© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Pro_DTO070G2_2|g9204.t1 |
| Gene name | |
| Location | scaffold_25:59484..61296 |
| Strand | - |
| Gene length (bp) | 1812 |
| Transcript length (bp) | 1617 |
| Coding sequence length (bp) | 1617 |
| Protein length (aa) | 539 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF13520 | AA_permease_2 | Amino acid permease | 1.1E-48 | 43 | 492 |
| PF00324 | AA_permease | Amino acid permease | 2.7E-24 | 48 | 508 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0016020 | membrane | Yes |
| GO:0006810 | transport | No |
| GO:0005215 | transporter activity | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0005575 | cellular_component | No |
| GO:0051179 | localization | No |
| GO:0009987 | cellular process | No |
| GO:0003674 | molecular_function | No |
| GO:0051234 | establishment of localization | No |
| GO:0008150 | biological_process | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 68 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 43 | 65 | 22 |
| 2 | 75 | 94 | 19 |
| 3 | 128 | 150 | 22 |
| 4 | 170 | 192 | 22 |
| 5 | 199 | 221 | 22 |
| 6 | 245 | 267 | 22 |
| 7 | 288 | 310 | 22 |
| 8 | 330 | 352 | 22 |
| 9 | 385 | 407 | 22 |
| 10 | 412 | 434 | 22 |
| 11 | 447 | 469 | 22 |
| 12 | 484 | 503 | 19 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Pro_DTO070G2_2|g9204.t1 MAADGFSHPSGVTVEQGVSTTNADRTLEDMGYKPEMARNRSIWQVTFMCFILSSVPYGLSTTLYYPLAAGGPANV IWGWVIISFLILCVAISLAEITSVYPTAGGVYYQTFVLSPLWCRRVASWICGWSYVAGNITITLAVNFGTALLLV ACLDVFEKSPGVGITDDFQAWHIFLIFLAITFLTHSISAFGNKWLPWLETFAIFWTMAGLLAIVVCLLAVAKQGR HNAAWVFGHFESQAGWPAGWSFFIGLLQAAYATSATGMIISLCEEVHEPAIMVPKAMVGTIIINFIAGLLFLIPV CFVLPDLTYLVNLASGQPTPAIFKAAIGNSAGTFCLLIPLLVLGIICGVGCVTATSRCTWAFARDGGIPGSKWWS TVNKTLDIPFNSLLLGMVVEILLGVIYFGSTAAYNAFSGVGVIFLTMSYACPIAVSLIFRGREDIKNGSFNFGVF GLIANVIALGWSLLAIPLFCMPTLTTVTKESMNYASVVFAGFIAIAALWYGVWGYNNYRGPPTDAVEQDDTSPEP SAYSEVTKKESSH* |
| Coding | >Pro_DTO070G2_2|g9204.t1 ATGGCTGCCGATGGATTCAGTCATCCCTCCGGGGTGACCGTCGAACAGGGTGTGAGCACCACCAATGCGGATCGC ACCCTGGAGGATATGGGATACAAGCCTGAGATGGCTCGCAATCGATCGATTTGGCAAGTCACCTTTATGTGCTTC ATTCTCTCTTCAGTGCCCTATGGCTTGTCGACCACTCTATACTACCCACTCGCCGCAGGTGGGCCGGCCAATGTC ATCTGGGGTTGGGTGATCATCTCTTTCTTGATTCTCTGCGTGGCTATCTCATTGGCGGAAATCACTTCGGTCTAC CCGACTGCAGGTGGTGTCTACTATCAAACCTTTGTCTTGTCGCCCTTGTGGTGTCGTCGCGTTGCGTCGTGGATC TGTGGCTGGTCCTACGTTGCAGGAAACATCACCATTACCCTCGCTGTCAATTTTGGAACTGCCCTGCTCCTCGTG