Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO070G2_2|g8736.t1
Gene name
Locationscaffold_20:304269..304896
Strand-
Gene length (bp)627
Transcript length (bp)549
Coding sequence length (bp)549
Protein length (aa) 183

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00959 Phage_lysozyme Phage lysozyme 3.8E-16 49 163

GO

GO Term Description Terminal node
GO:0003796 lysozyme activity Yes
GO:0016998 cell wall macromolecule catabolic process Yes
GO:0009253 peptidoglycan catabolic process Yes
GO:0044036 cell wall macromolecule metabolic process No
GO:0006022 aminoglycan metabolic process No
GO:0009987 cellular process No
GO:0000270 peptidoglycan metabolic process No
GO:0061783 peptidoglycan muralytic activity No
GO:1901564 organonitrogen compound metabolic process No
GO:0008152 metabolic process No
GO:0016798 hydrolase activity, acting on glycosyl bonds No
GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds No
GO:1901135 carbohydrate derivative metabolic process No
GO:0006026 aminoglycan catabolic process No
GO:0009057 macromolecule catabolic process No
GO:0008150 biological_process No
GO:1901136 carbohydrate derivative catabolic process No
GO:0044248 cellular catabolic process No
GO:0006807 nitrogen compound metabolic process No
GO:0003674 molecular_function No
GO:0043170 macromolecule metabolic process No
GO:0030203 glycosaminoglycan metabolic process No
GO:0016787 hydrolase activity No
GO:0009056 catabolic process No
GO:1901575 organic substance catabolic process No
GO:0071704 organic substance metabolic process No
GO:0044260 cellular macromolecule metabolic process No
GO:0044265 cellular macromolecule catabolic process No
GO:0044237 cellular metabolic process No
GO:0003824 catalytic activity No
GO:0006027 glycosaminoglycan catabolic process No
GO:1901565 organonitrogen compound catabolic process No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 17 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO070G2_2|g8736.t1
MSFKLLLATLPALAFAACTGPAVNTNGLDLIKSFESFQANVYDDGYGNPTIGYGHLCSDSTCSEVTFSKPLTEDT
ASQLLAKDLVTYQNGVTNALATAVTLNDNQYAALVSWTFNVGVGNMQSSSLVSRMNAGENVETVASEELPKWNKA
NGAVVAGLTRRRADEVKLFEEASQTKALPVGC*
Coding >Pro_DTO070G2_2|g8736.t1
ATGTCGTTCAAGCTCCTGCTTGCCACCCTCCCAGCCCTGGCATTTGCTGCCTGCACCGGTCCTGCTGTCAACACC
AACGGCCTTGATCTAATCAAGAGCTTTGAATCCTTCCAAGCAAACGTGTACGATGATGGCTACGGCAATCCCACC
ATCGGCTACGGCCATCTCTGCAGCGACTCCACTTGCTCGGAAGTGACATTCTCCAAGCCATTGACCGAGGATACA
GCGAGCCAATTGCTTGCCAAAGACCTAGTGACCTACCAAAATGGCGTAACAAACGCCCTTGCCACCGCGGTTACT
CTGAACGACAACCAGTACGCGGCGCTCGTTTCGTGGACGTTCAACGTCGGCGTCGGGAACATGCAGTCATCCAGT
CTAGTCAGCCGCATGAATGCCGGTGAGAATGTGGAGACTGTGGCATCTGAGGAATTGCCCAAGTGGAATAAAGCC
AATGGGGCGGTTGTTGCTGGGCTGACGCGCCGGCGGGCTGATGAAGTGAAGCTGTTCGAGGAGGCTTCTCAGACC
AAGGCTTTGCCTGTTGGCTGTTAA
Transcript >Pro_DTO070G2_2|g8736.t1
ATGTCGTTCAAGCTCCTGCTTGCCACCCTCCCAGCCCTGGCATTTGCTGCCTGCACCGGTCCTGCTGTCAACACC
AACGGCCTTGATCTAATCAAGAGCTTTGAATCCTTCCAAGCAAACGTGTACGATGATGGCTACGGCAATCCCACC
ATCGGCTACGGCCATCTCTGCAGCGACTCCACTTGCTCGGAAGTGACATTCTCCAAGCCATTGACCGAGGATACA
GCGAGCCAATTGCTTGCCAAAGACCTAGTGACCTACCAAAATGGCGTAACAAACGCCCTTGCCACCGCGGTTACT
CTGAACGACAACCAGTACGCGGCGCTCGTTTCGTGGACGTTCAACGTCGGCGTCGGGAACATGCAGTCATCCAGT
CTAGTCAGCCGCATGAATGCCGGTGAGAATGTGGAGACTGTGGCATCTGAGGAATTGCCCAAGTGGAATAAAGCC
AATGGGGCGGTTGTTGCTGGGCTGACGCGCCGGCGGGCTGATGAAGTGAAGCTGTTCGAGGAGGCTTCTCAGACC
AAGGCTTTGCCTGTTGGCTGTTAA
Gene >Pro_DTO070G2_2|g8736.t1
ATGTCGTTCAAGCTCCTGCTTGCCACCCTCCCAGCCCTGGCATTTGCTGCCTGCACCGGTCCTGCTGTCAACACC
AACGGCCTTGATCTAATCAAGAGCTTTGAATCCTTCCAAGCAAACGTGTACGATGATGGCTACGGCAATCCCACC
ATCGGCTACGGCCATCTCTGCAGCGACTCCACTTGCTCGGAAGTGACATTCTCCAAGCCATTGACCGAGGATACA
GCGAGCCAATTGCTTGCCAAAGACCTAGTGGTAAGTCTCTACAAGCACTCTTCCTCCCTAAAACCCCACTATGTA
GGTATCTAATGAATGTACTAACCCGGAAAATAGACCTACCAAAATGGCGTAACAAACGCCCTTGCCACCGCGGTT
ACTCTGAACGACAACCAGTACGCGGCGCTCGTTTCGTGGACGTTCAACGTCGGCGTCGGGAACATGCAGTCATCC
AGTCTAGTCAGCCGCATGAATGCCGGTGAGAATGTGGAGACTGTGGCATCTGAGGAATTGCCCAAGTGGAATAAA
GCCAATGGGGCGGTTGTTGCTGGGCTGACGCGCCGGCGGGCTGATGAAGTGAAGCTGTTCGAGGAGGCTTCTCAG
ACCAAGGCTTTGCCTGTTGGCTGTTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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