© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Pro_DTO070G2_2|g8748.t1 |
| Gene name | |
| Location | scaffold_20:343292..344796 |
| Strand | + |
| Gene length (bp) | 1504 |
| Transcript length (bp) | 1326 |
| Coding sequence length (bp) | 1326 |
| Protein length (aa) | 442 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF07690 | MFS_1 | Major Facilitator Superfamily | 6.9E-18 | 62 | 368 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0006810 | transport | No |
| GO:0005215 | transporter activity | No |
| GO:0051179 | localization | No |
| GO:0009987 | cellular process | No |
| GO:0003674 | molecular_function | No |
| GO:0051234 | establishment of localization | No |
| GO:0008150 | biological_process | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 61 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 46 | 68 | 22 |
| 2 | 83 | 105 | 22 |
| 3 | 112 | 130 | 18 |
| 4 | 140 | 162 | 22 |
| 5 | 175 | 197 | 22 |
| 6 | 201 | 223 | 22 |
| 7 | 247 | 269 | 22 |
| 8 | 282 | 304 | 22 |
| 9 | 325 | 347 | 22 |
| 10 | 413 | 435 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Pro_DTO070G2_2|g8748.t1 MEPKEYSPSFTSRSTSFIPFDQQSDSRIILDDEKLPPVDGGVQAWLFLMASAMLEALVWGYAFAFGIFQDYYSTH EPFKGSENIAIIGTCAMGIAYLIAPLAIILMILVPKIARWVSTIGVVIMCLSLALSSFSTNVVHLILSQGIGFGI GGCFAYTPTILFMSEWFDKRKGLAFGIVWGGSGVSGIVFPLAIQWLLNQYGIEATLQISSVALFILAVPFLYFHR PRLRTTEVAYHRLNFRFLYNKVFIIYQLGNTLEAIGFFLPTIYLPTYARSLGATDYMASLTVMLVNLFAVFGSVI MGFLSDRYHITTCILMSTVGTVIAVFFVWGFAATIPPLYVFCIAYGLLAGGFSSTWAGVSNEVQKANPLADATVI FPFMETGRGIGNVASGPLSEALLKADNWRGHALGAYGTGYGTLVVCTGATALIGGLSVVARHLKWI* |
| Coding | >Pro_DTO070G2_2|g8748.t1 ATGGAGCCTAAGGAGTATTCTCCTAGTTTCACCAGCCGGAGTACATCCTTCATACCCTTCGACCAACAGTCCGAC AGCAGAATCATTTTAGACGATGAGAAGTTGCCGCCGGTTGATGGTGGAGTTCAAGCATGGCTGTTTCTTATGGCA TCTGCAATGCTCGAAGCTCTAGTTTGGGGTTATGCATTCGCCTTTGGTATATTCCAAGACTATTATAGTACACAC GAGCCATTCAAAGGATCCGAAAACATTGCAATTATTGGCACTTGTGCGATGGGTATCGCATATCTGATTGCCCCG TTGGCAATAATTTTGATGATCTTAGTGCCTAAAATTGCTCGCTGGGTGTCCACCATAGGAGTTGTTATCATGTGT