© 2022 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | Pro_DTO070G2_2|g8143.t1 |
| Gene name | |
| Location | scaffold_16:444875..446627 |
| Strand | + |
| Gene length (bp) | 1752 |
| Transcript length (bp) | 1623 |
| Coding sequence length (bp) | 1623 |
| Protein length (aa) | 541 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF07690 | MFS_1 | Major Facilitator Superfamily | 3.2E-42 | 30 | 428 |
| PF06609 | TRI12 | Fungal trichothecene efflux pump (TRI12) | 2.6E-16 | 24 | 307 |
| PF00083 | Sugar_tr | Sugar (and other) transporter | 4.2E-13 | 56 | 196 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0016021 | integral component of membrane | Yes |
| GO:0006810 | transport | No |
| GO:0005215 | transporter activity | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0005575 | cellular_component | No |
| GO:0051179 | localization | No |
| GO:0009987 | cellular process | No |
| GO:0003674 | molecular_function | No |
| GO:0031224 | intrinsic component of membrane | No |
| GO:0051234 | establishment of localization | No |
| GO:0008150 | biological_process | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 37 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 20 | 39 | 19 |
| 2 | 60 | 79 | 19 |
| 3 | 89 | 111 | 22 |
| 4 | 146 | 168 | 22 |
| 5 | 178 | 200 | 22 |
| 6 | 216 | 238 | 22 |
| 7 | 242 | 264 | 22 |
| 8 | 285 | 307 | 22 |
| 9 | 322 | 344 | 22 |
| 10 | 351 | 369 | 18 |
| 11 | 379 | 401 | 22 |
| 12 | 414 | 436 | 22 |
| 13 | 491 | 509 | 18 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Pro_DTO070G2_2|g8143.t1 MPNTLTASTLPIEDKQGRGWRFWAIYLSLCVSILLAAVESTVTSTALPSISDELHAGKDYVWFVNSYFLTSACFQ PLFGQTANIFGRRWLMIGAVAFFVLGSGISGGAINSAMMVAGRAIQGIGGGGINVLIELIVSDLVPLRERGNFMA MIFAVFSIGTSLGPFVGGALVQHSSWRWVFYLNLPIGGTALVLLFFFLHVNYKQEPWEENIKKIDYLGNALLMTS IVSILLALTWAGTAYSWSSWRIIMCLVLGFVGMVIFHIYEASPWCPEPMMPPHIFGNRTSFAALILSFIHNMLTF WVVYFMPVYFQSVKLSTSARAGVQFLPTVILAVPTAIVGGVVLSKWGFYKPIHIFGMGLSLVGLGLFTLLDADSS DGKWIVYQIITAIGLGMLLTTILPAVQVGLEEKDVGLATATWAFVRSYGAIWGISIPAAIFNTQFGRLSSRISDS SVAAQLGGGEAYSHVSANFIRSLEPQVRDEVISVYSDTLKLVWQVSLGFAALGFIVIWFERQIKLRTELETEYGI QVPKEDKDNKEAVEA* |
