYGVYFGLAGATLMAL INGFTVFFPSEWSVSNFFTAYIGIPAFLILYFGHRALYWSDPWAWHPEEVDMHTGLDEIIAAEQPPKPRGPWWKF W* |
| Coding | >Pro_DTO070G2_2|g9205.t1 ATGACAATGAATAATATATTTTCCTCTATTGCCACTTCCACCAACCATCTCAAGGCCAAATATCATGGTCATATC CAAGCTAACAGATTCAAACTGCTGATACAAGAGCTCCAAGAAGCAGAACAGACCAAGGATCAACTCGACTGGATA TCTGAACATCGCCAGGAGACAAGACGGGCTAACAATATCATCCAACGGGAAATGTATGTGGGTGCGACATATCGC CGCTATGAAGCCCAAGTGCAGGTTGAAACCCCGCCAGAACCTTCCACCTTGAAAAAGCTTCAGGGGTGCAATGTC GAGCTCATGCTACTGAATATTGAATACTTCCAACACCTAGAGCGAATGGCAGAACTCCTTGAGCGCAAGCCATCG GGATGCCTCGTCCATCGACATACAAAAAATCTGCGGCACAAATCCAAACAGCTCTGGAATATCGAACAGATCTAC TGCCAACTTCGTGGCGGCTGCTGCGCTCTCGAAGCCGACCTGCTCGATGATCGTTATGTAACTACAACCAAACGT GGGTTGAAGAATCGCCATGTTCAGTTAATGGCCCTCGGCGGCACGATCGGAACAGGACTTTTCGTGGGTTCCGGC CAAGCCCTGGCCATTGGAGGCCCCGCATCGCTTCTGTTGGGTTATCTCTTCATCTCAGCCATGGTTTATGGCTTG GTCACGGCTATTGCTGAGGTAGGTGCCTATCTTCCGGTACATGGTGGAACAATGAGTTATCATGGATTCCGCTAT GTGTCGCGGAGTATGGGTTTCGCTATGGGATATCTATACTGGTACTCTCTCGGAATCTTGGTGCCGTACGAGATC ACAGCTGCCGGACTGGTTATTGGATACTGGGACCAGAATGGATCAATCAATATCGCGGTGTGGATCACAGTCATG ATGGTCGTTATTGTCGCGCTCAACTTTATGCCTGTGCGAGTATACGGCGAGTCGGAGTTCTGGTTCGCCGGGGTG AAAATCATCACTCTGATCGGTTTGTTGATGGTATCTTTCATCCTCTTCTGGGGTGGTGGACCCAGTCGTCAGCGA CTAGGCTTTCATTATTGGAATAACCCGCGTCCATTCAACGCCTATCTCGCAACGGGAGATTCGGGCCGGTTCGTG GCGTTGTTGAAATGCACAGTATCCAGCGCCATTGCGTTCATTTTCGCCCCAGAGCTGATTGTGATCAGTGGGGGT GAGATGGAGTCCCCTCGACGCAATATACCCCGGGCAGCCAGGAGATACATTTACCGATTGATCTTCTTTTACATC TTTGGTGTACTAGCCATTGGTGTTATATGCCCATCCGATGCTAGTCGTTTGACCAAGAGCGACGGCACGGTAAGC TCATCACCATTCGTGATCGGCATCCAGAACGCCGGCATCCCCGTTTTAGACCACATCGTGAACGCTGCCGTCTTG ACATCCGCCTGGTCCGCAGGAAATTCCTTCCTGTATATGTCTTCGCGGTCACTCTATTCCTTGGCTATGTCAGGC AACGCGCCACATGTGTTCAAGACATGTAACCGATGGGGTGTCCCGTACTGGGCTGTTTCGGTTTCGGCATGCTTC TCAGCATTGGCTTATCTTGCCGTTGGCAACTCCAGTTCGATTGTGTTCAACTGGTTCGTCAACTTCACCAACACT TCTGGTTTCATCTCATGGATCTGCTGTTCCGTGGTATTTCTCCGTTTCCGCAAAGCTGTCAAAGCACAGGGCATT