Protein ID | Pro_DTO070G2_2|g8577.t1 |
Gene name | |
Location | scaffold_19:301437..303329 |
Strand | + |
Gene length (bp) | 1892 |
Transcript length (bp) | 1725 |
Coding sequence length (bp) | 1725 |
Protein length (aa) | 575 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF12735 | Trs65 | TRAPP trafficking subunit Trs65 | 2.0E-101 | 274 | 566 |
GO Term | Description | Terminal node |
---|---|---|
GO:0006891 | intra-Golgi vesicle-mediated transport | Yes |
GO:1990071 | TRAPPII protein complex | Yes |
GO:0016192 | vesicle-mediated transport | No |
GO:0006810 | transport | No |
GO:0099023 | vesicle tethering complex | No |
GO:0048193 | Golgi vesicle transport | No |
GO:0030008 | TRAPP complex | No |
GO:0005575 | cellular_component | No |
GO:0051179 | localization | No |
GO:0140535 | intracellular protein-containing complex | No |
GO:0032991 | protein-containing complex | No |
GO:0051234 | establishment of localization | No |
GO:0008150 | biological_process | No |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 11 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Pro_DTO070G2_2|g8577.t1 MPGLEIPGEFLRHAILDTVVLHAPAFDIERALSSALEDGADDLPSVLSSIPQRSLLFFDEFLPVRIILRLSDCSE TTLKHYLPRLEVKLDVFAVDPAESVGENLTPTRDIIFSGIVGRDEDPLVVFNEFEGDEGSGNHVYLVWNIETILR RPRIRIQHPSLLFIASASLNPADARRRENSGDDYLPSLVPASTNMLQSLSTDKSFNHKEPFLPASRLLRVVPTTY DEDPIYNIQQQHGHPFRVVPAASARIRYSRLSSYTAIPMTVASLDFEVTPYLACEVSFDKANLHLSEGTIESLSD TPGLALPITCRPRDDVTLMYKLTPEYGPETNPSSTALVSTLDISLEAAILVDDDCKPRISMQWRTNVDFSVALNP NFGGPSPALQRTNRPTSLSVSTQVGVNPHRSSLRERAYSVTDVGITISFSGPVRVQVGCVFSWDVFIVNRSNAPR KFALIAIPKRKSVDPRGHVARPSSSSITSRKEDQVAEAVTDDNIVHARQKSVAGQEVELISLSTDIRVGPLLPGT CHSTELKLLPLATGPLHLEAVRLVDVNTNETTDIRDLPDILADDQPRSS* |
Coding | >Pro_DTO070G2_2|g8577.t1 ATGCCTGGTCTGGAGATCCCAGGTGAATTCTTGCGTCATGCAATTCTTGATACCGTCGTGCTTCATGCTCCAGCA TTTGACATTGAGCGCGCCCTGAGTTCGGCCCTAGAGGACGGAGCTGATGATCTCCCCTCTGTTCTCTCGTCAATC CCCCAACGGTCTCTATTGTTCTTTGATGAATTTTTGCCTGTCCGTATCATCTTGAGACTATCTGATTGCTCAGAA ACGACCTTGAAACACTACCTGCCACGACTCGAAGTCAAGCTCGATGTCTTTGCTGTCGATCCAGCAGAATCAGTT GGCGAAAACCTCACGCCAACTCGCGATATAATATTCTCAGGAATTGTCGGTCGAGATGAGGATCCCCTAGTAGTC TTCAATGAATTCGAAGGTGATGAAGGCAGTGGGAATCATGTCTATTTGGTTTGGAACATCGAGACTATACTGCGG CGTCCCCGTATTCGAATCCAACATCCGTCACTCTTATTCATTGCGTCTGCCAGTCTGAATCCGGCTGACGCTCGC CGTCGAGAGAATTCGGGGGATGACTATCTCCCCTCACTCGTCCCCGCATCGACCAATATGCTGCAATCTCTATCC ACTGATAAATCTTTCAATCATAAAGAGCCTTTCCTCCCCGCTTCCAGACTATTGAGGGTTGTACCGACAACATAC