© 2022 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | Pro_DTO070G2_2|g8640.t1 |
| Gene name | |
| Location | scaffold_20:54920..56047 |
| Strand | - |
| Gene length (bp) | 1127 |
| Transcript length (bp) | 897 |
| Coding sequence length (bp) | 897 |
| Protein length (aa) | 299 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| Yes | 1 - 22 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 4 | 21 | 17 |
| 2 | 84 | 106 | 22 |
| 3 | 137 | 159 | 22 |
| 4 | 168 | 187 | 19 |
| 5 | 202 | 224 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Pro_DTO070G2_2|g8640.t1 MGAILCAVIRLALVHVILIWGTNNMSGTFRRTHVFTPEDIRRREIASKFVLTNRVFYNSYLWLQKLVLLDTYRRL LRQLRWEKVTMISYIGIFAATYVTVQTVTFTECDPFSHYWIVLPDPGKCCQAQLQLIVLVSSGVLNVITDIMLIA LPIPILVLVKRSAVEKIQLAVLFAVGLFIVAITIVRLPQNVKNPTVQVNRTTWASVELLAAAIVANAPVLYGLLK GRSQRSKYAASGAGSTGPSWQGLQKRSANELELELQRISHSVGGPVLGSKISSSHYLEIDGGSSQSLTRSLDK* |
| Coding | >Pro_DTO070G2_2|g8640.t1 ATGGGAGCGATTCTCTGTGCTGTCATACGCCTCGCCTTGGTTCATGTTATTCTCATCTGGGGAACCAACAATATG TCTGGCACATTCAGACGCACGCACGTTTTTACCCCCGAGGACATTCGTCGTAGAGAGATCGCGAGCAAATTCGTG CTCACCAATCGAGTGTTCTATAATTCATATCTCTGGTTGCAAAAGTTGGTTCTGCTTGATACCTATCGCAGACTG CTCAGGCAACTTCGCTGGGAGAAGGTCACGATGATCTCCTATATTGGTATATTCGCAGCGACGTATGTAACCGTA CAGACTGTGACTTTCACGGAGTGTGATCCATTCAGTCATTACTGGATCGTATTACCGGATCCTGGCAAATGCTGC CAGGCACAGCTCCAATTGATCGTCCTCGTTTCCTCAGGTGTATTGAATGTCATCACCGATATTATGCTTATCGCC TTGCCGATTCCAATCCTGGTTCTGGTTAAACGATCCGCTGTTGAAAAAATCCAGCTAGCGGTCCTCTTCGCCGTC GGTCTCTTCATCGTCGCAATCACCATCGTTAGACTACCTCAAAACGTCAAAAATCCCACTGTACAAGTGAACAGA ACGACTTGGGCATCCGTCGAGTTGCTCGCTGCCGCTATCGTAGCCAACGCTCCGGTTCTGTACGGACTTCTGAAG GGACGGAGCCAAAGGTCCAAGTACGCCGCATCAGGAGCCGGATCAACTGGGCCGTCGTGGCAGGGACTTCAAAAG AGGTCGGCAAACGAGCTCGAATTAGAACTGCAACGGATCAGTCACAGTGTGGGAGGGCCTGTTCTCGGTTCAAAG ATATCATCCAGCCATTATTTGGAGATCGATGGCGGGAGTAGTCAGTCGTTGACTCGAAGCCTAGATAAGTAG |