GAACAGCCGTACAAATCAAAGATGCAGCCGTATGGGGTTTATTTTGGCCTCGCGGGTGCCACTCTGATGGCGCTC ATAAATGGGTTCACAGTGTTCTTCCCATCGGAATGGTCTGTGAGCAACTTTTTCACCGCATACATTGGTATTCCT GCTTTCCTGATTCTTTACTTTGGACACCGGGCACTGTATTGGAGTGATCCATGGGCATGGCACCCAGAAGAAGTC GACATGCACACGGGCTTGGATGAAATTATTGCTGCTGAGCAGCCACCAAAACCACGGGGGCCTTGGTGGAAGTTT TGGTAA |
| Transcript | >Pro_DTO070G2_2|g9205.t1 ATGACAATGAATAATATATTTTCCTCTATTGCCACTTCCACCAACCATCTCAAGGCCAAATATCATGGTCATATC CAAGCTAACAGATTCAAACTGCTGATACAAGAGCTCCAAGAAGCAGAACAGACCAAGGATCAACTCGACTGGATA TCTGAACATCGCCAGGAGACAAGACGGGCTAACAATATCATCCAACGGGAAATGTATGTGGGTGCGACATATCGC CGCTATGAAGCCCAAGTGCAGGTTGAAACCCCGCCAGAACCTTCCACCTTGAAAAAGCTTCAGGGGTGCAATGTC GAGCTCATGCTACTGAATATTGAATACTTCCAACACCTAGAGCGAATGGCAGAACTCCTTGAGCGCAAGCCATCG GGATGCCTCGTCCATCGACATACAAAAAATCTGCGGCACAAATCCAAACAGCTCTGGAATATCGAACAGATCTAC TGCCAACTTCGTGGCGGCTGCTGCGCTCTCGAAGCCGACCTGCTCGATGATCGTTATGTAACTACAACCAAACGT GGGTTGAAGAATCGCCATGTTCAGTTAATGGCCCTCGGCGGCACGATCGGAACAGGACTTTTCGTGGGTTCCGGC CAAGCCCTGGCCATTGGAGGCCCCGCATCGCTTCTGTTGGGTTATCTCTTCATCTCAGCCATGGTTTATGGCTTG GTCACGGCTATTGCTGAGGTAGGTGCCTATCTTCCGGTACATGGTGGAACAATGAGTTATCATGGATTCCGCTAT GTGTCGCGGAGTATGGGTTTCGCTATGGGATATCTATACTGGTACTCTCTCGGAATCTTGGTGCCGTACGAGATC ACAGCTGCCGGACTGGTTATTGGATACTGGGACCAGAATGGATCAATCAATATCGCGGTGTGGATCACAGTCATG ATGGTCGTTATTGTCGCGCTCAACTTTATGCCTGTGCGAGTATACGGCGAGTCGGAGTTCTGGTTCGCCGGGGTG AAAATCATCACTCTGATCGGTTTGTTGATGGTATCTTTCATCCTCTTCTGGGGTGGTGGACCCAGTCGTCAGCGA CTAGGCTTTCATTATTGGAATAACCCGCGTCCATTCAACGCCTATCTCGCAACGGGAGATTCGGGCCGGTTCGTG GCGTTGTTGAAATGCACAGTATCCAGCGCCATTGCGTTCATTTTCGCCCCAGAGCTGATTGTGATCAGTGGGGGT GAGATGGAGTCCCCTCGACGCAATATACCCCGGGCAGCCAGGAGATACATTTACCGATTGATCTTCTTTTACATC TTTGGTGTACTAGCCATTGGTGTTATATGCCCATCCGATGCTAGTCGTTTGACCAAGAGCGACGGCACGGTAAGC TCATCACCATTCGTGATCGGCATCCAGAACGCCGGCATCCCCGTTTTAGACCACATCGTGAACGCTGCCGTCTTG ACATCCGCCTGGTCCGCAGGAAATTCCTTCCTGTATATGTCTTCGCGGTCACTCTATTCCTTGGCTATGTCAGGC