© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Pro_DTO070G2_2|g8727.t1 |
| Gene name | |
| Location | scaffold_20:275261..276894 |
| Strand | - |
| Gene length (bp) | 1633 |
| Transcript length (bp) | 1533 |
| Coding sequence length (bp) | 1533 |
| Protein length (aa) | 511 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF07690 | MFS_1 | Major Facilitator Superfamily | 5.0E-33 | 54 | 423 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0006810 | transport | No |
| GO:0005215 | transporter activity | No |
| GO:0051179 | localization | No |
| GO:0009987 | cellular process | No |
| GO:0003674 | molecular_function | No |
| GO:0051234 | establishment of localization | No |
| GO:0008150 | biological_process | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 40 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 45 | 62 | 17 |
| 2 | 86 | 108 | 22 |
| 3 | 115 | 137 | 22 |
| 4 | 141 | 163 | 22 |
| 5 | 176 | 198 | 22 |
| 6 | 213 | 232 | 19 |
| 7 | 285 | 307 | 22 |
| 8 | 317 | 334 | 17 |
| 9 | 347 | 365 | 18 |
| 10 | 375 | 394 | 19 |
| 11 | 406 | 428 | 22 |
| 12 | 438 | 460 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Pro_DTO070G2_2|g8727.t1 MAGTEDAITEAELGMKMDLSHEEVVHMAELTEEEKVIEKALRKRIDALIMPLAILVYLMNYIDRNNYAAAKLQGL EEDLKLDDTKYQTGLSILFVGYILMQVPSNMLLNYMGRPSLYIGFFVCAWGLVSAVTSQVSSYGGIVACRFILGL VEAPFFCAILFYLSKWYTKKELAFRMSIFYSGSLLSGAFGNLIAAGILNGLRGHRGLSAWQWLYIIEGSITCAIG LVICVVLPDFPETWKLLSPEMRKVAQRRLAIEAGQADVDEGGGRSQVEGFRLAMTDIKTYVFALAYMCITGAAGF QNFFPTLVKTLDLPETITLVLVAPPYLFMVVYSLCHSMASDRLEKRFWFFIYPIPITIIGFVIFMKTDSFGPRYF SFFLMVFVFAQNGTLYSWLASSIPRPPAKRAVAFAFFNSIGNSASIWTPYTYLDKEKPHYPMAMGVCIALQIIAG LAALFLYFNLRMLNKRQERMENEEMQLSEKDIRRLQATADIEGIDISAARRLQKGFRYVL* |
| Coding | >Pro_DTO070G2_2|g8727.t1 ATGGCCGGAACTGAAGATGCCATCACCGAGGCGGAGTTGGGGATGAAGATGGACTTGAGCCATGAGGAAGTTGTC CATATGGCAGAGTTGACCGAGGAGGAGAAAGTTATCGAGAAGGCATTGCGCAAGCGCATTGATGCCCTGATCATG CCACTGGCTATTCTGGTCTACCTCATGAATTATATCGATCGCAACAATTACGCAGCAGCAAAGCTCCAAGGTCTC GAAGAAGATCTCAAACTTGACGATACAAAGTACCAAACCGGTCTCTCTATTCTCTTCGTTGGATATATTCTCATG CAAGTGCCTTCGAACATGCTCCTAAACTACATGGGTCGGCCATCCCTGTACATCGGTTTCTTCGTCTGCGCTTGG GGCCTGGTATCGGCGGTGACAAGTCAAGTCTCAAGCTATGGAGGCATTGTGGCCTGCCGATTCATTCTTGGTTTG