Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO070G2_2|g8680.t1
Gene name
Locationscaffold_20:166423..166865
Strand+
Gene length (bp)442
Transcript length (bp)273
Coding sequence length (bp)273
Protein length (aa) 91

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF05730 CFEM CFEM domain 1.0E-07 22 85

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 19 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO070G2_2|g8680.t1
MKLTIFFPLAAFLSWTVADPLDDASPCLIRCLNEASAVAGCLSSIDYKCTCPSPAFKDTLGTCLKVSCTAADLTV
AGELHKKRCGGSPPQ*
Coding >Pro_DTO070G2_2|g8680.t1
ATGAAGCTCACTATTTTCTTCCCGCTGGCTGCGTTCCTGTCATGGACCGTCGCTGATCCTCTGGATGATGCCAGT
CCCTGCCTTATTCGTTGTCTCAACGAAGCCTCTGCAGTAGCAGGCTGTCTCTCCTCTATTGACTACAAGTGCACT
TGCCCAAGCCCAGCGTTCAAGGATACGCTCGGTACCTGTTTGAAGGTTTCTTGTACTGCGGCAGACTTGACAGTT
GCTGGAGAATTGCACAAGAAACGTTGTGGTGGGTCGCCGCCTCAGTAA
Transcript >Pro_DTO070G2_2|g8680.t1
ATGAAGCTCACTATTTTCTTCCCGCTGGCTGCGTTCCTGTCATGGACCGTCGCTGATCCTCTGGATGATGCCAGT
CCCTGCCTTATTCGTTGTCTCAACGAAGCCTCTGCAGTAGCAGGCTGTCTCTCCTCTATTGACTACAAGTGCACT
TGCCCAAGCCCAGCGTTCAAGGATACGCTCGGTACCTGTTTGAAGGTTTCTTGTACTGCGGCAGACTTGACAGTT
GCTGGAGAATTGCACAAGAAACGTTGTGGTGGGTCGCCGCCTCAGTAA
Gene >Pro_DTO070G2_2|g8680.t1
ATGAAGCTCACTATTTTCTTCCCGCTGGCTGCGTTCCTGTCATGGACCGTCGCTGATCCTCTGGATGATGCCAGT
CCCTGCCTTGTATGTCTCTTACCAGGATGTATGACTTGACTCAGAAGACTGACCACCTTTTCGTATTTCAAACAG
ATTCGTTGTCTCAACGAAGCCTCTGCAGTAGCAGGCTGTCTCTCCTCTATTGACTACAAGTGCACTTGCCCAAGC
CCAGCGTTCAAGGATACGCTCGGTACCTGTTTGAAGGTTTCTTGTACTGCGGCAGACTTGACAGGTATATTCTCC
TCACACATTGCGCTTTTGCTTCTATTGGTTTTCCAATCGGTCTCTGTGAGATTATAATTGTTTGAAGACTTGGGC
TAATTGTTTCCCTTTAGTTGCTGGAGAATTGCACAAGAAACGTTGTGGTGGGTCGCCGCCTCAGTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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