© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Pro_DTO070G2_2|g8725.t1 |
| Gene name | |
| Location | scaffold_20:272578..274163 |
| Strand | + |
| Gene length (bp) | 1585 |
| Transcript length (bp) | 1416 |
| Coding sequence length (bp) | 1416 |
| Protein length (aa) | 472 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF07690 | MFS_1 | Major Facilitator Superfamily | 1.9E-27 | 89 | 406 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0006810 | transport | No |
| GO:0005215 | transporter activity | No |
| GO:0051179 | localization | No |
| GO:0009987 | cellular process | No |
| GO:0003674 | molecular_function | No |
| GO:0051234 | establishment of localization | No |
| GO:0008150 | biological_process | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 42 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 82 | 104 | 22 |
| 2 | 119 | 137 | 18 |
| 3 | 150 | 167 | 17 |
| 4 | 172 | 194 | 22 |
| 5 | 207 | 229 | 22 |
| 6 | 239 | 261 | 22 |
| 7 | 282 | 304 | 22 |
| 8 | 314 | 336 | 22 |
| 9 | 349 | 366 | 17 |
| 10 | 370 | 392 | 22 |
| 11 | 405 | 427 | 22 |
| 12 | 437 | 459 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Pro_DTO070G2_2|g8725.t1 MQKAATASVQNPVQEPWQSAATSVSEYPTSYPTGHNANFDEEAPRSAFSIVEPPAELSTLTTHLTGHSTDDKFPD GGLQAWCVVAGSFFLLMSTFGVMNTTGILQNYFASHQLASYSPSAVGWIPGLFTFFGLSVSVQVGPMFDRYGPRG ILIAGTLCYVTGLVLLAESHLYWHFVLTLGVLSGTGAALLSTVALASVPQWFDRKAALAIGISMSGAGLGGVIFP FVLRAGFTNLGYKWTIRLLALLVLVMSVLGTALVKARLPKGRSKSTINLRSLQDARFTWLTMGIFALELEVFAGL GLYPTYVVMQGFSTNTSVVLLAVLNVASTAGRLMAGGVADRFGRINTQTALIALGAFAVFVVWLPFGNSLIGLYI FSVIFGLASGSFLSLAPACIGQISKASEVGGRFGLTYSIVSIATLICIPIGGEMLDKVGKRAMVAYLGSVLIVSL GLFVMARWACLSYRWRWQTKI* |
| Coding | >Pro_DTO070G2_2|g8725.t1 ATGCAAAAGGCTGCCACCGCATCTGTGCAAAATCCAGTTCAAGAGCCATGGCAGTCGGCTGCGACAAGCGTTTCG GAATATCCCACTAGTTATCCCACTGGTCACAATGCAAACTTCGACGAAGAAGCTCCCCGGTCGGCATTTTCCATA GTCGAGCCGCCGGCCGAGCTATCCACACTCACAACTCATCTGACCGGTCATAGTACCGACGACAAATTCCCAGAT GGAGGGTTGCAAGCGTGGTGTGTTGTGGCAGGTTCATTCTTTCTCTTGATGAGTACATTCGGTGTGATGAACACG ACGGGAATCCTGCAGAATTACTTCGCTTCCCATCAGCTAGCCAGCTATTCGCCGAGTGCAGTCGGCTGGATTCCG