© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Pro_DTO070G2_2|g9200.t1 |
| Gene name | |
| Location | scaffold_25:52286..53739 |
| Strand | + |
| Gene length (bp) | 1453 |
| Transcript length (bp) | 1167 |
| Coding sequence length (bp) | 1167 |
| Protein length (aa) | 389 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF07690 | MFS_1 | Major Facilitator Superfamily | 3.8E-29 | 2 | 330 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0006810 | transport | No |
| GO:0005215 | transporter activity | No |
| GO:0051179 | localization | No |
| GO:0009987 | cellular process | No |
| GO:0003674 | molecular_function | No |
| GO:0051234 | establishment of localization | No |
| GO:0008150 | biological_process | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 17 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 24 | 43 | 19 |
| 2 | 48 | 70 | 22 |
| 3 | 83 | 105 | 22 |
| 4 | 115 | 137 | 22 |
| 5 | 191 | 213 | 22 |
| 6 | 223 | 245 | 22 |
| 7 | 252 | 274 | 22 |
| 8 | 284 | 303 | 19 |
| 9 | 316 | 335 | 19 |
| 10 | 350 | 372 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Pro_DTO070G2_2|g9200.t1 MFLGVIILEIPSNIILHKIGPRQWISGQVCIFGIIACLQIFVRNKLGFLLTRTFLGLAEAGYIPGAMYTLSTWYT KEELTKRIAIFFFGMFGGTAISPLLGAAFLKLDGKGGLFGWQWIFLVEGLFSVAVSFVLFFFLPEHKKVPVSTDE VNISESGGLRLTEKPLAHPGKTHISLSLVWKTLTSFQKWPHFIATGCVFATWSPLTTYTPSIFMELGFPRVRANA LCAIGSLLTLPVILVFAWISDKSNKRGLTVIVAIFVYLIALVILRIAVHHVDKWGKFGLWTTVNALAVGYHPIHN SWIQINCKSSEERNISVAMFVMSATAGLMAGTQIFRADESAIFYPRGVSIMIGLLVLGLILVSLQISIFWILNRR IKAKTGNGVLNIL* |
| Coding | >Pro_DTO070G2_2|g9200.t1 ATGTTCCTGGGTGTTATTATACTTGAGATTCCATCAAATATTATTCTACACAAGATTGGGCCTCGCCAATGGATC AGTGGACAGGTCTGCATCTTCGGCATAATCGCATGTTTGCAAATATTTGTGCGCAATAAGTTGGGCTTCCTACTC ACTAGAACATTTTTGGGTCTTGCCGAAGCTGGGTATATCCCCGGTGCAATGTATACTCTTTCCACCTGGTATACC AAGGAAGAATTGACAAAACGTATCGCCATATTCTTCTTTGGTATGTTTGGCGGAACCGCTATTTCTCCGCTTCTT GGGGCTGCTTTTTTGAAACTGGACGGGAAAGGTGGTCTCTTTGGCTGGCAATGGATCTTCCTCGTCGAGGGTTTA TTCTCCGTTGCGGTATCATTCGTTCTATTTTTCTTTCTTCCTGAACACAAGAAAGTCCCTGTGTCGACCGATGAA GTGAACATTTCGGAGTCTGGAGGACTTCGCCTAACGGAGAAACCATTGGCCCATCCTGGCAAAACGCACATATCA CTTAGCTTGGTTTGGAAGACATTGACAAGCTTTCAAAAATGGCCGCATTTTATTGCCACGGGCTGTGTCTTCGCT ACCTGGAGCCCTCTGACAACATATACCCCAAGCATTTTCATGGAACTGGGGTTTCCCCGAGTTAGGGCAAATGCA TTGTGTGCAATCGGAAGTTTGCTCACTCTCCCCGTGATTTTGGTTTTTGCGTGGATCAGCGACAAATCGAATAAG AGGGGCCTTACCGTCATCGTTGCTATCTTCGTGTACTTGATCGCGTTGGTAATTCTAAGAATCGCAGTTCACCAT GTGGATAAATGGGGCAAGTTCGGCCTCTGGACAACAGTCAATGCCCTGGCTGTGGGCTATCATCCAATTCACAAT TCTTGGATCCAAATCAACTGCAAGAGCTCTGAAGAAAGGAATATAAGTGTTGCAATGTTCGTCATGTCAGCTACA GCGGGGCTCATGGCAGGAACCCAGATATTTCGGGCGGACGAGTCAGCTATATTTTATCCAAGAGGGGTGTCAATT ATGATTGGACTACTAGTTTTGGGACTGATTCTTGTATCCCTACAAATCTCGATATTCTGGATCCTAAACAGGCGT ATCAAAGCAAAAACTGGCAACGGGGTCTTGAACATTCTATAG |
