© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Pro_DTO070G2_2|g8149.t1 |
| Gene name | |
| Location | scaffold_16:461740..463356 |
| Strand | + |
| Gene length (bp) | 1616 |
| Transcript length (bp) | 1497 |
| Coding sequence length (bp) | 1497 |
| Protein length (aa) | 499 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00324 | AA_permease | Amino acid permease | 1.1E-110 | 1 | 458 |
| PF13520 | AA_permease_2 | Amino acid permease | 1.7E-25 | 8 | 441 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0016020 | membrane | Yes |
| GO:0006810 | transport | No |
| GO:0005215 | transporter activity | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0005575 | cellular_component | No |
| GO:0051179 | localization | No |
| GO:0009987 | cellular process | No |
| GO:0003674 | molecular_function | No |
| GO:0051234 | establishment of localization | No |
| GO:0008150 | biological_process | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 20 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 20 | 42 | 22 |
| 2 | 62 | 84 | 22 |
| 3 | 97 | 119 | 22 |
| 4 | 134 | 156 | 22 |
| 5 | 227 | 246 | 19 |
| 6 | 282 | 304 | 22 |
| 7 | 325 | 344 | 19 |
| 8 | 354 | 376 | 22 |
| 9 | 397 | 419 | 22 |
| 10 | 434 | 456 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Pro_DTO070G2_2|g8149.t1 MIGLASSIGMGLWLGSGTSLKNAGPAGIFLGYILSGTIIWSVSQSIGEMAIMYPLPSAFVQWTNIFVDESAGFAL GWAYWFSYWITIANEVQGAITVLNFWTSAVPTAALITIFWFVIVLMNVGAVKWFAEIEVVAAAIKFGFIFVVIIS GIVLSAGGGPKGGYPARPGGTIGFQFWNEMAFINGFKGFISVMPTCIFALSGSENAGLVAAETSNPLRSVPKAVK SIWVRLSLFYILGSLIVTINVSPKDENLFGASGTNSSPFVIMYRNSGVAPLAHIMNAVILVSVLSTGGISGYAGS RVLVGLAQLRMAPKVLQKTDSWGRPWWGLAPTLIIGGGLAYLNVSNGGATVFGWFSNLTSLFTLFGWGMICLSHI RMRAAWKVQGRSVEELPWKSKVFPWAAYWGLFWCVALIIIEFYLAVSPLGDKPSAENFFANYLSVVAIIILYIGA KIFYRGRRWNKLEDINLDACRRFYAPRDEEGKNEKSFAKKWLKFPTKN* |
| Coding | >Pro_DTO070G2_2|g8149.t1 ATGATTGGTCTTGCTTCGTCCATTGGTATGGGCCTTTGGCTAGGATCAGGAACATCTTTGAAAAATGCCGGTCCG GCTGGTATTTTCTTGGGATATATCCTATCTGGCACCATCATTTGGAGTGTCAGTCAGAGTATAGGAGAAATGGCG ATCATGTATCCCCTTCCTAGTGCTTTCGTGCAATGGACTAATATATTCGTCGATGAATCCGCCGGTTTCGCGCTC GGTTGGGCTTACTGGTTCTCTTACTGGATCACCATTGCCAACGAGGTACAAGGAGCTATCACAGTACTCAACTTC TGGACAAGTGCCGTCCCCACTGCCGCTTTGATCACTATATTCTGGTTCGTTATTGTCCTGATGAATGTTGGAGCG