| Coding | >Pro_DTO070G2_2|g8143.t1 ATGCCAAACACTTTGACAGCATCGACACTGCCCATTGAGGACAAACAGGGGAGGGGATGGCGCTTTTGGGCGATC TACCTCTCGCTTTGTGTGTCAATCTTGTTAGCTGCGGTTGAATCGACGGTCACGTCCACCGCGTTGCCATCTATC TCCGATGAATTGCATGCGGGAAAGGATTATGTTTGGTTTGTCAACTCGTATTTTCTCACCAGTGCGTGCTTTCAA CCGCTTTTCGGACAGACTGCAAATATCTTCGGTCGACGATGGTTGATGATCGGCGCGGTGGCATTTTTCGTACTT GGCAGCGGTATAAGCGGTGGTGCTATCAACTCTGCCATGATGGTTGCTGGGCGAGCGATTCAGGGCATTGGTGGG GGAGGTATCAACGTCCTGATCGAGCTGATCGTCAGCGATTTGGTCCCATTGCGCGAACGAGGAAACTTCATGGCC ATGATCTTCGCGGTGTTCTCTATTGGAACATCCCTTGGTCCGTTCGTCGGTGGTGCTCTAGTACAACACAGCTCC TGGCGATGGGTCTTTTATCTAAATCTCCCAATTGGAGGAACGGCACTCGTTCTTCTGTTCTTTTTCTTACACGTC AACTACAAACAAGAGCCCTGGGAGGAAAATATCAAGAAGATCGATTATCTCGGCAATGCACTACTAATGACGTCC ATCGTCTCTATCCTACTAGCCCTCACCTGGGCCGGTACCGCCTATTCCTGGTCTAGCTGGCGCATCATTATGTGT CTGGTGCTAGGATTTGTTGGCATGGTCATATTCCACATTTACGAGGCCAGCCCTTGGTGCCCAGAGCCCATGATG CCACCGCATATTTTCGGCAACCGCACCTCCTTCGCCGCTCTGATTTTGTCTTTCATCCACAACATGCTCACCTTC TGGGTGGTCTATTTTATGCCTGTGTACTTCCAGTCGGTGAAGCTCTCTACCTCGGCCCGTGCTGGTGTGCAATTT TTACCTACCGTAATCCTTGCTGTTCCGACTGCTATAGTCGGAGGTGTCGTCCTCAGCAAATGGGGCTTCTATAAA CCAATTCACATCTTTGGAATGGGTCTGTCCCTTGTGGGGCTGGGGCTCTTCACACTCCTTGACGCAGACTCAAGC GATGGAAAGTGGATCGTCTATCAAATTATCACCGCCATAGGTCTGGGTATGCTGCTCACAACGATACTGCCTGCA GTTCAGGTTGGCCTCGAAGAAAAGGATGTTGGGCTAGCCACGGCTACCTGGGCATTTGTTCGTAGTTATGGTGCC ATCTGGGGAATTTCAATCCCGGCTGCCATATTCAACACACAATTTGGGCGACTGTCAAGCCGCATATCAGACTCT TCTGTTGCTGCACAGCTGGGAGGTGGAGAGGCATACTCTCATGTATCTGCAAATTTCATCCGGTCCCTTGAGCCG CAAGTTCGCGACGAGGTGATAAGTGTGTATTCTGATACTCTGAAGCTGGTCTGGCAAGTGTCTCTGGGATTTGCT GCTCTAGGATTCATTGTCATCTGGTTTGAAAGGCAGATCAAGCTGCGCACCGAGTTAGAAACAGAGTATGGAATC CAGGTCCCGAAAGAGGACAAAGACAACAAGGAAGCTGTTGAGGCATAG |
| Transcript | >Pro_DTO070G2_2|g8143.t1 ATGCCAAACACTTTGACAGCATCGACACTGCCCATTGAGGACAAACAGGGGAGGGGATGGCGCTTTTGGGCGATC TACCTCTCGCTTTGTGTGTCAATCTTGTTAGCTGCGGTTGAATCGACGGTCACGTCCACCGCGTTGCCATCTATC TCCGATGAATTGCATGCGGGAAAGGATTATGTTTGGTTTGTCAACTCGTATTTTCTCACCAGTGCGTGCTTTCAA CCGCTTTTCGGACAGACTGCAAATATCTTCGGTCGACGATGGTTGATGATCGGCGCGGTGGCATTTTTCGTACTT GGCAGCGGTATAAGCGGTGGTGCTATCAACTCTGCCATGATGGTTGCTGGGCGAGCGATTCAGGGCATTGGTGGG GGAGGTATCAACGTCCTGATCGAGCTGATCGTCAGCGATTTGGTCCCATTGCGCGAACGAGGAAACTTCATGGCC ATGATCTTCGCGGTGTTCTCTATTGGAACATCCCTTGGTCCGTTCGTCGGTGGTGCTCTAGTACAACACAGCTCC TGGCGATGGGTCTTTTATCTAAATCTCCCAATTGGAGGAACGGCACTCGTTCTTCTGTTCTTTTTCTTACACGTC AACTACAAACAAGAGCCCTGGGAGGAAAATATCAAGAAGATCGATTATCTCGGCAATGCACTACTAATGACGTCC ATCGTCTCTATCCTACTAGCCCTCACCTGGGCCGGTACCGCCTATTCCTGGTCTAGCTGGCGCATCATTATGTGT CTGGTGCTAGGATTTGTTGGCATGGTCATATTCCACATTTACGAGGCCAGCCCTTGGTGCCCAGAGCCCATGATG CCACCGCATATTTTCGGCAACCGCACCTCCTTCGCCGCTCTGATTTTGTCTTTCATCCACAACATGCTCACCTTC TGGGTGGTCTATTTTATGCCTGTGTACTTCCAGTCGGTGAAGCTCTCTACCTCGGCCCGTGCTGGTGTGCAATTT