GTCGAAGCGCCCTTCTTCTGTGCCATTCTCTTCTATCTGTCTAAATGGTATACCAAGAAGGAATTGGCGTTTCGA ATGAGTATTTTCTACTCCGGCTCCCTGCTGAGTGGCGCTTTCGGAAATCTCATCGCTGCGGGTATTCTCAACGGC CTCAGAGGCCACCGAGGACTTTCCGCATGGCAATGGCTCTATATTATTGAAGGTTCTATCACATGCGCTATCGGA CTGGTCATTTGCGTCGTTCTACCCGACTTTCCGGAGACATGGAAGCTTTTGTCCCCCGAGATGCGCAAAGTTGCC CAGCGGCGTCTTGCCATTGAGGCTGGCCAGGCCGATGTGGATGAAGGGGGTGGCAGAAGCCAGGTTGAGGGGTTC AGACTCGCCATGACCGACATCAAGACATATGTATTCGCCTTGGCATATATGTGCATCACCGGAGCGGCGGGTTTC CAGAACTTCTTCCCGACATTGGTCAAGACTCTCGACTTGCCGGAAACCATCACCCTGGTGCTGGTGGCGCCCCCC TATCTCTTCATGGTTGTATATTCTCTTTGTCACTCCATGGCCTCTGATAGATTGGAGAAGAGATTCTGGTTCTTC ATCTACCCGATCCCAATCACCATCATTGGGTTCGTTATTTTCATGAAAACCGATTCTTTTGGACCACGATACTTC TCATTCTTCTTGATGGTCTTCGTCTTCGCCCAGAATGGAACTCTCTATTCCTGGCTCGCGAGCTCCATTCCTCGT CCACCGGCCAAGCGTGCTGTCGCCTTTGCATTTTTCAACTCAATTGGAAATAGCGCTTCAATTTGGACCCCTTAT ACGTACCTCGACAAAGAGAAACCACACTACCCCATGGCTATGGGTGTTTGCATTGCGCTACAGATAATTGCTGGT CTTGCGGCTCTCTTCTTATACTTCAACTTGCGCATGCTCAACAAACGCCAGGAGCGTATGGAAAATGAGGAAATG CAGCTTTCCGAGAAGGATATTCGTCGGCTGCAGGCTACTGCTGATATTGAGGGGATTGATATTTCCGCTGCTAGA CGGCTGCAGAAGGGATTCCGCTATGTATTGTAG |
| Transcript | >Pro_DTO070G2_2|g8727.t1 ATGGCCGGAACTGAAGATGCCATCACCGAGGCGGAGTTGGGGATGAAGATGGACTTGAGCCATGAGGAAGTTGTC CATATGGCAGAGTTGACCGAGGAGGAGAAAGTTATCGAGAAGGCATTGCGCAAGCGCATTGATGCCCTGATCATG CCACTGGCTATTCTGGTCTACCTCATGAATTATATCGATCGCAACAATTACGCAGCAGCAAAGCTCCAAGGTCTC GAAGAAGATCTCAAACTTGACGATACAAAGTACCAAACCGGTCTCTCTATTCTCTTCGTTGGATATATTCTCATG CAAGTGCCTTCGAACATGCTCCTAAACTACATGGGTCGGCCATCCCTGTACATCGGTTTCTTCGTCTGCGCTTGG GGCCTGGTATCGGCGGTGACAAGTCAAGTCTCAAGCTATGGAGGCATTGTGGCCTGCCGATTCATTCTTGGTTTG GTCGAAGCGCCCTTCTTCTGTGCCATTCTCTTCTATCTGTCTAAATGGTATACCAAGAAGGAATTGGCGTTTCGA ATGAGTATTTTCTACTCCGGCTCCCTGCTGAGTGGCGCTTTCGGAAATCTCATCGCTGCGGGTATTCTCAACGGC CTCAGAGGCCACCGAGGACTTTCCGCATGGCAATGGCTCTATATTATTGAAGGTTCTATCACATGCGCTATCGGA CTGGTCATTTGCGTCGTTCTACCCGACTTTCCGGAGACATGGAAGCTTTTGTCCCCCGAGATGCGCAAAGTTGCC CAGCGGCGTCTTGCCATTGAGGCTGGCCAGGCCGATGTGGATGAAGGGGGTGGCAGAAGCCAGGTTGAGGGGTTC AGACTCGCCATGACCGACATCAAGACATATGTATTCGCCTTGGCATATATGTGCATCACCGGAGCGGCGGGTTTC CAGAACTTCTTCCCGACATTGGTCAAGACTCTCGACTTGCCGGAAACCATCACCCTGGTGCTGGTGGCGCCCCCC TATCTCTTCATGGTTGTATATTCTCTTTGTCACTCCATGGCCTCTGATAGATTGGAGAAGAGATTCTGGTTCTTC