Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO070G2_2|g8683.t1
Gene name
Locationscaffold_20:172022..173811
Strand-
Gene length (bp)1789
Transcript length (bp)1470
Coding sequence length (bp)1470
Protein length (aa) 490

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00295 Glyco_hydro_28 Glycosyl hydrolases family 28 3.1E-30 136 397
PF12708 Pectate_lyase_3 Pectate lyase superfamily protein 7.5E-07 37 273

GO

GO Term Description Terminal node
GO:0005975 carbohydrate metabolic process Yes
GO:0004650 polygalacturonase activity Yes
GO:0071704 organic substance metabolic process No
GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds No
GO:0044238 primary metabolic process No
GO:0008152 metabolic process No
GO:0016798 hydrolase activity, acting on glycosyl bonds No
GO:0016787 hydrolase activity No
GO:0003824 catalytic activity No
GO:0003674 molecular_function No
GO:0008150 biological_process No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 18 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO070G2_2|g8683.t1
MKFTSLLLLPLLRITVGQLIGPVGPTTDLYDKTVECNILDYGAVADNKTDISTALETVFSECVRKHPGSRLIVPE
GEYLIERGVTLSNGTNWAFQLDGLITAAYGGDWNIARELILQGFAGTEIINATINGEGDSKFLLDVLVIVNAVDF
EFYSSNGKGAFQGQGYLYRNLNNTDRPRLVRLISPTNASVHDLILVDSPKFHIILDFAVNVEAYHLTIRGGNLGS
YDGIDAIGTNYWIHDNEVTNRDECVSVKSPSHHALVENLVCNQAGSGISIGSLNVSAEISNIEARNISIIQGNNI
AFIKTYPGGSGYVTNITFSNFRSLGSLYGLDINQYWQNTFEPDTGAVTLSNLVFRNFSGSVADGVKRPPLYLIAN
DLTYATNVTVEDFTVWTEQGTSVVNKISNIFGNGDDSYGSNNGIKSLGEGESPSPYTSTYTITASPTDWQAPTTP
TWAVPSTGYGTASPIPVYTPAPLWRPGGVDYDLHYWGSF*
Coding >Pro_DTO070G2_2|g8683.t1
ATGAAATTCACCAGTTTGCTTCTGCTACCCTTGTTGCGTATCACCGTTGGCCAACTCATCGGCCCCGTGGGTCCA
ACAACCGACCTTTATGATAAGACAGTCGAATGCAACATCCTTGATTATGGCGCTGTAGCTGATAACAAGACCGAC
ATATCCACTGCACTAGAGACAGTTTTCTCGGAATGTGTTCGCAAACATCCGGGTAGCCGATTAATTGTACCCGAA
GGAGAGTATTTGATCGAGCGAGGTGTGACTCTCAGCAATGGCACAAATTGGGCATTCCAGTTGGATGGTCTGATC
ACAGCTGCATATGGCGGCGACTGGAATATCGCGCGTGAGTTGATACTCCAAGGGTTTGCAGGCACAGAGATTATC
AATGCAACCATCAACGGGGAGGGTGATTCTAAATTTTTATTAGATGTGCTCGTCATTGTCAATGCTGTGGATTTC
GAGTTCTATTCTTCCAATGGCAAAGGTGCCTTTCAAGGACAGGGTTATCTCTACCGAAATCTCAACAACACGGAT
CGCCCGCGCTTGGTGCGTTTGATCTCTCCGACCAACGCCTCAGTGCATGACTTGATTCTAGTCGACAGCCCCAAG
