Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO070G2_2|g8253.t1
Gene name
Locationscaffold_17:269057..270279
Strand-
Gene length (bp)1222
Transcript length (bp)975
Coding sequence length (bp)975
Protein length (aa) 325

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00544 Pectate_lyase_4 Pectate lyase 1.8E-41 88 261

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 22 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO070G2_2|g8253.t1
MAPFNLMAVSLLGCLSSLALGAPTATSNLGKRASVNDVAPGYASQNGGTKGGAGGTTTTVSSYAAFTAAVSGDSA
KVVVVSGPITQVAKQVRVGSNTSILGKDSTAVLTSFGLLVKEESNVIIRNLGVKKVLAANGDAIGVQKSTNVWID
HCDVSSDLDHDKDYYDGLIDLTHAADFITVSNTFVHDHWKASLIGHSDSNSAEDTGHLRVSLNNNYWYNLNSRGP
SFRFGTGHIYNNYYLDVADGINTRDGAQLLVESNTFVDSKKPLYSTDSGYAVANGNDFGDGENTAAAGTLKSVPY
SYSLLGSSKVKAAVVGTAGQTLTF*
Coding >Pro_DTO070G2_2|g8253.t1
ATGGCCCCTTTCAACTTGATGGCAGTTTCTCTGCTCGGCTGCTTGTCCAGCCTTGCACTGGGAGCTCCTACTGCA
ACCAGCAATCTGGGAAAGCGCGCAAGTGTCAATGATGTCGCTCCCGGCTATGCCAGCCAGAACGGAGGTACTAAG
GGTGGTGCTGGTGGCACTACTACCACTGTCTCGTCGTATGCTGCCTTCACAGCCGCAGTTTCGGGCGACTCTGCC
AAGGTTGTCGTTGTGAGCGGCCCCATCACGCAGGTAGCCAAACAAGTTCGTGTTGGAAGCAATACTAGCATCCTT
GGCAAGGACTCGACAGCTGTCTTGACCAGCTTTGGCCTTCTGGTCAAAGAAGAGAGCAACGTGATCATCCGCAAC
CTAGGTGTGAAGAAGGTGCTTGCCGCTAACGGCGACGCTATTGGTGTCCAAAAATCAACCAATGTGTGGATTGAC
CACTGCGATGTCTCGTCCGACTTGGATCACGATAAGGACTACTATGACGGACTCATCGATCTGACCCACGCTGCC
GACTTCATCACTGTGTCCAACACCTTCGTCCACGACCACTGGAAGGCCTCCCTGATCGGACACTCGGACAGCAAC
AGCGCCGAGGACACCGGTCATCTGCGTGTCTCCCTGAATAACAACTACTGGTATAACCTTAACTCGCGTGGTCCT
TCCTTCCGTTTCGGCACTGGCCACATCTACAACAACTACTACCTGGACGTCGCCGACGGCATCAACACCCGCGAT
GGCGCTCAGCTTCTAGTTGAGTCAAACACCTTTGTTGATAGCAAGAAGCCCCTCTACTCTACCGACTCTGGTTAT
GCTGTCGCCAATGGCAATGACTTCGGTGATGGAGAAAACACCGCCGCAGCTGGAACCCTGAAGTCGGTTCCCTAC
AGCTACAGCCTGCTTGGCTCGTCTAAGGTCAAGGCTGCTGTTGTTGGCACTGCTGGTCAGACACTTACCTTCTAA
Transcript >Pro_DTO070G2_2|g8253.t1
ATGGCCCCTTTCAACTTGATGGCAGTTTCTCTGCTCGGCTGCTTGTCCAGCCTTGCACTGGGAGCTCCTACTGCA
ACCAGCAATCTGGGAAAGCGCGCAAGTGTCAATGATGTCGCTCCCGGCTATGCCAGCCAGAACGGAGGTACTAAG
GGTGGTGCTGGTGGCACTACTACCACTGTCTCGTCGTATGCTGCCTTCACAGCCGCAGTTTCGGGCGACTCTGCC