GTCAAATGGTTCGCCGAGATCGAAGTCGTGGCTGCCGCAATCAAGTTCGGTTTCATCTTCGTTGTAATCATCTCC GGCATTGTTCTTTCCGCTGGCGGTGGGCCCAAGGGAGGTTATCCGGCGAGACCGGGAGGCACTATTGGCTTCCAG TTTTGGAACGAGATGGCGTTTATCAATGGTTTCAAGGGGTTCATCTCGGTTATGCCGACATGTATCTTCGCCTTG TCTGGATCAGAAAATGCTGGTCTAGTCGCCGCAGAGACCAGCAATCCCCTTCGATCTGTGCCCAAGGCTGTCAAG TCGATCTGGGTGAGATTGAGCTTGTTCTACATCCTAGGAAGTTTGATCGTCACGATCAACGTCAGCCCAAAGGAC GAAAATCTGTTCGGTGCATCTGGCACCAATTCCAGTCCCTTCGTCATCATGTATAGGAACTCTGGAGTGGCTCCG CTAGCTCATATTATGAACGCTGTCATTCTCGTCTCTGTCCTCTCCACTGGTGGTATCTCTGGATACGCTGGGTCC CGAGTACTCGTTGGTCTCGCACAACTTCGCATGGCCCCCAAGGTTCTACAGAAGACCGATAGCTGGGGTCGTCCA TGGTGGGGCCTTGCGCCTACTCTCATCATCGGAGGTGGGCTGGCCTACCTGAACGTCAGCAACGGTGGTGCTACC GTTTTTGGCTGGTTCTCCAACCTGACCTCTCTATTCACTCTCTTCGGATGGGGCATGATCTGCCTGTCACATATC CGTATGCGTGCTGCCTGGAAAGTTCAAGGCCGCTCTGTCGAAGAACTTCCTTGGAAATCAAAGGTCTTCCCTTGG GCTGCCTATTGGGGCCTGTTTTGGTGTGTAGCACTTATCATCATCGAGTTCTATCTGGCCGTGTCGCCCTTGGGT GACAAACCCAGTGCGGAGAACTTCTTCGCCAATTACCTCTCTGTGGTGGCTATTATCATTCTTTATATTGGCGCA AAGATTTTCTACCGCGGTAGAAGATGGAACAAACTCGAAGATATCAACCTTGATGCTTGTAGGAGGTTCTATGCA CCACGGGATGAGGAGGGGAAGAATGAGAAGAGCTTCGCCAAGAAGTGGCTCAAGTTTCCAACCAAGAACTGA |
| Transcript | >Pro_DTO070G2_2|g8149.t1 ATGATTGGTCTTGCTTCGTCCATTGGTATGGGCCTTTGGCTAGGATCAGGAACATCTTTGAAAAATGCCGGTCCG GCTGGTATTTTCTTGGGATATATCCTATCTGGCACCATCATTTGGAGTGTCAGTCAGAGTATAGGAGAAATGGCG ATCATGTATCCCCTTCCTAGTGCTTTCGTGCAATGGACTAATATATTCGTCGATGAATCCGCCGGTTTCGCGCTC GGTTGGGCTTACTGGTTCTCTTACTGGATCACCATTGCCAACGAGGTACAAGGAGCTATCACAGTACTCAACTTC TGGACAAGTGCCGTCCCCACTGCCGCTTTGATCACTATATTCTGGTTCGTTATTGTCCTGATGAATGTTGGAGCG GTCAAATGGTTCGCCGAGATCGAAGTCGTGGCTGCCGCAATCAAGTTCGGTTTCATCTTCGTTGTAATCATCTCC GGCATTGTTCTTTCCGCTGGCGGTGGGCCCAAGGGAGGTTATCCGGCGAGACCGGGAGGCACTATTGGCTTCCAG TTTTGGAACGAGATGGCGTTTATCAATGGTTTCAAGGGGTTCATCTCGGTTATGCCGACATGTATCTTCGCCTTG TCTGGATCAGAAAATGCTGGTCTAGTCGCCGCAGAGACCAGCAATCCCCTTCGATCTGTGCCCAAGGCTGTCAAG TCGATCTGGGTGAGATTGAGCTTGTTCTACATCCTAGGAAGTTTGATCGTCACGATCAACGTCAGCCCAAAGGAC GAAAATCTGTTCGGTGCATCTGGCACCAATTCCAGTCCCTTCGTCATCATGTATAGGAACTCTGGAGTGGCTCCG CTAGCTCATATTATGAACGCTGTCATTCTCGTCTCTGTCCTCTCCACTGGTGGTATCTCTGGATACGCTGGGTCC CGAGTACTCGTTGGTCTCGCACAACTTCGCATGGCCCCCAAGGTTCTACAGAAGACCGATAGCTGGGGTCGTCCA