Protein ID | Pro_DTO070G2_2|g8150.t1 |
Gene name | |
Location | scaffold_16:464135..466187 |
Strand | - |
Gene length (bp) | 2052 |
Transcript length (bp) | 1926 |
Coding sequence length (bp) | 1926 |
Protein length (aa) | 642 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF07885 | Ion_trans_2 | Ion channel | 1.2E-12 | 213 | 286 |
PF07885 | Ion_trans_2 | Ion channel | 2.2E-16 | 370 | 445 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 68 | 0.45 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 48 | 70 | 22 |
2 | 94 | 116 | 22 |
3 | 129 | 151 | 22 |
4 | 166 | 188 | 22 |
5 | 208 | 227 | 19 |
6 | 263 | 285 | 22 |
7 | 360 | 382 | 22 |
8 | 392 | 414 | 22 |
9 | 421 | 440 | 19 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Pro_DTO070G2_2|g8150.t1 MNEPGFDDAIADEAVALDRTASSPNQKIDEINKLSQHDTEYQQAARWWLASTAYPLVAGTFGPMASAFNICSLSQ PWRMDLTSSGGTDIPDPKWVTAINAISLVFALVANLALSLTMARRIRFEIAQPIIVVGWYISSAFLIAILIPFGV NMYKPENNGRIYSQSYYYGTFAAGLYFIIASLMAVTGYGAYRGYSSRKFNLTTSQRTLMLQTIIFCFYLLGGAAV YSKVEGWRFLDAVYFADYTLLTIGVGNFSPSTHLGRGLLFPYAIGGIIILGLIISSIRTLMLENGKQKIGNMLTA QTRKYLLREAFSDRSGAKGIIPSLGKKSAKAEGRSEREQRKREFIAMRQVCKLANVQHKWLSLLLSFLLWMTIWL IGGVVFWRSESNAKWSYFEALYFAYTSLLTVGYGDLYPISSLGKSFFVFWSLLAVPTITILISNIGDTVIRFIRD VTLFIGELTILPGDHSFVDRLKTLTHISWVRWWMEETTGEKEGAQQHAQFSQNQDPNKENGNDFDFKNNKEEKQA ENIHQYIYLLFRELRKIIEYASNTPSRKFDYLEWEYYMSLIEGDNKPKVLGDEANDGQAQAAREWSWTDQENPLL AETSEVQWLLGRLTEVLDRELRRASQVHHVSERAKGDGAED* |
Coding | >Pro_DTO070G2_2|g8150.t1 ATGAACGAACCTGGTTTCGATGACGCCATTGCCGACGAAGCAGTGGCTCTCGACCGCACCGCCAGCTCTCCAAAT CAGAAGATAGACGAAATCAATAAGTTGTCGCAACATGATACCGAGTACCAGCAAGCTGCGCGTTGGTGGCTCGCA AGTACGGCATACCCTCTAGTAGCTGGCACTTTCGGGCCGATGGCTAGCGCTTTCAATATCTGTTCTTTATCACAA CCATGGCGAATGGACCTCACCAGCAGCGGTGGGACAGATATCCCGGATCCAAAATGGGTCACCGCTATCAACGCA ATATCACTTGTCTTTGCACTTGTCGCCAACCTAGCCCTCTCGCTTACCATGGCCCGACGCATCCGTTTCGAAATC GCCCAGCCAATCATCGTCGTAGGGTGGTACATCTCATCGGCGTTCTTGATCGCAATCTTAATTCCCTTCGGCGTG