AAGGTTGTCGTTGTGAGCGGCCCCATCACGCAGGTAGCCAAACAAGTTCGTGTTGGAAGCAATACTAGCATCCTT
GGCAAGGACTCGACAGCTGTCTTGACCAGCTTTGGCCTTCTGGTCAAAGAAGAGAGCAACGTGATCATCCGCAAC
CTAGGTGTGAAGAAGGTGCTTGCCGCTAACGGCGACGCTATTGGTGTCCAAAAATCAACCAATGTGTGGATTGAC
CACTGCGATGTCTCGTCCGACTTGGATCACGATAAGGACTACTATGACGGACTCATCGATCTGACCCACGCTGCC
GACTTCATCACTGTGTCCAACACCTTCGTCCACGACCACTGGAAGGCCTCCCTGATCGGACACTCGGACAGCAAC
AGCGCCGAGGACACCGGTCATCTGCGTGTCTCCCTGAATAACAACTACTGGTATAACCTTAACTCGCGTGGTCCT
TCCTTCCGTTTCGGCACTGGCCACATCTACAACAACTACTACCTGGACGTCGCCGACGGCATCAACACCCGCGAT
GGCGCTCAGCTTCTAGTTGAGTCAAACACCTTTGTTGATAGCAAGAAGCCCCTCTACTCTACCGACTCTGGTTAT
GCTGTCGCCAATGGCAATGACTTCGGTGATGGAGAAAACACCGCCGCAGCTGGAACCCTGAAGTCGGTTCCCTAC
AGCTACAGCCTGCTTGGCTCGTCTAAGGTCAAGGCTGCTGTTGTTGGCACTGCTGGTCAGACACTTACCTTCTAA
Gene >Pro_DTO070G2_2|g8253.t1
ATGGCCCCTTTCAACTTGATGGCAGTTTCTCTGCTCGGCTGCTTGTCCAGCCTTGCACTGGGAGCTCCTACTGCA
ACCAGCAATCTGGGAAAGCGCGCAAGTGTCAATGATGTGAGTATCAATGCACGATTCGCTCAGGTACCATACGAT
CAACACTCTAACGTCACTCCGAATTAGGTCGCTCCCGGCTATGCCAGCCAGAACGGAGGTACTAAGGGTGGTGCT
GGTGGCACTACTACCACTGTCTCGTCGTATGCTGCCTTCACAGCCGCAGTTTCGGGCGACTCTGCCAAGGTTGTC
GTTGTGAGCGGCCCCATCACGCAGGTAGCCAAACAAGTTCGTGTTGGAAGCAATACTAGCATCCTTGGCAAGGAC
TCGACAGCTGTCTTGACCAGCTTTGGCCTGTATGTTGTGATTCTTAACGTGGATTCGAGATGATACTAATTGTTA
CCCAATATAGTCTGGTCAAAGAAGAGAGCAACGTGATCATCCGCAACCTAGGTGTGAAGAAGGTGCTTGCCGCTA
ACGGCGACGCTATTGGTGTCCGTGAGTACATTATGCTGCGGGATATTTATTTCTCTAGGAAATTGAGAAAGGCTG
ACTGGTCTTAGAAAAATCAACCAATGTGTGGATTGACCACTGCGATGTCTCGTCCGACTTGGATCACGATAAGGA
CTACTATGACGGACTCATCGATGTAAGTCCAAATCACAATATGTGGAACCAGAAAAAATCACAGATTGCTAATGT
GAACAAGCTGACCCACGCTGCCGACTTCATCACTGTGTCCAACACCTTCGTCCACGACCACTGGAAGGCCTCCCT
GATCGGACACTCGGACAGCAACAGCGCCGAGGACACCGGTCATCTGCGTGTCTCCCTGAATAACAACTACTGGTA
TAACCTTAACTCGCGTGGTCCTTCCTTCCGTTTCGGCACTGGCCACATCTACAACAACTACTACCTGGACGTCGC
CGACGGCATCAACACCCGCGATGGCGCTCAGCTTCTAGTTGAGTCAAACACCTTTGTTGATAGCAAGAAGCCCCT
CTACTCTACCGACTCTGGTTATGCTGTCGCCAATGGCAATGACTTCGGTGATGGAGAAAACACCGCCGCAGCTGG
AACCCTGAAGTCGGTTCCCTACAGCTACAGCCTGCTTGGCTCGTCTAAGGTCAAGGCTGCTGTTGTTGGCACTGC
TGGTCAGACACTTACCTTCTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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