GGGCTGTTCACCTTCTTCGGTCTGAGTGTTTCTGTACAGGTTGGGCCGATGTTTGATCGCTATGGACCCAGGGGC ATTCTTATAGCTGGCACTCTATGCTATGTGACTGGCCTTGTTCTTCTCGCCGAAAGCCATCTGTACTGGCATTTT GTTCTTACCCTTGGTGTTCTTTCTGGAACCGGTGCTGCCCTCTTGAGCACAGTGGCATTAGCTAGTGTGCCTCAA TGGTTCGATCGCAAGGCAGCCCTTGCGATTGGGATTTCGATGTCGGGCGCGGGTCTTGGTGGTGTGATATTTCCG TTTGTGCTAAGAGCCGGATTCACCAACCTTGGATATAAGTGGACAATTCGATTACTGGCATTGTTGGTACTGGTG ATGTCTGTCCTTGGAACAGCTCTGGTCAAGGCACGTCTTCCAAAGGGCAGAAGTAAATCAACTATCAACTTGCGT TCCTTGCAAGATGCGAGGTTTACCTGGTTGACAATGGGTATCTTTGCTCTTGAGCTCGAGGTTTTCGCTGGTCTA GGTCTTTATCCAACCTACGTGGTCATGCAGGGGTTTTCTACCAATACCAGTGTCGTTCTTCTGGCTGTTCTCAAC GTAGCATCCACGGCCGGACGACTGATGGCTGGGGGCGTGGCGGATCGGTTTGGCAGAATCAACACCCAGACTGCA CTCATTGCTCTGGGTGCATTCGCAGTGTTCGTGGTCTGGCTGCCGTTTGGAAATTCCCTAATTGGGCTTTATATC TTCTCGGTCATCTTCGGATTGGCTTCAGGATCATTCCTAAGTCTTGCACCAGCCTGCATCGGGCAGATATCTAAG GCAAGCGAGGTTGGCGGCAGGTTCGGGTTGACATATTCGATTGTTAGCATTGCAACACTGATCTGTATCCCCATC GGCGGTGAGATGCTCGACAAAGTCGGGAAGAGAGCCATGGTGGCATATCTGGGAAGTGTTCTGATAGTGTCACTT GGTTTGTTCGTGATGGCCAGATGGGCCTGTCTGAGCTACCGGTGGAGGTGGCAGACAAAGATTTAA |
| Transcript | >Pro_DTO070G2_2|g8725.t1 ATGCAAAAGGCTGCCACCGCATCTGTGCAAAATCCAGTTCAAGAGCCATGGCAGTCGGCTGCGACAAGCGTTTCG GAATATCCCACTAGTTATCCCACTGGTCACAATGCAAACTTCGACGAAGAAGCTCCCCGGTCGGCATTTTCCATA GTCGAGCCGCCGGCCGAGCTATCCACACTCACAACTCATCTGACCGGTCATAGTACCGACGACAAATTCCCAGAT GGAGGGTTGCAAGCGTGGTGTGTTGTGGCAGGTTCATTCTTTCTCTTGATGAGTACATTCGGTGTGATGAACACG ACGGGAATCCTGCAGAATTACTTCGCTTCCCATCAGCTAGCCAGCTATTCGCCGAGTGCAGTCGGCTGGATTCCG GGGCTGTTCACCTTCTTCGGTCTGAGTGTTTCTGTACAGGTTGGGCCGATGTTTGATCGCTATGGACCCAGGGGC ATTCTTATAGCTGGCACTCTATGCTATGTGACTGGCCTTGTTCTTCTCGCCGAAAGCCATCTGTACTGGCATTTT GTTCTTACCCTTGGTGTTCTTTCTGGAACCGGTGCTGCCCTCTTGAGCACAGTGGCATTAGCTAGTGTGCCTCAA TGGTTCGATCGCAAGGCAGCCCTTGCGATTGGGATTTCGATGTCGGGCGCGGGTCTTGGTGGTGTGATATTTCCG TTTGTGCTAAGAGCCGGATTCACCAACCTTGGATATAAGTGGACAATTCGATTACTGGCATTGTTGGTACTGGTG ATGTCTGTCCTTGGAACAGCTCTGGTCAAGGCACGTCTTCCAAAGGGCAGAAGTAAATCAACTATCAACTTGCGT TCCTTGCAAGATGCGAGGTTTACCTGGTTGACAATGGGTATCTTTGCTCTTGAGCTCGAGGTTTTCGCTGGTCTA GGTCTTTATCCAACCTACGTGGTCATGCAGGGGTTTTCTACCAATACCAGTGTCGTTCTTCTGGCTGTTCTCAAC