AACATGTACAAGCCCGAGAACAACGGTCGAATCTACTCGCAGAGTTATTACTATGGCACATTCGCAGCAGGGTTA TATTTCATCATCGCGTCATTAATGGCAGTGACTGGATATGGTGCCTACCGTGGCTACTCTAGCCGAAAATTCAAT CTGACTACGAGCCAACGAACACTCATGCTGCAAACTATCATTTTCTGCTTCTATCTTCTGGGCGGTGCAGCCGTC TACTCTAAGGTCGAGGGATGGCGCTTCCTAGACGCAGTATATTTTGCAGACTATACATTGCTCACCATCGGCGTG GGTAATTTCTCGCCAAGTACGCATCTCGGCCGGGGTTTGCTTTTCCCATATGCAATCGGAGGAATCATTATCCTT GGTCTTATCATATCCTCCATCCGTACGCTTATGTTGGAAAATGGCAAGCAAAAGATTGGCAACATGTTGACAGCA CAAACGCGCAAATACCTACTCAGAGAAGCCTTCTCGGACCGTTCTGGTGCTAAGGGTATTATCCCCTCGCTCGGG AAGAAGAGTGCCAAAGCGGAAGGCCGCAGCGAGCGGGAGCAGCGCAAACGAGAGTTTATAGCCATGCGTCAGGTA TGTAAGCTGGCAAACGTCCAACACAAATGGCTCTCGCTCTTGCTTTCTTTTTTGCTTTGGATGACGATATGGCTG ATCGGAGGTGTCGTTTTCTGGCGCTCGGAGTCGAACGCAAAATGGTCGTACTTTGAGGCTCTATACTTTGCATAT ACAAGTCTTCTGACAGTTGGTTATGGAGATTTGTATCCGATCAGTAGTTTGGGTAAATCCTTCTTCGTTTTTTGG TCCCTGCTTGCCGTTCCTACGATTACTATTCTCATCTCCAATATTGGCGATACCGTCATCCGATTTATTCGTGAC GTTACGCTATTCATTGGCGAGCTCACTATTCTACCGGGTGACCACTCCTTCGTGGACAGGCTTAAGACACTGACT CACATCTCCTGGGTCAGATGGTGGATGGAGGAAACGACGGGCGAAAAAGAAGGTGCACAACAGCACGCACAATTC AGCCAAAATCAAGATCCCAATAAAGAGAACGGCAACGACTTCGACTTCAAGAACAACAAGGAAGAAAAGCAAGCC GAAAACATCCACCAGTACATCTACCTACTCTTCCGAGAGCTACGCAAAATTATTGAGTACGCCAGCAACACTCCA TCCCGGAAATTCGATTATCTAGAATGGGAATATTATATGAGCCTGATTGAAGGAGATAATAAACCCAAGGTTCTT GGAGATGAAGCCAATGATGGACAGGCGCAAGCAGCACGGGAATGGAGTTGGACTGATCAGGAGAATCCTTTGCTT GCCGAAACGAGTGAGGTTCAGTGGCTGCTTGGGCGGTTGACTGAGGTACTTGATCGGGAATTAAGGAGGGCAAGT CAGGTTCATCATGTATCCGAGAGAGCAAAGGGGGATGGAGCAGAGGATTAG |
Transcript | >Pro_DTO070G2_2|g8150.t1 ATGAACGAACCTGGTTTCGATGACGCCATTGCCGACGAAGCAGTGGCTCTCGACCGCACCGCCAGCTCTCCAAAT CAGAAGATAGACGAAATCAATAAGTTGTCGCAACATGATACCGAGTACCAGCAAGCTGCGCGTTGGTGGCTCGCA AGTACGGCATACCCTCTAGTAGCTGGCACTTTCGGGCCGATGGCTAGCGCTTTCAATATCTGTTCTTTATCACAA CCATGGCGAATGGACCTCACCAGCAGCGGTGGGACAGATATCCCGGATCCAAAATGGGTCACCGCTATCAACGCA