Protein ID | Pro_DTO070G2_2|g8175.t1 |
Gene name | |
Location | scaffold_17:60756..62353 |
Strand | - |
Gene length (bp) | 1597 |
Transcript length (bp) | 1470 |
Coding sequence length (bp) | 1470 |
Protein length (aa) | 490 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF00085 | Thioredoxin | Thioredoxin | 2.8E-25 | 31 | 137 |
PF04756 | OST3_OST6 | OST3 / OST6 family, transporter family | 2.2E-07 | 26 | 153 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
Yes | 1 - 22 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Pro_DTO070G2_2|g8175.t1 MLHSASLLLVTSLLAALPVNADGLYTKNSPVIQLNPKTYNSLIANSNYTSIVEFYAPWCGHCKNLKPAFEKAAKN LDGLAKVAAINCDDDENKAFCGQMGVQGFPTLKIVTPSKKPGKPRVEDYQGARSAKGIVDAVVDRIPNHVKRATD KDLDKWLGQNEDRPKAILFTEKGTTGALIRALAVDFLGAIDIAQVRNKESASVKKFGVTEFPTLVLVPSADTEHK IYTGDLKKKPITEFLSQAATPNPDASPRSASDSKPKSKPKSKPASKPTSIVDDAEDLKPTASENQDTTDPSAKPI QVPIPAPPIPNLSTPESLDSACLASKSGTCVLVILPEASEPDAALPAPATEALASLAEIGHKHAQRGTHLFPLYA VPAINTRSKTLREALALADGQTVEIIALNARRGWWRRFSGADADFGAVAIESWVDAIRLGEGAKEKLPEGIVVSD EAEVKPEAEAEVEPDAETVEADAEPKPEADEQAVEHDEL* |
Coding | >Pro_DTO070G2_2|g8175.t1 ATGCTGCACAGTGCCAGTCTTTTGCTTGTCACGTCGCTCCTTGCGGCATTGCCTGTTAACGCCGATGGACTATAC ACCAAGAATTCGCCGGTGATCCAGTTGAATCCTAAAACCTACAACTCGCTTATTGCAAATTCGAATTATACCTCG ATCGTCGAATTCTACGCGCCTTGGTGCGGCCATTGCAAGAACCTCAAACCCGCATTCGAAAAAGCCGCGAAAAAC CTTGACGGACTCGCAAAAGTCGCCGCGATCAACTGCGACGATGACGAAAACAAAGCCTTCTGCGGACAGATGGGT GTCCAGGGCTTCCCGACCTTGAAAATAGTGACACCTTCCAAGAAGCCCGGGAAGCCCCGTGTTGAGGACTACCAA GGTGCGCGCAGCGCGAAAGGTATCGTCGACGCAGTCGTCGACCGCATCCCCAACCACGTGAAGCGCGCAACAGAC AAGGACTTGGACAAATGGCTTGGACAAAACGAGGACCGGCCCAAGGCCATCCTCTTCACAGAGAAGGGTACAACT GGTGCTCTGATCCGTGCTCTGGCAGTTGACTTCCTCGGTGCAATTGACATCGCCCAAGTACGGAACAAAGAATCC GCCTCCGTGAAGAAGTTCGGCGTAACCGAGTTCCCGACGCTTGTCCTCGTCCCCAGCGCTGATACTGAGCACAAA ATCTACACCGGCGACTTGAAGAAGAAGCCAATCACAGAATTCTTGAGCCAAGCGGCAACACCCAACCCCGACGCG TCCCCCCGCTCCGCGTCCGACTCCAAGCCCAAGTCGAAACCGAAGTCCAAGCCCGCTTCCAAGCCTACCTCCATC