| Transcript | >Pro_DTO070G2_2|g9200.t1 ATGTTCCTGGGTGTTATTATACTTGAGATTCCATCAAATATTATTCTACACAAGATTGGGCCTCGCCAATGGATC AGTGGACAGGTCTGCATCTTCGGCATAATCGCATGTTTGCAAATATTTGTGCGCAATAAGTTGGGCTTCCTACTC ACTAGAACATTTTTGGGTCTTGCCGAAGCTGGGTATATCCCCGGTGCAATGTATACTCTTTCCACCTGGTATACC AAGGAAGAATTGACAAAACGTATCGCCATATTCTTCTTTGGTATGTTTGGCGGAACCGCTATTTCTCCGCTTCTT GGGGCTGCTTTTTTGAAACTGGACGGGAAAGGTGGTCTCTTTGGCTGGCAATGGATCTTCCTCGTCGAGGGTTTA TTCTCCGTTGCGGTATCATTCGTTCTATTTTTCTTTCTTCCTGAACACAAGAAAGTCCCTGTGTCGACCGATGAA GTGAACATTTCGGAGTCTGGAGGACTTCGCCTAACGGAGAAACCATTGGCCCATCCTGGCAAAACGCACATATCA CTTAGCTTGGTTTGGAAGACATTGACAAGCTTTCAAAAATGGCCGCATTTTATTGCCACGGGCTGTGTCTTCGCT ACCTGGAGCCCTCTGACAACATATACCCCAAGCATTTTCATGGAACTGGGGTTTCCCCGAGTTAGGGCAAATGCA TTGTGTGCAATCGGAAGTTTGCTCACTCTCCCCGTGATTTTGGTTTTTGCGTGGATCAGCGACAAATCGAATAAG AGGGGCCTTACCGTCATCGTTGCTATCTTCGTGTACTTGATCGCGTTGGTAATTCTAAGAATCGCAGTTCACCAT GTGGATAAATGGGGCAAGTTCGGCCTCTGGACAACAGTCAATGCCCTGGCTGTGGGCTATCATCCAATTCACAAT TCTTGGATCCAAATCAACTGCAAGAGCTCTGAAGAAAGGAATATAAGTGTTGCAATGTTCGTCATGTCAGCTACA GCGGGGCTCATGGCAGGAACCCAGATATTTCGGGCGGACGAGTCAGCTATATTTTATCCAAGAGGGGTGTCAATT ATGATTGGACTACTAGTTTTGGGACTGATTCTTGTATCCCTACAAATCTCGATATTCTGGATCCTAAACAGGCGT ATCAAAGCAAAAACTGGCAACGGGGTCTTGAACATTCTATAG |
| Gene | >Pro_DTO070G2_2|g9200.t1 ATGTTCCTGGGTGTTATTATACTTGAGATTCCATCAAATATTATTCTACACAAGGTATGTCGCATCAATTTCCGG ATGATTCCGTCTGATTGAGTTGAATTAGATTGGGCCTCGCCAATGGATCAGTGGACAGGTCTGCATCTTCGGCAT AATCGCATGTTTGCAAATATTTGTGCGCAATAAGTTGGGCTTCCTACTCACTAGAACATTTTTGGGTCTTGCCGA AGCTGGGTATATCCCCGGTGCAATGTATACTCTTTCCACCTGGTATACCAAGGAAGAATTGACAAAACGTATCGC CATATTCTTCTTTGGTATGTTTGGCGGAACCGCTATTTCTCCGCTTCTTGGGGCTGCTTTTTTGAAACTGGACGG GAAAGGTGGTCTCTTTGGCTGGCAATGGATCTTCCTCGGTACGATTGGGGCTGGTCCCTCAAACGTCGAAATATG CTAACAAATATGTAGTCGAGGGTTTATTCTCCGTTGCGGTATCATTCGTTCTATTTTTCTTTCTTCCTGAACACA AGAAAGTCCCTGTGTCGACCGATGAAGTGAACATTTCGGAGTCTGGAGGACTTCGCCTAACGGAGAAACCATTGG CCCATCCTGGCAAAACGCACATATCACTTAGCTTGGTTTGGAAGACATTGACAAGCTTTCAAAAATGGCCGCATT TTATTGCCACGGGCTGTGTCTTCGCTACCTGGAGCCCTCTGACAACATATACCCCAAGCATTTTCATGGAACTGG GGTTTCCCCGAGTTAGGGCAAATGCATTGTGTGCAATCGGAAGTTTGCTCACTCTCCCCGTGATTTTGGTTTTTG CGTGGATCAGCGACAAATCGAATAAGAGGGGCCTTACCGTCATCGTTGCTATCTTCGTGTACTTGATCGCGTTGG TAATTCTAAGAATCGCAGTTCACCATGTGGATAAATGGGGCAAGTTCGGCCTCTGGACAACAGTCAATGCCCTGG CTGTGGGCTATCATCCAATTCACAATTCTTGGATCCAAATCAACTGCAAGAGCTCTGAAGAAAGGAATATAAGTG TTGCGTGAGTAAAACCTGTCCTATTGGGCGTTCTTCGGACAGATCAGCTAACACTCCTTCAACATATAGAATGTG TAAGACTACTACCTCTATATCAGACAGGCTTTTTCTTTACTAACTCAATGAAGTCGTCATGTCAGCTACAGCGGG GCTCATGGCAGGAACCCAGATATTTCGGGCGGACGAGTCAGCTATATTGTAAGTCCTATACTTGCGGATTATACC CCATTCGTACCACTAATGCTAAATCTATTAACCTTGTAGTTATCCAAGAGGGGTGTCAATTATGATTGGACTACT AGTTTTGGGACTGATTCTTGTATCCCTACAAATCTCGATATTCTGGATCCTAAACAGGCGTATCAAAGCAAAAAC TGGCAACGGGGTCTTGAACATTCTATAG |