ATATCACTTGTCTTTGCACTTGTCGCCAACCTAGCCCTCTCGCTTACCATGGCCCGACGCATCCGTTTCGAAATC GCCCAGCCAATCATCGTCGTAGGGTGGTACATCTCATCGGCGTTCTTGATCGCAATCTTAATTCCCTTCGGCGTG AACATGTACAAGCCCGAGAACAACGGTCGAATCTACTCGCAGAGTTATTACTATGGCACATTCGCAGCAGGGTTA TATTTCATCATCGCGTCATTAATGGCAGTGACTGGATATGGTGCCTACCGTGGCTACTCTAGCCGAAAATTCAAT CTGACTACGAGCCAACGAACACTCATGCTGCAAACTATCATTTTCTGCTTCTATCTTCTGGGCGGTGCAGCCGTC TACTCTAAGGTCGAGGGATGGCGCTTCCTAGACGCAGTATATTTTGCAGACTATACATTGCTCACCATCGGCGTG GGTAATTTCTCGCCAAGTACGCATCTCGGCCGGGGTTTGCTTTTCCCATATGCAATCGGAGGAATCATTATCCTT GGTCTTATCATATCCTCCATCCGTACGCTTATGTTGGAAAATGGCAAGCAAAAGATTGGCAACATGTTGACAGCA CAAACGCGCAAATACCTACTCAGAGAAGCCTTCTCGGACCGTTCTGGTGCTAAGGGTATTATCCCCTCGCTCGGG AAGAAGAGTGCCAAAGCGGAAGGCCGCAGCGAGCGGGAGCAGCGCAAACGAGAGTTTATAGCCATGCGTCAGGTA TGTAAGCTGGCAAACGTCCAACACAAATGGCTCTCGCTCTTGCTTTCTTTTTTGCTTTGGATGACGATATGGCTG ATCGGAGGTGTCGTTTTCTGGCGCTCGGAGTCGAACGCAAAATGGTCGTACTTTGAGGCTCTATACTTTGCATAT ACAAGTCTTCTGACAGTTGGTTATGGAGATTTGTATCCGATCAGTAGTTTGGGTAAATCCTTCTTCGTTTTTTGG TCCCTGCTTGCCGTTCCTACGATTACTATTCTCATCTCCAATATTGGCGATACCGTCATCCGATTTATTCGTGAC GTTACGCTATTCATTGGCGAGCTCACTATTCTACCGGGTGACCACTCCTTCGTGGACAGGCTTAAGACACTGACT CACATCTCCTGGGTCAGATGGTGGATGGAGGAAACGACGGGCGAAAAAGAAGGTGCACAACAGCACGCACAATTC AGCCAAAATCAAGATCCCAATAAAGAGAACGGCAACGACTTCGACTTCAAGAACAACAAGGAAGAAAAGCAAGCC GAAAACATCCACCAGTACATCTACCTACTCTTCCGAGAGCTACGCAAAATTATTGAGTACGCCAGCAACACTCCA TCCCGGAAATTCGATTATCTAGAATGGGAATATTATATGAGCCTGATTGAAGGAGATAATAAACCCAAGGTTCTT GGAGATGAAGCCAATGATGGACAGGCGCAAGCAGCACGGGAATGGAGTTGGACTGATCAGGAGAATCCTTTGCTT GCCGAAACGAGTGAGGTTCAGTGGCTGCTTGGGCGGTTGACTGAGGTACTTGATCGGGAATTAAGGAGGGCAAGT CAGGTTCATCATGTATCCGAGAGAGCAAAGGGGGATGGAGCAGAGGATTAG |