AACGCGCCACATGTGTTCAAGACATGTAACCGATGGGGTGTCCCGTACTGGGCTGTTTCGGTTTCGGCATGCTTC TCAGCATTGGCTTATCTTGCCGTTGGCAACTCCAGTTCGATTGTGTTCAACTGGTTCGTCAACTTCACCAACACT TCTGGTTTCATCTCATGGATCTGCTGTTCCGTGGTATTTCTCCGTTTCCGCAAAGCTGTCAAAGCACAGGGCATT GAACAGCCGTACAAATCAAAGATGCAGCCGTATGGGGTTTATTTTGGCCTCGCGGGTGCCACTCTGATGGCGCTC ATAAATGGGTTCACAGTGTTCTTCCCATCGGAATGGTCTGTGAGCAACTTTTTCACCGCATACATTGGTATTCCT GCTTTCCTGATTCTTTACTTTGGACACCGGGCACTGTATTGGAGTGATCCATGGGCATGGCACCCAGAAGAAGTC GACATGCACACGGGCTTGGATGAAATTATTGCTGCTGAGCAGCCACCAAAACCACGGGGGCCTTGGTGGAAGTTT TGGTAA |
| Gene | >Pro_DTO070G2_2|g9205.t1 ATGACAATGAATAATATATTTTCCTCTATTGCCACTTCCACCAACCATCTCAAGGCCAAATATCATGGTCATATC CAAGCTAACAGATTCAAACTGCTGATACAAGAGCTCCAAGAAGCAGAACAGACCAAGGATCAACTCGACTGGATA TCTGAACATCGCCAGGAGACAAGACGGGCTAACAATATCATCCAACGGGAAATGTATGTGGGTGCGACATATCGC CGCTATGAAGCCCAAGTGCAGGTTGAAACCCCGCCAGAACCTTCCACCTTGAAAAAGCTTCAGGGGTGCAATGTC GAGCTCATGCTACTGAATATTGAATACTTCCAACACCTAGAGCGAATGGCAGAACTCCTTGAGCGCAAGCCATCG GGATGCCTCGTCCATCGACATACAAAAAATCTGCGGCACAAATCCAAACAGCTCTGGAATATCGAACAGATCTAC TGCCAACTTCGTGGCGGCTGCTGCGCTCGTGAGTGTGGTTGCTGTGGACGATCTTGGCACACCATTCGAGAGCCT TCTGGTAAGGTTCGATATATGCACTGTACGGGAAGTTGTGGATGTTGTACCCGCCATCGTGGTTACTCTTCTTCA AGTGTGGTCAGGAAGAAGTCCGGCATGTAAGCTTAACGGTCGACAAGCCCCAAGGGACTTCGATTTGTGAAGGGG GATTGCTCTCGCATAATGCTTGCATAATTTCTGCGATATCTTCCAACATAAACCTTGAAAGGTGCCCTGGCCTTT GATTCGTCAATCTTAACTTTATCTCCTATTTAACTTTGCTCGTCCTTTTCTGATACGAGATTATTTAATTACTCT TTATCTGGTCTCTTGCCCGGTCTCTTGGCCCAGCTTTTTTTTCTTTTCTTGTCGGTTATTCGCGGCCAATAGTAT CGTGGACTGGTCACCGGACCGCTGGTGTTGTTACTTAGGGCGCCATTTTTTGCCCGTGTTCTATTAGGGAGTTCG AGAGATCATTTTTCCATTCTGCCGTTCACGGATCCCAGCTTTTGCTGTCCTCTAATAATCTCAACCATCGAGGTC TTTCCGGTTGATTATGCAAGTATGGGCACTAACCGTGGAAAAGAAAACTCGGGGTATAAGCTGCAATAATGAATA TGTTGTACGCATTTCGTATGATTTTGCAGTCTTATCTCCGGCTGGAAGTCTAGTGGCTTACCCCAGGATTGTACC