GTAGCATCCACGGCCGGACGACTGATGGCTGGGGGCGTGGCGGATCGGTTTGGCAGAATCAACACCCAGACTGCA CTCATTGCTCTGGGTGCATTCGCAGTGTTCGTGGTCTGGCTGCCGTTTGGAAATTCCCTAATTGGGCTTTATATC TTCTCGGTCATCTTCGGATTGGCTTCAGGATCATTCCTAAGTCTTGCACCAGCCTGCATCGGGCAGATATCTAAG GCAAGCGAGGTTGGCGGCAGGTTCGGGTTGACATATTCGATTGTTAGCATTGCAACACTGATCTGTATCCCCATC GGCGGTGAGATGCTCGACAAAGTCGGGAAGAGAGCCATGGTGGCATATCTGGGAAGTGTTCTGATAGTGTCACTT GGTTTGTTCGTGATGGCCAGATGGGCCTGTCTGAGCTACCGGTGGAGGTGGCAGACAAAGATTTAA |
| Gene | >Pro_DTO070G2_2|g8725.t1 ATGCAAAAGGCTGCCACCGCATCTGTGCAAAATCCAGTTCAAGAGCCATGGCAGTCGGCTGCGACAAGCGTTTCG GAATATCCCACTAGTTATCCCACTGGTCACAATGCAAACTTCGACGAAGAAGCTCCCCGGTCGGCATTTTCCATA GTCGAGCCGCCGGCCGAGCTATCCACACTCACAACTCATCTGACCGGTCATAGTACCGACGACAAATTCCCAGAT GGAGGGTTGCAAGCGTGGTGTGTTGTGGCAGGTTCATTCTTTCTCTTGATGAGTACATTCGGTGTGATGAACACG ACGGGAATCCTGCAGAATTACTTCGCTTCCCATCAGCTAGCCAGCTATTCGCCGAGTGCAGTCGGCTGGATTCCG GGGCTGTTCACCTTCTTCGGTCTGAGTGTTTCTGTACAGGTTGGGCCGATGTTTGATCGCTATGGACCCAGGGGC ATTCTTATAGCTGGCACTCTATGCTATGTGACTGGCCTTGTTCTTCTCGCCGAAAGCCATCTGTACTGGCATTTT GTTCTTACCCTTGGTGTTCTTTCTGGAACCGGTGCTGCCCTCTTGAGCACAGTGGCATTAGCTAGTGTGCCTCAA TGGTTCGATCGCAAGGCAGCCCTTGCGATTGGGATTTCGATGTCGGGCGCGGGTCTTGGTGGTGTGATATTTCCG TTTGTGCTAAGAGCCGGATTCACCAACCTTGGATATAAGTGGACAATTCGATTACTGGCATTGTTGGTACTGGTG ATGTCTGTCCTTGGAACAGCTCTGGTCAAGGCACGTCTTCCAAAGGGCAGAAGTAAATCAACTATCAACTTGCGT TCCTTGCAAGATGCGAGGTTTACCTGGTTGACAATGGGTATCTTTGGTGGGTCGCTTTCAATCGGGAATCCGGAT AATAGAAACAAGTACTGACTTGGGGTAGCTCTTGAGCTCGAGGTTTTCGCTGGTCTAGGTCTTTATCCAACCTAC GTGGTCATGCAGGGGTTTTCTACCAATACCAGTGTCGTTCTTCTGGCTGTTCTCAACGTGTGAGTGATAATGTAT GTTGGTGGTCTCTCGAGCGAAGCGCTGACTAGTGTGGCATAGAGCATCCACGGCCGGACGACTGATGGCTGGGGG CGTGGCGGATCGGTTTGGCAGAATCAACACCCAGACTGCACTCATTGCTCTGGGTGCATTCGCAGTGTTCGTGGT CTGGCTGCCGTTTGGAAATTCCCTAATTGGGCTTTATATCTTCTCGGTCATCTTCGGATTGGCTTCAGGATCATT CCTAAGTCTTGCACCAGCCTGCATCGGGCAGATATCTAAGGCAAGCGAGGTTGGCGGCAGGTTCGGGTTGACATA TTCGATTGTTAGCATTGCGTAAGTCTTTCAAATCCCGTCAGTAGTAGTAGTTCCTCGCTAATGGGAACTTAGAAC ACTGATCTGTATCCCCATCGGCGGTGAGATGCTCGACAAAGTCGGGAAGAGAGCCATGGTGGCATATCTGGGAAG TGTTCTGATAGTGTCACTTGGTTTGTTCGTGATGGCCAGATGGGCCTGTCTGAGCTACCGGTGGAGGTGGCAGAC AAAGATTTAA |