Gene | >Pro_DTO070G2_2|g8150.t1 ATGAACGAACCTGGTTTCGATGACGCCATTGCCGACGAAGCAGTGGCTCTCGACCGCACCGCCAGCTCTCCAAAT CAGAAGATAGACGAAATCAATAAGTTGTCGCAACATGATACCGAGTACCAGCAAGCTGCGCGTTGGTGGCTCGCA AGTACGGCATACCCTCTAGTAGCTGTATGCAGAAACCTACTATGTCATCCTTTACTTTGGAAGTCCACATTCTCA TTATTCTTTTCAGGGCACTTTCGGGCCGATGGCTAGCGCTTTCAATATCTGTTCTTTATCACAACCATGGCGAAT GGACCTCACCAGCAGCGGTGGGACAGATATCCCGGATCCAAAATGGTAATTAATATGATCAGACATACCCTGAAT GATTCTCCCGGTAACCTCATATGCGGTTGCAGGGTCACCGCTATCAACGCAATATCACTTGTCTTTGCACTTGTC GCCAACCTAGCCCTCTCGCTTACCATGGCCCGACGCATCCGTTTCGAAATCGCCCAGCCAATCATCGTCGTAGGG TGGTACATCTCATCGGCGTTCTTGATCGCAATCTTAATTCCCTTCGGCGTGAACATGTACAAGCCCGAGAACAAC GGTCGAATCTACTCGCAGAGTTATTACTATGGCACATTCGCAGCAGGGTTATATTTCATCATCGCGTCATTAATG GCAGTGACTGGATATGGTGCCTACCGTGGCTACTCTAGCCGAAAATTCAATCTGACTACGAGCCAACGAACACTC ATGCTGCAAACTATCATTTTCTGCTTCTATCTTCTGGGCGGTGCAGCCGTCTACTCTAAGGTCGAGGGATGGCGC TTCCTAGACGCAGTATATTTTGCAGACTATACATTGCTCACCATCGGCGTGGGTAATTTCTCGCCAAGTACGCAT CTCGGCCGGGGTTTGCTTTTCCCATATGCAATCGGAGGAATCATTATCCTTGGTCTTATCATATCCTCCATCCGT ACGCTTATGTTGGAAAATGGCAAGCAAAAGATTGGCAACATGTTGACAGCACAAACGCGCAAATACCTACTCAGA GAAGCCTTCTCGGACCGTTCTGGTGCTAAGGGTATTATCCCCTCGCTCGGGAAGAAGAGTGCCAAAGCGGAAGGC CGCAGCGAGCGGGAGCAGCGCAAACGAGAGTTTATAGCCATGCGTCAGGTATGTAAGCTGGCAAACGTCCAACAC AAATGGCTCTCGCTCTTGCTTTCTTTTTTGCTTTGGATGACGATATGGCTGATCGGAGGTGTCGTTTTCTGGCGC TCGGAGTCGAACGCAAAATGGTCGTACTTTGAGGCTCTATACTTTGCATATACAAGTCTTCTGACAGTTGGTTAT GGAGATTTGTATCCGATCAGTAGTTTGGGTAAATCCTTCTTCGTTTTTTGGTCCCTGCTTGCCGTTCCTACGATT ACTATTCTCATCTCCAATATTGGCGATACCGTCATCCGATTTATTCGTGACGTTACGCTATTCATTGGCGAGCTC ACTATTCTACCGGGTGACCACTCCTTCGTGGACAGGCTTAAGACACTGACTCACATCTCCTGGGTCAGATGGTGG ATGGAGGAAACGACGGGCGAAAAAGAAGGTGCACAACAGCACGCACAATTCAGCCAAAATCAAGATCCCAATAAA GAGAACGGCAACGACTTCGACTTCAAGAACAACAAGGAAGAAAAGCAAGCCGAAAACATCCACCAGTACATCTAC CTACTCTTCCGAGAGCTACGCAAAATTATTGAGTACGCCAGCAACACTCCATCCCGGAAATTCGATTATCTAGAA TGGGAATATTATATGAGCCTGATTGAAGGAGATAATAAACCCAAGGTTCTTGGAGATGAAGCCAATGATGGACAG GCGCAAGCAGCACGGGAATGGAGTTGGACTGATCAGGAGAATCCTTTGCTTGCCGAAACGAGTGAGGTTCAGTGG CTGCTTGGGCGGTTGACTGAGGTACTTGATCGGGAATTAAGGAGGGCAAGTCAGGTTCATCATGTATCCGAGAGA GCAAAGGGGGATGGAGCAGAGGATTAG |