Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO070G2_2|g9066.t1
Gene name
Locationscaffold_23:254988..256008
Strand-
Gene length (bp)1020
Transcript length (bp)651
Coding sequence length (bp)651
Protein length (aa) 217

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF02466 Tim17 Tim17/Tim22/Tim23/Pmp24 family 1.2E-13 20 130

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 27 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO070G2_2|g9066.t1
MDVLLSQLNALVLKPELAPLLSLVKGARNGIVYGSKVRFPHALVMIFLFRSGTIREKTKLVLKATRLHARNLATF
ALIYKASMIVLRNIPAGAGKEGRYDSFFAGLLGGYAVFGRQPGSISKQIVIYVFARVMLALAKLSVQPKMHPLSS
LITSDARSQIMNNAYPVFAGMTWAMVMYIFRWHPETLASSLRSSMVYIYGDSDHWDSLRTLLLHNK*
Coding >Pro_DTO070G2_2|g9066.t1
ATGGATGTATTGCTCTCCCAACTGAACGCGCTCGTTCTAAAGCCCGAACTCGCACCGCTACTGTCATTAGTGAAG
GGTGCACGCAATGGAATCGTCTACGGATCGAAAGTTCGCTTTCCGCATGCGCTGGTAATGATATTTCTGTTCAGA
TCTGGAACGATACGTGAAAAGACGAAGCTTGTTTTGAAAGCAACCCGCCTGCATGCGCGTAACCTGGCCACATTT
GCCCTCATATACAAGGCATCCATGATCGTGCTCCGGAATATACCAGCTGGCGCCGGGAAAGAAGGCCGATATGAT
AGCTTCTTCGCAGGCCTGCTGGGCGGGTATGCGGTTTTTGGACGACAGCCGGGCAGTATTAGCAAGCAGATTGTT
ATTTATGTCTTCGCGCGTGTGATGCTTGCTCTCGCTAAACTCTCCGTCCAACCAAAAATGCACCCTCTTTCCTCC
CTCATCACGTCCGATGCTCGCAGTCAGATCATGAATAATGCTTACCCCGTTTTCGCCGGTATGACCTGGGCGATG
GTCATGTACATTTTCCGGTGGCACCCGGAGACGCTGGCGTCGAGCCTGCGGAGTAGCATGGTGTATATTTACGGC
GACTCAGACCATTGGGATTCCCTCCGCACTCTGCTTCTACACAACAAATGA
Transcript >Pro_DTO070G2_2|g9066.t1
ATGGATGTATTGCTCTCCCAACTGAACGCGCTCGTTCTAAAGCCCGAACTCGCACCGCTACTGTCATTAGTGAAG
GGTGCACGCAATGGAATCGTCTACGGATCGAAAGTTCGCTTTCCGCATGCGCTGGTAATGATATTTCTGTTCAGA
TCTGGAACGATACGTGAAAAGACGAAGCTTGTTTTGAAAGCAACCCGCCTGCATGCGCGTAACCTGGCCACATTT
GCCCTCATATACAAGGCATCCATGATCGTGCTCCGGAATATACCAGCTGGCGCCGGGAAAGAAGGCCGATATGAT
AGCTTCTTCGCAGGCCTGCTGGGCGGGTATGCGGTTTTTGGACGACAGCCGGGCAGTATTAGCAAGCAGATTGTT
ATTTATGTCTTCGCGCGTGTGATGCTTGCTCTCGCTAAACTCTCCGTCCAACCAAAAATGCACCCTCTTTCCTCC
CTCATCACGTCCGATGCTCGCAGTCAGATCATGAATAATGCTTACCCCGTTTTCGCCGGTATGACCTGGGCGATG
GTCATGTACATTTTCCGGTGGCACCCGGAGACGCTGGCGTCGAGCCTGCGGAGTAGCATGGTGTATATTTACGGC
GACTCAGACCATTGGGATTCCCTCCGCACTCTGCTTCTACACAACAAATGA
Gene >Pro_DTO070G2_2|g9066.t1
ATGGATGTATTGCTCGTGAGTTCCGGAGCGTATCCGACTATACACAGCAGTATTGACATTCTCCTCCGCAGTCCC
AACTGAACGCGCTCGTTCTAAAGCCCGAACTCGCACCGCTACTGTCATTAGTGAAGGGTGCACGCAATGGAATCG
TCTACGGATCGAAAGTTCGCTTTCCGCATGCGCTGGTGTATGTTAGACCTTGGACAGCCGAAAACCCCGGTATAT
GGCATAGCTGACTGACTGCGACTGCTTCTAGAATGATATTTCTGTTCAGATCTGGAACGTACGTCCCCACGCGCG
ACCTCACCCCCCAGAACGAAACTGATAGCTTTGTTATTCAGGATACGTGAAAAGACGAAGCTTGTTTTGAAAGCA
ACCCGCCTGCATGCGCGTAACCTGGCCACATTTGCCCTCATATACAAGGCATCCATGATCGTGCTCCGGAATATA
CCAGCTGGCGCCGGGAAAGAAGGCCGATATGATAGCTTCTTCGCAGGCCTGCTGGGCGGGTATGCGGTTTTTGGA
CGACAGCCGGGCAGTATTAGCAAGCAGGTATGTAATTTGGACATGCGCCTGATTGTGGGAACTATTCAAACCTCG
ACTCCCGAATACACTCCTTCTCTGCAGAGCTAACTCGAATCTAGATTGTTATTTATGTCTTCGCGCGTGTGATGC
TTGCTCTCGCTAAACTCTCCGTCCAACCAAAAATGCACCCTCTTTCCTCCCTCATCACGTCCGATGCTCGCAGTC
AGATCATGAATAATGCTTACCCCGTTTTCGCCGGTATGACCTGGGCGATGGTCATGTACATTTTCCGGTGGCACC
CGGAGACGCTGGCGTCGAGCCTGCGGAGTAGCATGGTGTATATGTATGTTTACCCTCCACTATATATGATTAGCC
TCAGTTTGAGTACTTTGAAAGTTCGAGTTATTTTCCAATGCTAACATTCATGTCAACAACAGTTACGGCGACTCA
GACCATTGGGATTCCCTCCGCACTCTGCTTCTACACAACAAATGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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