TTTCACATTATCTTGGATTTTGCCGTGAATGTTGAAGCCTACCATTTAACCATCCGGGGAGGAAACCTGGGCAGT
TATGATGGAATTGATGCCATTGGAACAAACTATTGGATTCACGACAATGAGGTTACCAATCGGGACGAATGTGTT
TCCGTGAAAAGTCCTTCTCATCATGCTTTGGTTGAGAACCTGGTGTGCAATCAAGCAGGCTCTGGTATATCCATT
GGCAGTCTGAATGTATCTGCTGAAATATCCAACATCGAAGCACGCAATATCAGCATTATCCAAGGCAACAACATA
GCCTTCATCAAAACATATCCTGGTGGATCCGGCTACGTTACAAACATCACTTTTTCGAATTTCCGCTCTCTGGGG
AGTCTTTATGGCTTGGATATCAACCAATACTGGCAGAATACGTTTGAGCCCGACACCGGTGCTGTTACATTGAGT
AACCTGGTTTTCCGGAATTTCTCTGGCTCTGTTGCCGATGGAGTGAAGCGTCCTCCACTTTACCTCATCGCGAAT
GATCTCACATACGCTACTAATGTCACTGTCGAAGATTTCACCGTGTGGACAGAACAGGGTACTTCGGTTGTGAAC
AAGATCAGCAATATCTTTGGCAATGGGGATGATAGCTACGGGTCAAATAATGGTATCAAGTCTCTCGGTGAAGGA
GAATCGCCCTCACCTTATACCAGCACCTACACCATTACAGCATCTCCAACTGACTGGCAGGCCCCCACAACTCCT
ACGTGGGCTGTTCCTAGTACGGGTTATGGAACGGCATCTCCTATTCCGGTCTATACTCCAGCTCCTCTGTGGCGC
CCAGGTGGTGTGGATTATGATTTGCATTACTGGGGAAGCTTCTAG
Transcript >Pro_DTO070G2_2|g8683.t1
ATGAAATTCACCAGTTTGCTTCTGCTACCCTTGTTGCGTATCACCGTTGGCCAACTCATCGGCCCCGTGGGTCCA
ACAACCGACCTTTATGATAAGACAGTCGAATGCAACATCCTTGATTATGGCGCTGTAGCTGATAACAAGACCGAC
ATATCCACTGCACTAGAGACAGTTTTCTCGGAATGTGTTCGCAAACATCCGGGTAGCCGATTAATTGTACCCGAA
GGAGAGTATTTGATCGAGCGAGGTGTGACTCTCAGCAATGGCACAAATTGGGCATTCCAGTTGGATGGTCTGATC
ACAGCTGCATATGGCGGCGACTGGAATATCGCGCGTGAGTTGATACTCCAAGGGTTTGCAGGCACAGAGATTATC
AATGCAACCATCAACGGGGAGGGTGATTCTAAATTTTTATTAGATGTGCTCGTCATTGTCAATGCTGTGGATTTC
GAGTTCTATTCTTCCAATGGCAAAGGTGCCTTTCAAGGACAGGGTTATCTCTACCGAAATCTCAACAACACGGAT
CGCCCGCGCTTGGTGCGTTTGATCTCTCCGACCAACGCCTCAGTGCATGACTTGATTCTAGTCGACAGCCCCAAG
TTTCACATTATCTTGGATTTTGCCGTGAATGTTGAAGCCTACCATTTAACCATCCGGGGAGGAAACCTGGGCAGT
TATGATGGAATTGATGCCATTGGAACAAACTATTGGATTCACGACAATGAGGTTACCAATCGGGACGAATGTGTT
TCCGTGAAAAGTCCTTCTCATCATGCTTTGGTTGAGAACCTGGTGTGCAATCAAGCAGGCTCTGGTATATCCATT
GGCAGTCTGAATGTATCTGCTGAAATATCCAACATCGAAGCACGCAATATCAGCATTATCCAAGGCAACAACATA
GCCTTCATCAAAACATATCCTGGTGGATCCGGCTACGTTACAAACATCACTTTTTCGAATTTCCGCTCTCTGGGG
AGTCTTTATGGCTTGGATATCAACCAATACTGGCAGAATACGTTTGAGCCCGACACCGGTGCTGTTACATTGAGT
AACCTGGTTTTCCGGAATTTCTCTGGCTCTGTTGCCGATGGAGTGAAGCGTCCTCCACTTTACCTCATCGCGAAT
GATCTCACATACGCTACTAATGTCACTGTCGAAGATTTCACCGTGTGGACAGAACAGGGTACTTCGGTTGTGAAC
AAGATCAGCAATATCTTTGGCAATGGGGATGATAGCTACGGGTCAAATAATGGTATCAAGTCTCTCGGTGAAGGA