TTGTCTTTGGCACTGAGTTCCTTCTCTACCAACGTCGTGCATCTTATTTTGTCACAAGGAATCGGCTTCGGAATT GGTGGATGCTTTGCCTATACTCCCACCATCCTATTCATGTCGGAGTGGTTCGATAAACGAAAAGGGCTGGCTTTT GGTATTGTCTGGGGCGGGTCCGGTGTATCCGGAATTGTCTTCCCACTTGCCATCCAGTGGCTTTTGAACCAGTAT GGCATTGAGGCTACGCTTCAAATATCCTCAGTGGCATTGTTCATTCTTGCTGTGCCTTTTCTCTACTTTCATCGA CCGAGGCTGCGTACGACAGAAGTTGCATATCACCGTTTGAATTTTCGATTCTTATACAACAAAGTTTTTATAATT TACCAGCTCGGCAACACGCTGGAAGCAATCGGATTCTTCTTGCCGACAATATACCTTCCGACCTACGCACGCAGT CTAGGTGCGACTGACTACATGGCGTCTCTCACCGTAATGCTCGTGAATTTGTTTGCAGTGTTTGGTTCTGTCATC ATGGGATTCCTTTCCGACCGATATCACATCACTACCTGCATTTTGATGTCGACTGTCGGTACCGTTATCGCAGTC TTTTTTGTTTGGGGGTTTGCTGCCACTATTCCCCCTTTATACGTCTTTTGTATCGCCTATGGTCTTCTCGCGGGT GGCTTTTCCTCCACATGGGCGGGTGTCTCCAACGAGGTGCAGAAGGCCAATCCATTGGCAGACGCGACTGTCATT TTCCCATTCATGGAAACAGGGCGTGGAATTGGCAATGTGGCAAGTGGCCCCCTAAGTGAGGCTCTGCTCAAGGCA GACAACTGGCGAGGACATGCGTTGGGTGCATATGGCACTGGCTACGGGACACTCGTTGTTTGCACCGGCGCAACT GCATTGATAGGCGGATTATCTGTGGTGGCCCGGCACTTAAAGTGGATATAA |
| Transcript | >Pro_DTO070G2_2|g8748.t1 ATGGAGCCTAAGGAGTATTCTCCTAGTTTCACCAGCCGGAGTACATCCTTCATACCCTTCGACCAACAGTCCGAC AGCAGAATCATTTTAGACGATGAGAAGTTGCCGCCGGTTGATGGTGGAGTTCAAGCATGGCTGTTTCTTATGGCA TCTGCAATGCTCGAAGCTCTAGTTTGGGGTTATGCATTCGCCTTTGGTATATTCCAAGACTATTATAGTACACAC GAGCCATTCAAAGGATCCGAAAACATTGCAATTATTGGCACTTGTGCGATGGGTATCGCATATCTGATTGCCCCG TTGGCAATAATTTTGATGATCTTAGTGCCTAAAATTGCTCGCTGGGTGTCCACCATAGGAGTTGTTATCATGTGT TTGTCTTTGGCACTGAGTTCCTTCTCTACCAACGTCGTGCATCTTATTTTGTCACAAGGAATCGGCTTCGGAATT GGTGGATGCTTTGCCTATACTCCCACCATCCTATTCATGTCGGAGTGGTTCGATAAACGAAAAGGGCTGGCTTTT GGTATTGTCTGGGGCGGGTCCGGTGTATCCGGAATTGTCTTCCCACTTGCCATCCAGTGGCTTTTGAACCAGTAT GGCATTGAGGCTACGCTTCAAATATCCTCAGTGGCATTGTTCATTCTTGCTGTGCCTTTTCTCTACTTTCATCGA CCGAGGCTGCGTACGACAGAAGTTGCATATCACCGTTTGAATTTTCGATTCTTATACAACAAAGTTTTTATAATT TACCAGCTCGGCAACACGCTGGAAGCAATCGGATTCTTCTTGCCGACAATATACCTTCCGACCTACGCACGCAGT CTAGGTGCGACTGACTACATGGCGTCTCTCACCGTAATGCTCGTGAATTTGTTTGCAGTGTTTGGTTCTGTCATC