© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Pro_DTO070G2_2|g8294.t1 |
| Gene name | |
| Location | scaffold_17:387052..387904 |
| Strand | + |
| Gene length (bp) | 852 |
| Transcript length (bp) | 852 |
| Coding sequence length (bp) | 852 |
| Protein length (aa) | 284 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF13883 | Pyrid_oxidase_2 | Pyridoxamine 5'-phosphate oxidase | 3.4E-33 | 67 | 255 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| Yes | 1 - 24 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 5 | 27 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Pro_DTO070G2_2|g8294.t1 MVSHLASILTGALALLLPLTAHGFVVPLPDNLQAFLGRLDTSTPSPNINHIEDESALNRPSWFTSTLMARRLLAL SPSGVISTNFPESLPPSAHAPSDVAGLSIGLREYIADCDGSLPSDFSHDDRGDPTILGLRIGTTFKNIAAGSNLS LQLDWWDHLNEAGPVYPGLPLSPAALPRVTLFGYLENLPSPLPDDAAAALEKCFLEPHPDAKVWLPGASYSPHAS FWARLVVTHAYWIGGFGDVQQIGWINLTEWQGVRPHGSVEGVGDGRGWQDVRLPGEKQ* |
| Coding | >Pro_DTO070G2_2|g8294.t1 ATGGTCTCTCATTTGGCCTCCATCCTCACTGGCGCTCTTGCGCTGCTTTTACCCCTCACGGCTCACGGCTTTGTT GTCCCACTTCCAGACAATCTCCAAGCCTTTCTCGGACGACTAGATACTTCGACACCCAGCCCGAACATTAACCAT ATTGAAGATGAAAGTGCCTTGAATCGACCGTCATGGTTCACTTCGACTTTGATGGCTCGTCGGCTGCTTGCGCTG TCACCCTCTGGCGTCATCTCCACCAACTTCCCAGAGTCCCTCCCACCCTCCGCACATGCCCCATCAGATGTTGCC GGTCTGTCTATCGGACTACGCGAGTACATTGCCGATTGTGATGGATCCCTGCCATCGGATTTCTCTCACGATGAT CGCGGTGATCCAACAATTCTTGGCCTTCGCATTGGAACCACTTTTAAGAACATTGCAGCGGGATCTAATCTCAGT CTCCAGTTAGACTGGTGGGATCATCTAAATGAGGCCGGTCCAGTCTACCCTGGTCTTCCTCTAAGCCCGGCTGCT CTTCCCCGTGTCACCCTCTTCGGTTACTTGGAGAACCTTCCATCCCCGCTTCCCGATGACGCAGCTGCGGCCCTC GAGAAGTGTTTCCTCGAGCCTCATCCCGATGCGAAGGTCTGGCTACCTGGTGCTTCTTATTCGCCACATGCGAGT TTCTGGGCCCGGTTGGTGGTCACCCATGCTTACTGGATTGGTGGATTTGGCGATGTACAGCAGATTGGGTGGATC AACCTCACGGAGTGGCAAGGGGTCCGACCACACGGCAGTGTAGAGGGCGTTGGTGATGGAAGAGGGTGGCAGGAT GTCCGGTTGCCGGGTGAGAAACAGTAA |
| Transcript | >Pro_DTO070G2_2|g8294.t1 ATGGTCTCTCATTTGGCCTCCATCCTCACTGGCGCTCTTGCGCTGCTTTTACCCCTCACGGCTCACGGCTTTGTT GTCCCACTTCCAGACAATCTCCAAGCCTTTCTCGGACGACTAGATACTTCGACACCCAGCCCGAACATTAACCAT ATTGAAGATGAAAGTGCCTTGAATCGACCGTCATGGTTCACTTCGACTTTGATGGCTCGTCGGCTGCTTGCGCTG TCACCCTCTGGCGTCATCTCCACCAACTTCCCAGAGTCCCTCCCACCCTCCGCACATGCCCCATCAGATGTTGCC GGTCTGTCTATCGGACTACGCGAGTACATTGCCGATTGTGATGGATCCCTGCCATCGGATTTCTCTCACGATGAT CGCGGTGATCCAACAATTCTTGGCCTTCGCATTGGAACCACTTTTAAGAACATTGCAGCGGGATCTAATCTCAGT CTCCAGTTAGACTGGTGGGATCATCTAAATGAGGCCGGTCCAGTCTACCCTGGTCTTCCTCTAAGCCCGGCTGCT CTTCCCCGTGTCACCCTCTTCGGTTACTTGGAGAACCTTCCATCCCCGCTTCCCGATGACGCAGCTGCGGCCCTC GAGAAGTGTTTCCTCGAGCCTCATCCCGATGCGAAGGTCTGGCTACCTGGTGCTTCTTATTCGCCACATGCGAGT TTCTGGGCCCGGTTGGTGGTCACCCATGCTTACTGGATTGGTGGATTTGGCGATGTACAGCAGATTGGGTGGATC AACCTCACGGAGTGGCAAGGGGTCCGACCACACGGCAGTGTAGAGGGCGTTGGTGATGGAAGAGGGTGGCAGGAT GTCCGGTTGCCGGGTGAGAAACAGTAA |
| Gene | >Pro_DTO070G2_2|g8294.t1 ATGGTCTCTCATTTGGCCTCCATCCTCACTGGCGCTCTTGCGCTGCTTTTACCCCTCACGGCTCACGGCTTTGTT GTCCCACTTCCAGACAATCTCCAAGCCTTTCTCGGACGACTAGATACTTCGACACCCAGCCCGAACATTAACCAT ATTGAAGATGAAAGTGCCTTGAATCGACCGTCATGGTTCACTTCGACTTTGATGGCTCGTCGGCTGCTTGCGCTG TCACCCTCTGGCGTCATCTCCACCAACTTCCCAGAGTCCCTCCCACCCTCCGCACATGCCCCATCAGATGTTGCC GGTCTGTCTATCGGACTACGCGAGTACATTGCCGATTGTGATGGATCCCTGCCATCGGATTTCTCTCACGATGAT CGCGGTGATCCAACAATTCTTGGCCTTCGCATTGGAACCACTTTTAAGAACATTGCAGCGGGATCTAATCTCAGT CTCCAGTTAGACTGGTGGGATCATCTAAATGAGGCCGGTCCAGTCTACCCTGGTCTTCCTCTAAGCCCGGCTGCT CTTCCCCGTGTCACCCTCTTCGGTTACTTGGAGAACCTTCCATCCCCGCTTCCCGATGACGCAGCTGCGGCCCTC GAGAAGTGTTTCCTCGAGCCTCATCCCGATGCGAAGGTCTGGCTACCTGGTGCTTCTTATTCGCCACATGCGAGT TTCTGGGCCCGGTTGGTGGTCACCCATGCTTACTGGATTGGTGGATTTGGCGATGTACAGCAGATTGGGTGGATC AACCTCACGGAGTGGCAAGGGGTCCGACCACACGGCAGTGTAGAGGGCGTTGGTGATGGAAGAGGGTGGCAGGAT GTCCGGTTGCCGGGTGAGAAACAGTAA |