| Transcript | >Pro_DTO070G2_2|g8640.t1 ATGGGAGCGATTCTCTGTGCTGTCATACGCCTCGCCTTGGTTCATGTTATTCTCATCTGGGGAACCAACAATATG TCTGGCACATTCAGACGCACGCACGTTTTTACCCCCGAGGACATTCGTCGTAGAGAGATCGCGAGCAAATTCGTG CTCACCAATCGAGTGTTCTATAATTCATATCTCTGGTTGCAAAAGTTGGTTCTGCTTGATACCTATCGCAGACTG CTCAGGCAACTTCGCTGGGAGAAGGTCACGATGATCTCCTATATTGGTATATTCGCAGCGACGTATGTAACCGTA CAGACTGTGACTTTCACGGAGTGTGATCCATTCAGTCATTACTGGATCGTATTACCGGATCCTGGCAAATGCTGC CAGGCACAGCTCCAATTGATCGTCCTCGTTTCCTCAGGTGTATTGAATGTCATCACCGATATTATGCTTATCGCC TTGCCGATTCCAATCCTGGTTCTGGTTAAACGATCCGCTGTTGAAAAAATCCAGCTAGCGGTCCTCTTCGCCGTC GGTCTCTTCATCGTCGCAATCACCATCGTTAGACTACCTCAAAACGTCAAAAATCCCACTGTACAAGTGAACAGA ACGACTTGGGCATCCGTCGAGTTGCTCGCTGCCGCTATCGTAGCCAACGCTCCGGTTCTGTACGGACTTCTGAAG GGACGGAGCCAAAGGTCCAAGTACGCCGCATCAGGAGCCGGATCAACTGGGCCGTCGTGGCAGGGACTTCAAAAG AGGTCGGCAAACGAGCTCGAATTAGAACTGCAACGGATCAGTCACAGTGTGGGAGGGCCTGTTCTCGGTTCAAAG ATATCATCCAGCCATTATTTGGAGATCGATGGCGGGAGTAGTCAGTCGTTGACTCGAAGCCTAGATAAGTAG |
| Gene | >Pro_DTO070G2_2|g8640.t1 ATGGGAGCGATTCTCTGTGCTGTCATACGCCTCGCCTTGGTTCATGTTATTCTCATCTGGGGAACCAACAATATG TCTGGCACATTCAGACGCACGCACGTTTTTACCCCCGAGGACATTCGTCGTAGAGAGATCGCGAGCAAATTCGTG CTCACCAATCGAGTGTTCTATAATTCATAGTACGTGCGTTAAACGGAATCCAAGGTCGGCTATTTCTCTTTCTCA TATTTCTTTTAGTCTCTGGTTGCAAAAGTTGGTTCTGCTTGATACCTATCGCAGACTGCTCAGGCAACTTCGCTG GGAGAAGGTCACGATGATCTCCTATATTGGTATATTCGCAGCGACGTATGTAACCGTACAGACTGTGACTTTCAC GGAGTGTGATCCATTCAGTCATTACTGGATCGTATTACCGGATCCTGGTATTTCTTTCCCTCTTCTAATTTCTCT CTTATTTTCGTGTTTCGTTGAACCTTCTAACCAATACAGGCAAATGCTGCCAGGCACAGCTCCAATTGATCGTCC TCGGTATGCTTCCAGTCGGAAAGATCGGTTCAATGTAATACCTCTAACATTCTAGTTTCCTCAGGTGTATTGAAT GTCATCACCGATATTATGCTTATCGCCTTGCCGATTCCAATCCTGGTTCTGGTTAAACGATCCGCTGTTGAGTAA GTCTACCCATATCACCATATGAATTTCGTTGACGAGCTCTCTCCGCTAGAAAAATCCAGCTAGCGGTCCTCTTCG CCGTCGGTCTCTTCATCGTCGCAATCACCATCGTTAGACTACCTCAAAACGTCAAAAATCCCACTGTACAAGTGA ACAGAACGACTTGGGCATCCGTCGAGTTGCTCGCTGCCGCTATCGTAGCCAACGCTCCGGTTCTGTACGGACTTC TGAAGGGACGGAGCCAAAGGTCCAAGTACGCCGCATCAGGAGCCGGATCAACTGGGCCGTCGTGGCAGGGACTTC AAAAGAGGTCGGCAAACGAGCTCGAATTAGAACTGCAACGGATCAGTCACAGTGTGGGAGGGCCTGTTCTCGGTT CAAAGATATCATCCAGCCATTATTTGGAGATCGATGGCGGGAGTAGTCAGTCGTTGACTCGAAGCCTAGATAAGT AG |