GAATCGCCCTCACCTTATACCAGCACCTACACCATTACAGCATCTCCAACTGACTGGCAGGCCCCCACAACTCCT
ACGTGGGCTGTTCCTAGTACGGGTTATGGAACGGCATCTCCTATTCCGGTCTATACTCCAGCTCCTCTGTGGCGC
CCAGGTGGTGTGGATTATGATTTGCATTACTGGGGAAGCTTCTAG
Gene >Pro_DTO070G2_2|g8683.t1
ATGAAATTCACCAGTTTGCTTCTGCTACCCTTGTTGCGTATCACCGTTGGCCAACTCATCGGCCCCGTGGGTCCA
ACAACCGACCTTTATGATAAGACAGTCGAATGCAACATCCTTGATTATGGCGCTGTAGCTGATAACAAGACCGAC
ATATCCACTGCACTAGAGACAGTTTTCTCGGAATGTGTTCGCAAACATCCGGGTAGCCGATTAATTGTACCCGAA
GGAGAGTATTTGATCGAGCGAGGTGTGACTCTCAGCAATGGCACAAATTGGGCATTCCAGTTGGATGGTCTGATC
ACAGCTGCATATGGCGGCGACTGGAATATCGCGCGTGAGTTGATACTCCAAGGGTTTGCAGGCACAGAGATTATC
AATGCAACCATCAACGGGGAGGGTGATTCTAAATTTTTATTAGATGTGCTCGTCATTGTCAATGGTGAGTTCACA
TCTCCAGACATCTTTGGAGCCCAATGTTGACAAAACAGCTGTGGATTTCGAGTTCTATTCTTCCAATGGCAAAGG
TGCCTTTCAAGGACAGGGTTATCTCTACCGAAATCTCAACAAGTAAGTTATAGACCATTTTATGAGATGTTGTGA
AGCTTATACATAAATTCCAGCACGGATCGCCCGCGCTTGGTGCGTTTGATCTCTCCGACCAACGCCTCAGTGCAT
GACTTGATTCTAGTCGACAGCCCCAAGTTTCACATTATCTTGGATTTTGCCGTGAATGTTGAAGCCTACCATTTA
ACCATCCGGGGAGGAAACCTGGGCAGTTATGATGGAATTGATGCCATTGGAACAAACTATTGGATTCACGACAAT
GAGGTATGCGTCTCAACCCCTGGTCTTCATCTTTCACCTGAACTAATGATCATTCTAGGTTACCAATCGGGACGA
ATGTGTTTCCGTGAAAAGTCCTTCTCATCATGCTTTGGTTGAGAACCTGGTGTGCAATCAAGCAGGCTCTGGTAT
ATCCATTGGCAGTCTGAATGTATCTGCTGAAATATCCAACATCGTCAGTTTCAACCTGTCGATATCCCATCAAAT
GCTAATATTGCAGTAGGAAGCACGCAATATCAGCATTATCCAAGGCAACAACATAGCCTTCATCAAAACATATCC
TGGTGGATCCGGCTACGTTACAAACATCACTTTTTCGAATTTCCGCTCTCTGGGGAGTCTTTATGGCTTGGATAT
CAACCAATACTGGCAGAATACGTTTGAGCCCGACACCGGTGCTGTTACATTGAGTAACCTGGTTTTCCGGAATTT
CTCTGGTAAGTCATTGACAAATGTTAGTTCTGGCAGTATTCTTACAAAGTTTGTCAGGCTCTGTTGCCGATGGAG
TGAAGCGTCCTCCACTTTACCTCATCGCGAATGATCTCACATACGCTACTAATGTCACTGTCGAAGATTTCACCG
TGTGGACAGAACAGGGTACTTCGGTTGTGAACAAGATCAGCAATATCTTTGGCAATGGGGATGATAGCTACGGGT
CAAATAATGGTATCAAGTCTCTCGGTGAAGGAGAATCGCCCTCACCTTATACCAGCACCTACACCATTACAGCAT
CTCCAACTGACTGGCAGGCCCCCACAACTCCTACGTGGGCTGTTCCTAGTACGGGTTATGGAAGTAAGCTCTCTC
TCGGCTTCTTTTGTGTTTCTTGTCCTACCAGATAACTAATTTCTCTACAGCGGCATCTCCTATTCCGGTCTATAC
TCCAGCTCCTCTGTGGCGCCCAGGTGGTGTGGATTATGATTTGCATTACTGGGGAAGCTTCTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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