GCCTGTCTGGATGTCTTTGAAAAATCACCGGGCGTCGGAATCACCGATGATTTCCAGGCCTGGCATATCTTCCTG ATCTTCTTGGCCATTACCTTCCTGACACACTCCATCTCGGCGTTTGGCAACAAATGGTTGCCGTGGTTGGAGACA TTCGCTATTTTCTGGACTATGGCCGGTCTACTCGCCATTGTCGTCTGCCTGTTGGCTGTCGCCAAGCAAGGGCGT CACAATGCCGCATGGGTTTTTGGTCACTTTGAAAGTCAAGCTGGGTGGCCCGCGGGATGGTCGTTCTTCATTGGT CTCTTGCAGGCTGCCTACGCCACATCGGCGACCGGCATGATTATCTCTCTCTGCGAGGAGGTCCATGAGCCCGCC ATCATGGTCCCAAAGGCCATGGTCGGAACCATCATTATCAACTTTATCGCCGGTCTCCTCTTCTTGATCCCCGTC TGCTTCGTGCTTCCCGATCTCACATACCTGGTCAATCTGGCTTCGGGCCAGCCCACCCCCGCCATCTTCAAGGCC GCCATTGGCAACTCAGCTGGTACATTCTGTTTGTTAATTCCTCTGCTTGTGCTGGGCATCATTTGTGGTGTCGGT TGTGTTACCGCTACCTCTCGCTGTACTTGGGCCTTTGCCCGCGACGGCGGCATTCCCGGATCAAAATGGTGGAGC ACTGTCAACAAGACCCTTGACATTCCTTTCAATTCTTTATTATTGGGAATGGTCGTTGAAATTCTTCTCGGTGTG ATCTACTTTGGCTCCACTGCTGCGTACAATGCCTTTTCGGGTGTTGGTGTCATTTTCTTGACCATGAGCTATGCC TGCCCGATCGCCGTCTCCCTGATCTTCCGTGGTCGAGAGGATATTAAGAACGGTAGCTTCAACTTTGGAGTCTTT GGCCTGATCGCTAACGTTATTGCTCTTGGCTGGAGTCTTCTTGCAATTCCTCTTTTCTGCATGCCAACGCTTACA ACTGTCACCAAGGAGAGCATGAACTATGCATCTGTGGTGTTCGCTGGCTTCATTGCTATCGCTGCCCTCTGGTAT GGTGTCTGGGGCTATAACAACTACCGCGGGCCCCCTACCGACGCTGTGGAGCAGGATGATACCTCCCCTGAACCT TCAGCCTACTCTGAAGTCACCAAGAAGGAATCCAGTCATTGA |
| Transcript | >Pro_DTO070G2_2|g9204.t1 ATGGCTGCCGATGGATTCAGTCATCCCTCCGGGGTGACCGTCGAACAGGGTGTGAGCACCACCAATGCGGATCGC ACCCTGGAGGATATGGGATACAAGCCTGAGATGGCTCGCAATCGATCGATTTGGCAAGTCACCTTTATGTGCTTC ATTCTCTCTTCAGTGCCCTATGGCTTGTCGACCACTCTATACTACCCACTCGCCGCAGGTGGGCCGGCCAATGTC ATCTGGGGTTGGGTGATCATCTCTTTCTTGATTCTCTGCGTGGCTATCTCATTGGCGGAAATCACTTCGGTCTAC CCGACTGCAGGTGGTGTCTACTATCAAACCTTTGTCTTGTCGCCCTTGTGGTGTCGTCGCGTTGCGTCGTGGATC TGTGGCTGGTCCTACGTTGCAGGAAACATCACCATTACCCTCGCTGTCAATTTTGGAACTGCCCTGCTCCTCGTG GCCTGTCTGGATGTCTTTGAAAAATCACCGGGCGTCGGAATCACCGATGATTTCCAGGCCTGGCATATCTTCCTG ATCTTCTTGGCCATTACCTTCCTGACACACTCCATCTCGGCGTTTGGCAACAAATGGTTGCCGTGGTTGGAGACA TTCGCTATTTTCTGGACTATGGCCGGTCTACTCGCCATTGTCGTCTGCCTGTTGGCTGTCGCCAAGCAAGGGCGT CACAATGCCGCATGGGTTTTTGGTCACTTTGAAAGTCAAGCTGGGTGGCCCGCGGGATGGTCGTTCTTCATTGGT CTCTTGCAGGCTGCCTACGCCACATCGGCGACCGGCATGATTATCTCTCTCTGCGAGGAGGTCCATGAGCCCGCC ATCATGGTCCCAAAGGCCATGGTCGGAACCATCATTATCAACTTTATCGCCGGTCTCCTCTTCTTGATCCCCGTC TGCTTCGTGCTTCCCGATCTCACATACCTGGTCAATCTGGCTTCGGGCCAGCCCACCCCCGCCATCTTCAAGGCC GCCATTGGCAACTCAGCTGGTACATTCTGTTTGTTAATTCCTCTGCTTGTGCTGGGCATCATTTGTGGTGTCGGT TGTGTTACCGCTACCTCTCGCTGTACTTGGGCCTTTGCCCGCGACGGCGGCATTCCCGGATCAAAATGGTGGAGC