GTCGACGATGCCGAGGACCTCAAACCCACCGCCTCCGAGAACCAGGACACAACAGACCCCTCCGCCAAGCCGATT CAAGTCCCTATCCCCGCACCCCCAATTCCAAACCTCTCTACCCCCGAATCCCTCGACTCAGCCTGTCTCGCATCA AAGTCCGGCACCTGTGTGCTAGTCATTCTCCCTGAGGCGAGCGAGCCTGACGCCGCGCTTCCAGCGCCTGCCACC GAGGCGCTCGCAAGCCTAGCTGAGATCGGTCACAAGCACGCCCAGCGCGGAACGCACCTCTTCCCGCTCTATGCC GTCCCTGCTATCAACACCAGGTCTAAGACTCTGCGTGAGGCATTGGCGTTAGCTGACGGCCAGACGGTTGAAATT ATCGCGTTGAATGCGCGTCGCGGATGGTGGCGTCGGTTCAGTGGCGCCGATGCGGACTTTGGGGCTGTCGCTATT GAGTCTTGGGTTGATGCCATTCGGTTGGGTGAGGGTGCTAAAGAGAAGTTGCCTGAGGGTATTGTGGTCAGTGAT GAGGCTGAGGTTAAGCCTGAGGCGGAAGCTGAGGTTGAACCTGATGCTGAGACAGTCGAAGCTGATGCTGAACCT AAGCCTGAGGCCGACGAACAGGCCGTGGAGCATGATGAGCTGTGA |
Transcript | >Pro_DTO070G2_2|g8175.t1 ATGCTGCACAGTGCCAGTCTTTTGCTTGTCACGTCGCTCCTTGCGGCATTGCCTGTTAACGCCGATGGACTATAC ACCAAGAATTCGCCGGTGATCCAGTTGAATCCTAAAACCTACAACTCGCTTATTGCAAATTCGAATTATACCTCG ATCGTCGAATTCTACGCGCCTTGGTGCGGCCATTGCAAGAACCTCAAACCCGCATTCGAAAAAGCCGCGAAAAAC CTTGACGGACTCGCAAAAGTCGCCGCGATCAACTGCGACGATGACGAAAACAAAGCCTTCTGCGGACAGATGGGT GTCCAGGGCTTCCCGACCTTGAAAATAGTGACACCTTCCAAGAAGCCCGGGAAGCCCCGTGTTGAGGACTACCAA GGTGCGCGCAGCGCGAAAGGTATCGTCGACGCAGTCGTCGACCGCATCCCCAACCACGTGAAGCGCGCAACAGAC AAGGACTTGGACAAATGGCTTGGACAAAACGAGGACCGGCCCAAGGCCATCCTCTTCACAGAGAAGGGTACAACT GGTGCTCTGATCCGTGCTCTGGCAGTTGACTTCCTCGGTGCAATTGACATCGCCCAAGTACGGAACAAAGAATCC GCCTCCGTGAAGAAGTTCGGCGTAACCGAGTTCCCGACGCTTGTCCTCGTCCCCAGCGCTGATACTGAGCACAAA ATCTACACCGGCGACTTGAAGAAGAAGCCAATCACAGAATTCTTGAGCCAAGCGGCAACACCCAACCCCGACGCG TCCCCCCGCTCCGCGTCCGACTCCAAGCCCAAGTCGAAACCGAAGTCCAAGCCCGCTTCCAAGCCTACCTCCATC GTCGACGATGCCGAGGACCTCAAACCCACCGCCTCCGAGAACCAGGACACAACAGACCCCTCCGCCAAGCCGATT CAAGTCCCTATCCCCGCACCCCCAATTCCAAACCTCTCTACCCCCGAATCCCTCGACTCAGCCTGTCTCGCATCA AAGTCCGGCACCTGTGTGCTAGTCATTCTCCCTGAGGCGAGCGAGCCTGACGCCGCGCTTCCAGCGCCTGCCACC GAGGCGCTCGCAAGCCTAGCTGAGATCGGTCACAAGCACGCCCAGCGCGGAACGCACCTCTTCCCGCTCTATGCC GTCCCTGCTATCAACACCAGGTCTAAGACTCTGCGTGAGGCATTGGCGTTAGCTGACGGCCAGACGGTTGAAATT ATCGCGTTGAATGCGCGTCGCGGATGGTGGCGTCGGTTCAGTGGCGCCGATGCGGACTTTGGGGCTGTCGCTATT GAGTCTTGGGTTGATGCCATTCGGTTGGGTGAGGGTGCTAAAGAGAAGTTGCCTGAGGGTATTGTGGTCAGTGAT GAGGCTGAGGTTAAGCCTGAGGCGGAAGCTGAGGTTGAACCTGATGCTGAGACAGTCGAAGCTGATGCTGAACCT AAGCCTGAGGCCGACGAACAGGCCGTGGAGCATGATGAGCTGTGA |