ATGGGATTCCTTTCCGACCGATATCACATCACTACCTGCATTTTGATGTCGACTGTCGGTACCGTTATCGCAGTC TTTTTTGTTTGGGGGTTTGCTGCCACTATTCCCCCTTTATACGTCTTTTGTATCGCCTATGGTCTTCTCGCGGGT GGCTTTTCCTCCACATGGGCGGGTGTCTCCAACGAGGTGCAGAAGGCCAATCCATTGGCAGACGCGACTGTCATT TTCCCATTCATGGAAACAGGGCGTGGAATTGGCAATGTGGCAAGTGGCCCCCTAAGTGAGGCTCTGCTCAAGGCA GACAACTGGCGAGGACATGCGTTGGGTGCATATGGCACTGGCTACGGGACACTCGTTGTTTGCACCGGCGCAACT GCATTGATAGGCGGATTATCTGTGGTGGCCCGGCACTTAAAGTGGATATAA |
| Gene | >Pro_DTO070G2_2|g8748.t1 ATGGAGCCTAAGGAGTATTCTCCTAGTTTCACCAGCCGGAGTACATCCTTCATACCCTTCGACCAACAGTCCGAC AGCAGAATCATTTTAGACGATGAGAAGTTGCCGCCGGTTGATGGTGGAGTTCAAGCATGGCTGTTTCTTATGGCA TCTGCAATGCTCGAAGCTCTAGTTTGGGGTACGTTCTTATTGTTCTTGGTCGAAGATGGATTTTTGTTGAAACTA ACACGCGACTAGGTTATGCATTCGCCTTTGGTATATTCCAAGACTATTATAGTACACACGAGCCATTCAAAGGAT CCGAAAACATTGCAATTATTGGCACTTGTGCGATGGTTGGTTGGCAAGATACTCAAGGTCGCCCTCTCTCGCTAA CACAACATATAGGGTATCGCATATCTGATTGCCCCGTTGGCAATAATTTTGATGATCTTAGTGCCTAAAATTGCT CGCTGGGTGTCCACCATAGGAGTTGTTATCATGTGTTTGTCTTTGGCACTGAGTTCCTTCTCTACCAACGTCGTG CATCTTATTTTGTCACAAGGAATCGGCTTCGGAATTGGTGGATGCTTTGCCTATACTCCCACCATCCTATTCATG TCGGAGTGGTTCGATAAACGAAAAGGGCTGGCTTTTGGTATTGTCTGGGTGAGTTACACAGAATGCTGCACCATG AGCTCCCTCTGATGGAAAGTCGAACTGATATATGTCTTAGGGCGGGTCCGGTGTATCCGGAATTGTCTTCCCACT TGCCATCCAGTGGCTTTTGAACCAGTATGGCATTGAGGCTACGCTTCAAATATCCTCAGTGGCATTGTTCATTCT TGCTGTGCCTTTTCTCTACTTTCATCGACCGAGGCTGCGTACGACAGAAGTTGCATATCACCGTTTGAATTTTCG ATTCTTATACAACAAAGTTTTTATAATTTACCAGCTCGGCAACACGCTGGAAGCAATCGGATTCTTCTTGCCGAC AATATACCTTCCGACCTACGCACGCAGTCTAGGTGCGACTGACTACATGGCGTCTCTCACCGTAATGCTCGTGAA TTTGTTTGCAGTGTTTGGTTCTGTCATCATGGGATTCCTTTCCGACCGATATCACATCACTACCTGCATTTTGAT GTCGACTGTCGGTACCGTTATCGCAGTCTTTTTTGTTTGGGGGTTTGCTGCCACTATTCCCCCTTTATACGTCTT TTGTATCGCCTATGGTCTTCTCGCGGGTGGCTTTTCCTCCACATGGGCGGGTGTCTCCAACGAGGTGCAGAAGGC CAATCCATTGGCAGACGCGACTGTCATTTTCCCATTCATGGAAACAGGGCGTGGAATTGGCAATGTGGCAAGTGG CCCCCTAAGTGAGGCTCTGCTCAAGGCAGACAACTGGCGAGGACATGCGTTGGGTGCATATGGCACTGGCTACGG GACACTCGTTGTTTGCACCGGCGCAACTGCATTGATAGGCGGATTATCTGTGGTGGCCCGGCACTTAAAGTGGAT ATAA |