GACGAAGACCCGATTTACAATATCCAGCAACAACACGGTCACCCCTTTCGCGTTGTGCCAGCCGCAAGCGCAAGG ATTCGATACTCTCGGTTAAGCTCCTACACGGCTATACCGATGACCGTGGCCAGTCTTGACTTTGAGGTCACCCCT TATCTGGCTTGCGAGGTCTCCTTTGACAAAGCGAATCTTCACCTGTCCGAGGGAACGATTGAGTCGCTTTCAGAC ACACCGGGCCTGGCTCTTCCTATTACTTGCCGTCCGCGAGACGATGTGACCCTCATGTATAAACTTACACCGGAG TATGGCCCAGAGACCAATCCATCATCTACCGCGTTAGTCAGCACGCTGGACATATCTCTCGAGGCAGCAATTCTT GTGGATGACGACTGCAAGCCACGTATTTCTATGCAGTGGAGAACCAACGTCGATTTCTCAGTCGCCCTAAATCCG AATTTTGGGGGGCCCAGTCCAGCGCTGCAAAGGACCAACCGCCCTACCAGTCTATCGGTGTCAACCCAAGTGGGT GTGAACCCTCATCGAAGCTCATTGCGAGAACGAGCATATTCGGTCACCGACGTGGGTATCACAATCTCATTCTCT GGACCTGTTCGTGTGCAAGTGGGCTGTGTCTTCTCTTGGGATGTTTTTATTGTCAATCGATCAAACGCTCCTCGA AAGTTTGCCTTGATCGCCATACCCAAGCGGAAAAGCGTGGACCCACGAGGCCATGTTGCTCGGCCTTCATCGTCA TCTATCACCAGCCGGAAAGAGGACCAAGTGGCCGAGGCGGTAACTGACGATAATATCGTGCATGCGAGGCAAAAG AGTGTGGCTGGTCAGGAAGTGGAACTGATCAGCTTGAGCACAGACATTCGCGTGGGCCCCCTCCTCCCAGGAACT TGCCATTCGACTGAACTCAAACTCCTTCCCCTAGCTACAGGCCCACTTCATTTGGAGGCGGTCCGGCTTGTAGAT GTGAACACGAACGAAACGACTGATATCCGAGATCTTCCGGACATTTTGGCGGATGATCAGCCTCGCTCTAGTTAA |
Transcript | >Pro_DTO070G2_2|g8577.t1 ATGCCTGGTCTGGAGATCCCAGGTGAATTCTTGCGTCATGCAATTCTTGATACCGTCGTGCTTCATGCTCCAGCA TTTGACATTGAGCGCGCCCTGAGTTCGGCCCTAGAGGACGGAGCTGATGATCTCCCCTCTGTTCTCTCGTCAATC CCCCAACGGTCTCTATTGTTCTTTGATGAATTTTTGCCTGTCCGTATCATCTTGAGACTATCTGATTGCTCAGAA ACGACCTTGAAACACTACCTGCCACGACTCGAAGTCAAGCTCGATGTCTTTGCTGTCGATCCAGCAGAATCAGTT GGCGAAAACCTCACGCCAACTCGCGATATAATATTCTCAGGAATTGTCGGTCGAGATGAGGATCCCCTAGTAGTC TTCAATGAATTCGAAGGTGATGAAGGCAGTGGGAATCATGTCTATTTGGTTTGGAACATCGAGACTATACTGCGG CGTCCCCGTATTCGAATCCAACATCCGTCACTCTTATTCATTGCGTCTGCCAGTCTGAATCCGGCTGACGCTCGC CGTCGAGAGAATTCGGGGGATGACTATCTCCCCTCACTCGTCCCCGCATCGACCAATATGCTGCAATCTCTATCC ACTGATAAATCTTTCAATCATAAAGAGCCTTTCCTCCCCGCTTCCAGACTATTGAGGGTTGTACCGACAACATAC GACGAAGACCCGATTTACAATATCCAGCAACAACACGGTCACCCCTTTCGCGTTGTGCCAGCCGCAAGCGCAAGG ATTCGATACTCTCGGTTAAGCTCCTACACGGCTATACCGATGACCGTGGCCAGTCTTGACTTTGAGGTCACCCCT TATCTGGCTTGCGAGGTCTCCTTTGACAAAGCGAATCTTCACCTGTCCGAGGGAACGATTGAGTCGCTTTCAGAC ACACCGGGCCTGGCTCTTCCTATTACTTGCCGTCCGCGAGACGATGTGACCCTCATGTATAAACTTACACCGGAG TATGGCCCAGAGACCAATCCATCATCTACCGCGTTAGTCAGCACGCTGGACATATCTCTCGAGGCAGCAATTCTT GTGGATGACGACTGCAAGCCACGTATTTCTATGCAGTGGAGAACCAACGTCGATTTCTCAGTCGCCCTAAATCCG AATTTTGGGGGGCCCAGTCCAGCGCTGCAAAGGACCAACCGCCCTACCAGTCTATCGGTGTCAACCCAAGTGGGT GTGAACCCTCATCGAAGCTCATTGCGAGAACGAGCATATTCGGTCACCGACGTGGGTATCACAATCTCATTCTCT