Gene | >Pro_DTO070G2_2|g8175.t1 ATGCTGCACAGTGCCAGTCTTTTGCTTGTCACGTCGCTCCTTGCGGCATTGCCTGTTAACGCCGATGGACTATAC ACCAAGAATTCGCCGGTGATCCAGTTGAATCCTAAAACCTACAACTCGCTTATTGCAAATTCGAATTATACCTCG GTGAGTGCCTATGGTCTTCCTAAATGCGCAAAATCGACTAATAGTTGCATAGATCGTCGAGTAAGCTTCTCCCGC ACTCAAGCTATCTAGCTCTCTGCCTCCACCCTCCGACCTTCACTCACCTTTTCCACTTAGATTCTACGCGCCTTG GTGCGGCCATTGCAAGAACCTCAAACCCGCATTCGAAAAAGCCGCGAAAAACCTTGACGGACTCGCAAAAGTCGC CGCGATCAACTGCGACGATGACGAAAACAAAGCCTTCTGCGGACAGATGGGTGTCCAGGGCTTCCCGACCTTGAA AATAGTGACACCTTCCAAGAAGCCCGGGAAGCCCCGTGTTGAGGACTACCAAGGTGCGCGCAGCGCGAAAGGTAT CGTCGACGCAGTCGTCGACCGCATCCCCAACCACGTGAAGCGCGCAACAGACAAGGACTTGGACAAATGGCTTGG ACAAAACGAGGACCGGCCCAAGGCCATCCTCTTCACAGAGAAGGGTACAACTGGTGCTCTGATCCGTGCTCTGGC AGTTGACTTCCTCGGTGCAATTGACATCGCCCAAGTACGGAACAAAGAATCCGCCTCCGTGAAGAAGTTCGGCGT AACCGAGTTCCCGACGCTTGTCCTCGTCCCCAGCGCTGATACTGAGCACAAAATCTACACCGGCGACTTGAAGAA GAAGCCAATCACAGAATTCTTGAGCCAAGCGGCAACACCCAACCCCGACGCGTCCCCCCGCTCCGCGTCCGACTC CAAGCCCAAGTCGAAACCGAAGTCCAAGCCCGCTTCCAAGCCTACCTCCATCGTCGACGATGCCGAGGACCTCAA ACCCACCGCCTCCGAGAACCAGGACACAACAGACCCCTCCGCCAAGCCGATTCAAGTCCCTATCCCCGCACCCCC AATTCCAAACCTCTCTACCCCCGAATCCCTCGACTCAGCCTGTCTCGCATCAAAGTCCGGCACCTGTGTGCTAGT CATTCTCCCTGAGGCGAGCGAGCCTGACGCCGCGCTTCCAGCGCCTGCCACCGAGGCGCTCGCAAGCCTAGCTGA GATCGGTCACAAGCACGCCCAGCGCGGAACGCACCTCTTCCCGCTCTATGCCGTCCCTGCTATCAACACCAGGTC TAAGACTCTGCGTGAGGCATTGGCGTTAGCTGACGGCCAGACGGTTGAAATTATCGCGTTGAATGCGCGTCGCGG ATGGTGGCGTCGGTTCAGTGGCGCCGATGCGGACTTTGGGGCTGTCGCTATTGAGTCTTGGGTTGATGCCATTCG GTTGGGTGAGGGTGCTAAAGAGAAGTTGCCTGAGGGTATTGTGGTCAGTGATGAGGCTGAGGTTAAGCCTGAGGC GGAAGCTGAGGTTGAACCTGATGCTGAGACAGTCGAAGCTGATGCTGAACCTAAGCCTGAGGCCGACGAACAGGC CGTGGAGCATGATGAGCTGTGA |