TTACCTACCGTAATCCTTGCTGTTCCGACTGCTATAGTCGGAGGTGTCGTCCTCAGCAAATGGGGCTTCTATAAA CCAATTCACATCTTTGGAATGGGTCTGTCCCTTGTGGGGCTGGGGCTCTTCACACTCCTTGACGCAGACTCAAGC GATGGAAAGTGGATCGTCTATCAAATTATCACCGCCATAGGTCTGGGTATGCTGCTCACAACGATACTGCCTGCA GTTCAGGTTGGCCTCGAAGAAAAGGATGTTGGGCTAGCCACGGCTACCTGGGCATTTGTTCGTAGTTATGGTGCC ATCTGGGGAATTTCAATCCCGGCTGCCATATTCAACACACAATTTGGGCGACTGTCAAGCCGCATATCAGACTCT TCTGTTGCTGCACAGCTGGGAGGTGGAGAGGCATACTCTCATGTATCTGCAAATTTCATCCGGTCCCTTGAGCCG CAAGTTCGCGACGAGGTGATAAGTGTGTATTCTGATACTCTGAAGCTGGTCTGGCAAGTGTCTCTGGGATTTGCT GCTCTAGGATTCATTGTCATCTGGTTTGAAAGGCAGATCAAGCTGCGCACCGAGTTAGAAACAGAGTATGGAATC CAGGTCCCGAAAGAGGACAAAGACAACAAGGAAGCTGTTGAGGCATAG |
| Gene | >Pro_DTO070G2_2|g8143.t1 ATGCCAAACACTTTGACAGCATCGACACTGCCCATTGAGGACAAACAGGGGAGGGGATGGCGCTTTTGGGCGATC TACCTCTCGCTTTGTGTGTCAATCTTGTTAGCTGCGGTTGAATCGACGGTCACGTCCACCGCGTTGCCATCTATC TCCGATGAATTGCATGCGGGAAAGGATTATGTTTGGTTTGTCAACTCGTATTTTCTCACCAGGTGAGTTGAAAGA TGAATCCAAAGACTTCGAGGAAGCTGATCTGACTCTTCGGGTTTCAAGTGCGTGCTTTCAACCGCTTTTCGGACA GACTGCAAATATCTTCGGTCGACGATGGTTGATGATCGGCGCGGTGGCATTTTTCGTACTTGGCAGCGGTATAAG CGGTGGTGCTATCAACTCTGCCATGATGGTTGCTGGGCGAGCGATTCAGGGCATTGGTGGGGGAGGTATCAACGT CCTGATCGAGCTGATCGTCAGCGATTTGGTCCCATTGCGCGAACGAGGAAACTTCATGGCCATGATCTTCGCGGT GTTCTCTATTGGAACATCCCTTGGTCCGTTCGTCGGTGGTGCTCTAGTACAACACAGCTCCTGGCGATGGGTCGT GAGTGCTTAATATACTTCACACCAAGTCAAGCTCACCTAGCTAACCCATGCATCAACAATCAACAGTTTTATCTA AATCTCCCAATTGGAGGAACGGCACTCGTTCTTCTGTTCTTTTTCTTACACGTCAACTACAAACAAGAGCCCTGG GAGGAAAATATCAAGAAGATCGATTATCTCGGCAATGCACTACTAATGACGTCCATCGTCTCTATCCTACTAGCC CTCACCTGGGCCGGTACCGCCTATTCCTGGTCTAGCTGGCGCATCATTATGTGTCTGGTGCTAGGATTTGTTGGC ATGGTCATATTCCACATTTACGAGGCCAGCCCTTGGTGCCCAGAGCCCATGATGCCACCGCATATTTTCGGCAAC CGCACCTCCTTCGCCGCTCTGATTTTGTCTTTCATCCACAACATGCTCACCTTCTGGGTGGTCTATTTTATGCCT GTGTACTTCCAGTCGGTGAAGCTCTCTACCTCGGCCCGTGCTGGTGTGCAATTTTTACCTACCGTAATCCTTGCT GTTCCGACTGCTATAGTCGGAGGTGTCGTCCTCAGCAAATGGGGCTTCTATAAACCAATTCACATCTTTGGAATG GGTCTGTCCCTTGTGGGGCTGGGGCTCTTCACACTCCTTGACGCAGACTCAAGCGATGGAAAGTGGATCGTCTAT CAAATTATCACCGCCATAGGTCTGGGTATGCTGCTCACAACGATACTGCCTGCAGTTCAGGTTGGCCTCGAAGAA AAGGATGTTGGGCTAGCCACGGCTACCTGGGCATTTGTTCGTAGTTATGGTGCCATCTGGGGAATTTCAATCCCG GCTGCCATATTCAACACACAATTTGGGCGACTGTCAAGCCGCATATCAGACTCTTCTGTTGCTGCACAGCTGGGA GGTGGAGAGGCATACTCTCATGTATCTGCAAATTTCATCCGGTCCCTTGAGCCGCAAGTTCGCGACGAGGTGATA AGTGTGTATTCTGATACTCTGAAGCTGGTCTGGCAAGTGTCTCTGGGATTTGCTGCTCTAGGATTCATTGTCATC TGGTTTGAAAGGCAGATCAAGCTGCGCACCGAGTTAGAAACAGAGTATGGAATCCAGGTCCCGAAAGAGGACAAA GACAACAAGGAAGCTGTTGAGGCATAG |