GGACCTGTTCGTGTGCAAGTGGGCTGTGTCTTCTCTTGGGATGTTTTTATTGTCAATCGATCAAACGCTCCTCGA AAGTTTGCCTTGATCGCCATACCCAAGCGGAAAAGCGTGGACCCACGAGGCCATGTTGCTCGGCCTTCATCGTCA TCTATCACCAGCCGGAAAGAGGACCAAGTGGCCGAGGCGGTAACTGACGATAATATCGTGCATGCGAGGCAAAAG AGTGTGGCTGGTCAGGAAGTGGAACTGATCAGCTTGAGCACAGACATTCGCGTGGGCCCCCTCCTCCCAGGAACT TGCCATTCGACTGAACTCAAACTCCTTCCCCTAGCTACAGGCCCACTTCATTTGGAGGCGGTCCGGCTTGTAGAT GTGAACACGAACGAAACGACTGATATCCGAGATCTTCCGGACATTTTGGCGGATGATCAGCCTCGCTCTAGTTAA |
Gene | >Pro_DTO070G2_2|g8577.t1 ATGCCTGGTCTGGAGATCCCAGGTGAATTCTTGCGTCATGCAATTCTTGATACCGTCGTGCTTCATGCTCCAGCA TTTGACATTGAGCGCGCCCTGAGTTCGGCCCTAGAGGACGGAGCTGATGATCTCCCCTCTGTTCTCTCGTCAATC CCCCAACGGTCTCTATTGTTCTTTGGTATGCACTTTCAAAGGATCAGCAGAGTTTGCGCCTTACTCATTAATAGC AATTAGATGAATTTTTGCCTGTCCGTATCATCTTGAGACTATCTGATTGCTCAGAAACGACCTTGAAACACTACC TGCCACGACTCGAAGTCAAGCTCGATGTCTTTGCTGTCGATCCAGCAGAATCAGTTGGCGAAAACCTCACGCCAA CTCGCGATATAATATTCTCAGGAATTGTCGGTCGAGATGAGGATCCCCTAGTAGTCTTCAATGAATTCGAAGGTG ATGAAGGCAGTGGGAATCATGTCTATTTGGTTTGGAACATCGAGACTATACTGCGTGAGTGATTTGAATCTTTGG ATTGACATGAACGTCACTAACTTGGTTGATAGGGCGTCCCCGTATTCGAATCCAACATCCGTCACTCTTATTCAT TGCGTCTGCCAGTCTGAATCCGGCTGACGCTCGCCGTCGAGAGAATTCGGGGGATGACTATCTCCCCTCACTCGT CCCCGCATCGACCAATATGCTGCAATCTCTATCCACTGATAAATCTTTCAATCATAAAGAGCCTTTCCTCCCCGC TTCCAGACTATTGAGGGTTGTACCGACAACATACGACGAAGACCCGATTTACAATATCCAGCAACAACACGGTCA CCCCTTTCGCGTTGTGCCAGCCGCAAGCGCAAGGATTCGATACTCTCGGTTAAGCTCCTACACGGCTATACCGAT GACCGTGGCCAGTCTTGACTTTGAGGTCACCCCTTATCTGGCTTGCGAGGTCTCCTTTGACAAAGCGAATCTTCA CCTGTCCGAGGGAACGATTGAGTCGCTTTCAGACACACCGGGCCTGGCTCTTCCTATTACTTGCCGTCCGCGAGA CGATGTGACCCTCATGTATAAACTTACACCGGAGTATGGCCCAGAGACCAATCCATCATCTACCGCGTTAGTCAG CACGCTGGACATATCTCTCGAGGCAGCAATTCTTGTGGATGACGACTGCAAGCCACGTATTTCTATGCAGTGGAG AACCAACGTCGATTTCTCAGTCGCCCTAAATCCGAATTTTGGGGGGCCCAGTCCAGCGCTGCAAAGGACCAACCG CCCTACCAGTCTATCGGTGTCAACCCAAGTGGGTGTGAACCCTCATCGAAGCTCATTGCGAGAACGAGCATATTC GGTCACCGACGTGGGTATCACAATCTCATTCTCTGGACCTGTTCGTGTGCAAGTGGGCTGTGTCTTCTCTTGGGA TGTTTTTATTGTCAATCGATCAAACGCTCCTCGAAAGTTTGCCTTGATCGCCATACCCAAGCGGAAAAGCGTGGA CCCACGAGGCCATGTTGCTCGGCCTTCATCGTCATCTATCACCAGCCGGAAAGAGGACCAAGTGGCCGAGGCGGT AACTGACGATAATATCGTGCATGCGAGGCAAAAGAGTGTGGCTGGTCAGGAAGTGGAACTGATCAGCTTGAGCAC AGACATTCGCGTGGGGTGAGTATTCTCTACTGTGTTCCTTTTCGTTTCCTTCTCTAAGCTGACGTTTTATTAGCC CCCTCCTCCCAGGAACTTGCCATTCGACTGAACTCAAACTCCTTCCCCTAGCTACAGGCCCACTTCATTTGGAGG CGGTCCGGCTTGTAGATGTGAACACGAACGAAACGACTGATATCCGAGATCTTCCGGACATTTTGGCGGATGATC AGCCTCGCTCTAGTTAA |