TGGTGGGGCCTTGCGCCTACTCTCATCATCGGAGGTGGGCTGGCCTACCTGAACGTCAGCAACGGTGGTGCTACC GTTTTTGGCTGGTTCTCCAACCTGACCTCTCTATTCACTCTCTTCGGATGGGGCATGATCTGCCTGTCACATATC CGTATGCGTGCTGCCTGGAAAGTTCAAGGCCGCTCTGTCGAAGAACTTCCTTGGAAATCAAAGGTCTTCCCTTGG GCTGCCTATTGGGGCCTGTTTTGGTGTGTAGCACTTATCATCATCGAGTTCTATCTGGCCGTGTCGCCCTTGGGT GACAAACCCAGTGCGGAGAACTTCTTCGCCAATTACCTCTCTGTGGTGGCTATTATCATTCTTTATATTGGCGCA AAGATTTTCTACCGCGGTAGAAGATGGAACAAACTCGAAGATATCAACCTTGATGCTTGTAGGAGGTTCTATGCA CCACGGGATGAGGAGGGGAAGAATGAGAAGAGCTTCGCCAAGAAGTGGCTCAAGTTTCCAACCAAGAACTGA |
| Gene | >Pro_DTO070G2_2|g8149.t1 ATGATTGGTCTTGCTTCGTCCATTGGTATGGGCCTTTGGCTAGGATCAGGAACATCTTTGAAAAATGCCGGTCCG GCTGGTATTTTCTTGGGATATATCCTATCTGGCACCATCATTTGGAGTGTCAGTCAGAGTATAGGAGAAATGGCG ATCATGTATCCCCTTCCTAGTGCTGTGAGTTTGGTGGCTTCTCTCTTGCCGACTGATCATTACTGACCCGGCCCC GCTAGTTCGTGCAATGGACTAATATATTCGTCGATGAATCCGCCGGTTTCGCGCTCGGTTGGGCTTACTGGTTCT CTTACTGGATCACCATTGCCAACGAGGTACAAGGAGCTATCACAGTACTCAACTTCTGGACAAGTGCCGTCCCCA CTGCCGCTTTGATCACTATATTCTGGTTCGTTATTGTCCTGATGAATGTTGGAGCGGTCAAATGGTTCGCCGAGA TCGAAGTCGTGGCTGCCGCAATCAAGTTCGGTTTCATCTTCGTTGTAATCATCTCCGGCATTGTTCTTTCCGCTG GCGGTGGGCCCAAGGGAGGTTATCCGGCGAGACCGGGAGGCACTATTGGCTTCCAGTTTTGGAACGAGATGGCGT TTATCAATGGTTTCAAGGGGTTCATCTCGGTTATGCCGACATGTATCTTCGCCTTGTCTGGATCAGAAAATGCTG GTCTAGTCGCCGCAGAGACCAGCAATCCCCTTCGATCTGTGCCCAAGGCTGTCAAGTCGATCTGGGTGAGATTGA GCTTGTTCTACATCCTAGGAAGTTTGATCGTCACGATCAACGTCAGCCCAAAGGACGAAAATCTGTTCGGTGCAT CTGGCACCAATTCCAGTCCCTTCGTCATCATGTATAGGAACTCTGGAGTGGCTCCGCTAGCTCATATTATGAACG CTGTCATTCTCGTCTCTGTCCTCTCCACTGGTGGTATCTCTGGATACGCTGGGTCCCGAGTACTCGTTGGTCTCG CACAACTTCGCATGGCCCCCAAGGTTAGTCTGGTTCTTTTACCCCGTCCGAGAGTACTGCTGACAAAATGCGAAT TTTCCGTGTAGGTTCTACAGAAGACCGATAGCTGGGGTCGTCCATGGTGGGGCCTTGCGCCTACTCTCATCATCG GAGGTGGGCTGGCCTACCTGAACGTCAGCAACGGTGGTGCTACCGTTTTTGGCTGGTTCTCCAACCTGACCTCTC TATTCACTCTCTTCGGATGGGGCATGATCTGCCTGTCACATATCCGTATGCGTGCTGCCTGGAAAGTTCAAGGCC GCTCTGTCGAAGAACTTCCTTGGAAATCAAAGGTCTTCCCTTGGGCTGCCTATTGGGGCCTGTTTTGGTGTGTAG CACTTATCATCATCGAGTTCTATCTGGCCGTGTCGCCCTTGGGTGACAAACCCAGTGCGGAGAACTTCTTCGCCA ATTACCTCTCTGTGGTGGCTATTATCATTCTTTATATTGGCGCAAAGATTTTCTACCGCGGTAGAAGATGGAACA AACTCGAAGATATCAACCTTGATGCTTGTAGGAGGTTCTATGCACCACGGGATGAGGAGGGGAAGAATGAGAAGA GCTTCGCCAAGAAGTGGCTCAAGTTTCCAACCAAGAACTGA |