© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Pro_DTO070G2_2|g7963.t1 |
| Gene name | |
| Location | scaffold_16:16015..17492 |
| Strand | + |
| Gene length (bp) | 1477 |
| Transcript length (bp) | 1197 |
| Coding sequence length (bp) | 1197 |
| Protein length (aa) | 399 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF07992 | Pyr_redox_2 | Pyridine nucleotide-disulphide oxidoreductase | 2.0E-30 | 7 | 316 |
| PF00070 | Pyr_redox | Pyridine nucleotide-disulphide oxidoreductase | 7.4E-10 | 149 | 213 |
| PF13738 | Pyr_redox_3 | Pyridine nucleotide-disulphide oxidoreductase | 4.2E-08 | 109 | 272 |
| PF13434 | Lys_Orn_oxgnase | L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase | 2.3E-05 | 109 | 186 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0016491 | oxidoreductase activity | Yes |
| GO:0003674 | molecular_function | No |
| GO:0003824 | catalytic activity | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 22 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Pro_DTO070G2_2|g7963.t1 MSTPLRNIIVVGGSFVGRMTAQELASIVPSTHRVLLTEPHSHFHHLFTFPRFAIVPGQEHKAFIPYSGIFKASPN PSNHGVVQARVLSVKPNHIELDREWHGSKELPFDYVVLATGTRLSKPAAMDDDDKASSVEYLQKHQASVKRSKSI LIVGGGAVGVQMATDLKEYYPDKEVTVVQSRPQVMPNFHFGLHHLIKRRFDELGIRLITGSRVIVPPSGFPNDGS TFDVHLTNGNTESTQFVVLATGQTPNNQLVADLKSSRPDSESVINPENGFIRVRPTMQFLDEEYSNMFAVGDIAD TGAQKAARPGSIQAAVVAKNILALIEGRAAENTFVKGPGAIHLTLGMKHNVIFRNPDTVDGQTEPWIKPKDDGRE DLNVEAMWERLGISVENPREYHL* |
| Coding | >Pro_DTO070G2_2|g7963.t1 ATGTCGACCCCATTACGGAATATTATTGTTGTTGGCGGCTCGTTCGTCGGGCGTATGACAGCTCAGGAGCTAGCA TCCATTGTGCCTTCAACACATCGGGTCCTCTTGACTGAGCCACATAGCCATTTCCACCACCTTTTCACCTTTCCT CGGTTTGCGATTGTTCCGGGTCAGGAGCACAAAGCATTCATTCCGTACAGTGGTATCTTCAAGGCGTCGCCCAAT CCCTCCAACCATGGCGTAGTCCAGGCTCGCGTTCTATCGGTCAAGCCCAATCATATTGAGTTGGACCGTGAATGG CATGGCTCAAAGGAACTTCCTTTTGACTATGTCGTTCTTGCGACAGGCACCCGTCTCTCCAAGCCTGCGGCTATG GACGATGATGATAAGGCATCGTCAGTCGAGTATCTACAAAAGCATCAAGCTAGCGTTAAGAGATCCAAGTCGATT TTGATTGTCGGTGGCGGTGCTGTCGGTGTTCAAATGGCGACCGATCTGAAAGAATATTATCCAGACAAGGAAGTG ACCGTGGTTCAATCTAGGCCGCAGGTGATGCCGAACTTCCACTTTGGGCTCCATCACCTTATTAAGAGACGATTT GATGAGTTAGGGATCCGACTCATCACTGGCTCTCGAGTCATTGTTCCACCGAGTGGATTTCCCAACGATGGTAGT ACCTTCGATGTCCATCTCACAAACGGTAACACCGAGTCCACGCAATTCGTCGTCCTAGCCACCGGACAAACTCCA AATAACCAGCTGGTGGCAGACTTGAAGTCTTCTCGCCCGGATAGCGAGTCGGTCATCAATCCAGAGAATGGATTT ATTCGCGTTAGACCCACTATGCAGTTCCTAGATGAAGAATATTCGAACATGTTTGCTGTGGGTGATATTGCAGAT ACCGGTGCCCAAAAGGCCGCTCGTCCAGGCTCAATACAGGCAGCAGTTGTCGCGAAGAACATACTGGCTTTAATT GAAGGACGCGCTGCCGAGAACACTTTTGTTAAGGGACCTGGGGCCATTCATTTGACACTCGGCATGAAACATAAT GTCATTTTCCGCAATCCCGATACTGTGGATGGTCAGACAGAGCCCTGGATCAAGCCAAAGGATGATGGCCGAGAG GATCTGAATGTGGAAGCTATGTGGGAGAGACTGGGTATCTCGGTTGAGAATCCTCGTGAATATCACCTATAA |