ACTGTCAACAAGACCCTTGACATTCCTTTCAATTCTTTATTATTGGGAATGGTCGTTGAAATTCTTCTCGGTGTG ATCTACTTTGGCTCCACTGCTGCGTACAATGCCTTTTCGGGTGTTGGTGTCATTTTCTTGACCATGAGCTATGCC TGCCCGATCGCCGTCTCCCTGATCTTCCGTGGTCGAGAGGATATTAAGAACGGTAGCTTCAACTTTGGAGTCTTT GGCCTGATCGCTAACGTTATTGCTCTTGGCTGGAGTCTTCTTGCAATTCCTCTTTTCTGCATGCCAACGCTTACA ACTGTCACCAAGGAGAGCATGAACTATGCATCTGTGGTGTTCGCTGGCTTCATTGCTATCGCTGCCCTCTGGTAT GGTGTCTGGGGCTATAACAACTACCGCGGGCCCCCTACCGACGCTGTGGAGCAGGATGATACCTCCCCTGAACCT TCAGCCTACTCTGAAGTCACCAAGAAGGAATCCAGTCATTGA |
| Gene | >Pro_DTO070G2_2|g9204.t1 ATGGCTGCCGATGGATTCAGTCATCCCTCCGGGGTGACCGTCGAACAGGGTGTGAGCACCACCAATGCGGATCGC ACCCTGGAGGATATGGGATACAAGCCTGAGATGGCTCGCAATCGATCGATTTGGCAAGTCACCTTTATGTGCTTC ATTCTCTCTTCAGTGCCCTATGGCTTGTCGACCACTCTATACTACCCACTCGCCGCAGGTGGGCCGGCCAATGTC ATCTGGGGTTGGGTGATCATCTCTTTCTTGATTCTCTGCGTGGCTATCTCATTGGCGGAAATCACTTCGGTCTAC CCGACTGCAGGTGGTGTCTACTATCAAACCTTTGTCTTGTCGCCCTTGTGGTGTCGTCGCGTTGCGTCGTGGATC TGTGGCTGGTCCTACGTTGCAGGAAACATCACCATTACCCTCGCTGTCAATTTTGGAACTGCCCTGCTCCTCGTG GCCTGTCTGGATGTCTTTGAAAAATCACCGGGCGTCGGAATCACCGATGATTTCCAGGCCTGGCATATCTTCCTG ATCTTCTTGGCCATTACCTTCCTGACACACTCCATCTCGGCGTTTGGCAACAAATGGTTGCCGTGGTTGGAGGTA TGTGTCGCACGTGCCCCTTTGCCCCGTGGGGTAATCATACTGATGATCATCATTTTTAGACATTCGCTATTTTCT GGACTATGGCCGGTCTACTCGCCATTGTCGTCTGCCTGTTGGCTGTCGCCAAGCAAGGGCGTCACAATGCCGCAT GGGTTTTTGGTCACTTTGAAAGTCAAGCTGGGTGGCCCGCGGGATGGTCGTTCTTCATTGGTCTCTTGCAGGCTG CCTACGCCACATCGGCGACCGGCATGATTATCTCGTGAGTCTTGGCACCTTTGAATTCTCCAAGTCGGCTGTTCC ACATGCTGATATATGGTCTCTGTTAGTCTCTGCGAGGAGGTCCATGAGCCCGCCATCATGGTCCCAAAGGCCATG GTCGGAACCATCATTATCAACTTTATCGCCGGTCTCCTCTTCTTGATCCCCGTCTGCTTCGTGCTTCCCGATCTC ACATACCTGGTCAATCTGGCTTCGGGCCAGCCCACCCCCGCCATCTTCAAGGCCGCCATTGGCAACTCAGCTGGT ACATTCTGTTTGTTAATTCCTCTGCTTGTGCTGGGCATCATTTGTGGTGTCGGTTGTGTTACCGCTACCTCTCGC TGTACTTGGGCCTTTGCCCGCGACGGCGGCATTCCCGGATCAAAATGGTGGAGCACTGTCAACAAGACCCTTGAC ATTCCTTTCAATTCTTTATTATTGGGAATGGTCGTTGAAATTCTTCTCGGTGTGATCTACTTTGGCTCCACTGCT GCGTACAATGCCTTTTCGGGTGTTGGTGTCATTTTCTTGACCATGAGCTATGCCTGCCCGATCGCCGTCTCCCTG ATCTTCCGTGGTCGAGAGGATATTAAGAACGGTAGCTTCAACTTTGGAGTCTTTGGCCTGATCGCTAACGTTATT GCTCTTGGTGAGTTGCTTTAACAAAACCATCTGTTTATATATGGATTTCAACTAACCGCTTCAACTATCATAGGC TGGAGTCTTCTTGCAATTCCTCTTTTCTGCATGCCAACGCTTACAACTGTCACCAAGGAGAGCATGAACTATGCA TCTGTGGTGTTCGCTGGCTTCATTGCTATCGCTGCCCTCTGGTATGGTGTCTGGGGCTATAACAACTACCGCGGG CCCCCTACCGACGCTGTGGAGCAGGATGATACCTCCCCTGAACCTTCAGCCTACTCTGAAGTCACCAAGAAGGAA TCCAGTCATTGA |