ATCTACCCGATCCCAATCACCATCATTGGGTTCGTTATTTTCATGAAAACCGATTCTTTTGGACCACGATACTTC TCATTCTTCTTGATGGTCTTCGTCTTCGCCCAGAATGGAACTCTCTATTCCTGGCTCGCGAGCTCCATTCCTCGT CCACCGGCCAAGCGTGCTGTCGCCTTTGCATTTTTCAACTCAATTGGAAATAGCGCTTCAATTTGGACCCCTTAT ACGTACCTCGACAAAGAGAAACCACACTACCCCATGGCTATGGGTGTTTGCATTGCGCTACAGATAATTGCTGGT CTTGCGGCTCTCTTCTTATACTTCAACTTGCGCATGCTCAACAAACGCCAGGAGCGTATGGAAAATGAGGAAATG CAGCTTTCCGAGAAGGATATTCGTCGGCTGCAGGCTACTGCTGATATTGAGGGGATTGATATTTCCGCTGCTAGA CGGCTGCAGAAGGGATTCCGCTATGTATTGTAG |
| Gene | >Pro_DTO070G2_2|g8727.t1 ATGGCCGGAACTGAAGATGCCATCACCGAGGCGGAGTTGGGGATGAAGATGGACTTGAGCCATGAGGAAGTTGTC CATATGGCAGAGTTGACCGAGGAGGAGAAAGTTATCGAGAAGGCATTGCGCAAGCGCATTGATGCCCTGATCATG CCACTGGCTATTCTGGTCTACCTCATGAATTATATCGATCGGTACGTTCATCTCGTCCATGACAGTTCGTCAACG CTAATAGAACCAGCAACAATTACGCAGCAGCAAAGCTCCAAGGTCTCGAAGAAGATCTCAAACTTGACGATACAA AGTACCAAACCGGTCTCTCTATTCTCTTCGTTGGATATATTCTCATGCAAGTGCCTTCGAACATGCTCCTAAACT ACATGGGTCGGCCATCCCTGTACATCGGTTTCTTCGTCTGCGCTTGGGGCCTGGTATCGGCGGTGACAAGTCAAG TCTCAAGCTATGGAGGCATTGTGGCCTGCCGATTCATTCTTGGTTTGGTCGAAGCGCCCTTCTTCTGTGCCATTC TCTTCTATCTGTCTAAATGGTATACCAAGAAGGAATTGGCGTTTCGAATGAGTATTTTCTACTCCGGCTCCCTGC TGAGTGGCGCTTTCGGAAATCTCATCGCTGCGGGTATTCTCAACGGCCTCAGAGGCCACCGAGGACTTTCCGCAT GGCAATGGCTCTATATTATTGAAGGTTCTATCACATGCGCTATCGGACTGGTCATTTGCGTCGTTCTACCCGACT TTCCGGAGACATGGAAGCTTTTGTCCCCCGAGATGCGCAAAGTTGCCCAGCGGCGTCTTGCCATTGAGGCTGGCC AGGCCGATGTGGATGAAGGGGGTGGCAGAAGCCAGGTTGAGGGGTTCAGACTCGCCATGACCGACATCAAGACAT ATGTATTCGCCTTGGCATATATGTGCATCACCGGAGCGGCGGGTTTCCAGAACTTCTTCCCGACATTGGTCAAGA CTCTCGACTTGCCGGAAACCATCACCCTGGTGCTGGTGGCGCCCCCCTATCTCTTCATGGTTGTATATTCTCTTT GTCACTCCATGGCCTCTGATAGATTGGAGAAGAGATTCTGGTTCTTCATCTACCCGATCCCAATCACCATCATTG GGTTCGTTATTTTCATGAAAACCGATTCTTTTGGACCACGATACTTCTCATTCTTCTTGATGGTCTTCGTCTTCG CCCAGAATGGAACTCTCTATTCCTGGCTCGCGAGCTCCATTCCTCGTCCACCGGCCAAGCGTGCTGTCGGTAAGT CATATCCCCTTAGTGTGTTCTATTGATCATCAAACTAATCGAAACAGCCTTTGCATTTTTCAACTCAATTGGAAA TAGCGCTTCAATTTGGACCCCTTATACGTACCTCGACAAAGAGAAACCACACTACCCCATGGCTATGGGTGTTTG CATTGCGCTACAGATAATTGCTGGTCTTGCGGCTCTCTTCTTATACTTCAACTTGCGCATGCTCAACAAACGCCA GGAGCGTATGGAAAATGAGGAAATGCAGCTTTCCGAGAAGGATATTCGTCGGCTGCAGGCTACTGCTGATATTGA GGGGATTGATATTTCCGCTGCTAGACGGCTGCAGAAGGGATTCCGCTATGTATTGTAG |