TTTGTTCAGGCCTAACGGCCATTAGGCGGCCACGGACCCCTCTACTGACCAGTCATTGTCCAGAGATATAGCGAT TTAATACGGCGCGGCTGGGGGTCTCTGTACGACGGGATGGAAATGCGCTGTGGAAAAGACTCTTAAATACGGCAT AGATTCCTGTCGAGCATTTTTTATCCAGCATTTTCCGCTTTCATTGCTGCACAAGATGGCAACAATAGAAGGTGA TCAACATCCGATCAGCGAGAAGGGCAAATCACTTCGAACTTTAGTCGAAGCCGACCTGCTCGATGATCGTTATGT AACTACAACCAAACGTGGGTTGAAGAATCGCCATGTTCAGTTAATGGCCCTCGGCGGCACGATCGGAACAGGTAA GTCTGCAGTGCGACATGAAAAAAAAAGGATTACTCACATAAGTCAGGACTTTTCGTGGGTTCCGGCCAAGCCCTG GCCATTGGAGGCCCCGCATCGCTTCTGTTGGGTTATCTCTTCATCTCAGCCATGGTTTATGGCTTGGTCACGGCT ATTGCTGAGGTAGGTGCCTATCTTCCGGTACATGGTGGAACAATGAGTTATCATGGATTCCGCTATGTGTCGCGG AGTATGGGTTTCGCTATGGGATATCTATACTGGTACTCTCTCGGAATCTTGGTGCCGTACGAGATCACAGCTGCC GGACTGGTTATTGGATACTGGGACCAGAATGGATCAATCAATATCGCGGTGTGGATCACAGTCATGATGGTCGTT ATTGTCGCGCTCAACTTTATGCCTGTGCGAGTATACGGCGAGTCGGAGTTCTGGTTCGCCGGGGTGAAAATCATC ACTCTGATCGGTTTGTTGATGGTATCTTTCATCCTCTTCTGGGGTGGTGGACCCAGTCGTCAGCGACTAGGCTTT CATTATTGGAATAACCCGCGTCCATTCAACGCCTATCTCGCAACGGGAGATTCGGGCCGGTTCGTGGCGTTGTTG AAATGCACAGTATCCAGCGCCATTGCGTTCATTTTCGCCCCAGAGCTGATTGTGATCAGTGGGGGTGAGATGGAG TCCCCTCGACGCAATATACCCCGGGCAGCCAGGAGATACATTTACCGATTGATCTTCTTTTACATCTTTGGTGTA CTAGCCATTGGTGTTATATGCCCATCCGATGCTAGTCGTTTGACCAAGAGCGACGGCACGGTAAGCTCATCACCA TTCGTGATCGGCATCCAGAACGCCGGCATCCCCGTTTTAGACCACATCGTGAACGCTGCCGTCTTGACATCCGCC TGGTCCGCAGGAAATTCCTTCCTGTATATGTCTTCGCGGTCACTCTATTCCTTGGCTATGTCAGGCAACGCGCCA CATGTGTTCAAGACATGTAACCGATGGGGTGTCCCGTACTGGGCTGTTTCGGTTTCGGCATGCTTCTCAGCATTG GCTTATCTTGCCGTTGGCAACTCCAGTTCGATTGTGTTCAACTGGTTCGTCAACTTCACCAACACTTCTGGTTTC ATCTCATGGATCTGCTGTTCCGTGGTATTTCTCCGTTTCCGCAAAGCTGTCAAAGCACAGGGCATTGAACAGCCG TACAAATCAAAGATGCAGCCGTATGGGGTTTATTTTGGCCTCGCGGGTGCCACTCTGATGGCGCTCATAAATGGG TTCACAGTGTTCTTCCCATCGGAATGGTCTGTGAGCAACTTTTTCACCGCATACATTGGTATTCCTGCTTTCCTG ATTCTTTACTTTGGACACCGGGCACTGTATTGGAGTGATCCATGGGCATGGCACCCAGAAGAAGTCGACATGCAC ACGGGCTTGGATGAAATTATTGCTGCTGAGCAGCCACCAAAACCACGGGGGCCTTGGTGGAAGTTTTGGTAA |