| Transcript | >Pro_DTO070G2_2|g7963.t1 ATGTCGACCCCATTACGGAATATTATTGTTGTTGGCGGCTCGTTCGTCGGGCGTATGACAGCTCAGGAGCTAGCA TCCATTGTGCCTTCAACACATCGGGTCCTCTTGACTGAGCCACATAGCCATTTCCACCACCTTTTCACCTTTCCT CGGTTTGCGATTGTTCCGGGTCAGGAGCACAAAGCATTCATTCCGTACAGTGGTATCTTCAAGGCGTCGCCCAAT CCCTCCAACCATGGCGTAGTCCAGGCTCGCGTTCTATCGGTCAAGCCCAATCATATTGAGTTGGACCGTGAATGG CATGGCTCAAAGGAACTTCCTTTTGACTATGTCGTTCTTGCGACAGGCACCCGTCTCTCCAAGCCTGCGGCTATG GACGATGATGATAAGGCATCGTCAGTCGAGTATCTACAAAAGCATCAAGCTAGCGTTAAGAGATCCAAGTCGATT TTGATTGTCGGTGGCGGTGCTGTCGGTGTTCAAATGGCGACCGATCTGAAAGAATATTATCCAGACAAGGAAGTG ACCGTGGTTCAATCTAGGCCGCAGGTGATGCCGAACTTCCACTTTGGGCTCCATCACCTTATTAAGAGACGATTT GATGAGTTAGGGATCCGACTCATCACTGGCTCTCGAGTCATTGTTCCACCGAGTGGATTTCCCAACGATGGTAGT ACCTTCGATGTCCATCTCACAAACGGTAACACCGAGTCCACGCAATTCGTCGTCCTAGCCACCGGACAAACTCCA AATAACCAGCTGGTGGCAGACTTGAAGTCTTCTCGCCCGGATAGCGAGTCGGTCATCAATCCAGAGAATGGATTT ATTCGCGTTAGACCCACTATGCAGTTCCTAGATGAAGAATATTCGAACATGTTTGCTGTGGGTGATATTGCAGAT ACCGGTGCCCAAAAGGCCGCTCGTCCAGGCTCAATACAGGCAGCAGTTGTCGCGAAGAACATACTGGCTTTAATT GAAGGACGCGCTGCCGAGAACACTTTTGTTAAGGGACCTGGGGCCATTCATTTGACACTCGGCATGAAACATAAT GTCATTTTCCGCAATCCCGATACTGTGGATGGTCAGACAGAGCCCTGGATCAAGCCAAAGGATGATGGCCGAGAG GATCTGAATGTGGAAGCTATGTGGGAGAGACTGGGTATCTCGGTTGAGAATCCTCGTGAATATCACCTATAA |
| Gene | >Pro_DTO070G2_2|g7963.t1 ATGTCGACCCCATTACGGAATATTATTGTTGTTGGCGGCTCGTTCGTCGGGCGTGTGGGTTCATTCTGCTGTACA AGATGAAATTCAACTAATGGTCAATACAGATGACAGCTCAGGAGCTAGCATCCATTGTGCCTTCAACACATCGGG TAAGCTATCACTGAGATCTACCTTCGAAAACGAAACTAATGGTTTGTGCAGGTCCTCTTGACTGAGCCACATAGC CATTTCCACCACCTTTTCACCTTTGTAAGTTGACTTCGGTACCAGTGAACGTTCATTCCACTAAGCCTTCGCAGC TAACATGCCCCATAGCCTCGGTTTGCGATTGTTCCGGGTCAGGAGCACAAAGCATTCATTCCGTACAGTGGTATC TTCAAGGCGTCGCCCAATCCCTCCAACCATGGCGTAGTCCAGGCTCGCGTTCTATCGGTCAAGCCCAATCATATT GAGTTGGACCGTGAATGGCATGGCTCAAAGGAACTTCCTTTTGACTATGTCGTTCTTGCGACAGGCACCCGTCTC TCCAAGCCTGCGGCTATGGACGATGATGATAAGGCATCGTCAGTCGAGTATCTACAAAAGCATCAAGCTAGCGTT AAGAGATCCAAGTCGATTTTGATTGTCGGTGGCGGTGCTGTCGGTGTTCAAATGGCGACCGATCTGAAAGAATAT TATCCAGACAAGGAAGTGACCGTGGTTCAATCTAGGCCGCAGGTGATGCCGAACTTCCACTTTGGGCTCCATCAC CTTATTAAGAGACGATTTGATGAGTTAGGGATCCGACTCATCACTGGCTCTCGAGTCATTGTTCCACCGAGTGGA TTTCCCAACGATGGTAGTACCTTCGATGTCCATCTCACAAACGGTAACACCGAGTCCACGCAATTCGTCGTCCTA GCCACCGGACAAACTCCAAATAACCAGCTGGTGGCAGACTTGAAGTCTTCTCGCCCGGATAGCGAGTCGGTCATC AATCCAGAGAATGGATTTATTCGCGTTAGACCCACTATGCAGTTCCTAGATGAAGAATATTCGAACATGTTTGCT GTGGGTGATATTGCAGATACCGGTGCCCAAAAGGCCGCTCGTCCAGGCTCAATACAGGCAGCAGTTGTCGCGAAG AACATACTGGCTTTAATTGAAGGACGCGCTGCCGAGAACACTTTTGTTAAGGGACCTGGGGCCATTCATTTGACA CTCGGCATGGTAAGTCAATCAACCCTTTATGGAGCGAGATTTGAATAGGCTGACTGTTGTTTTTTAGAAACATAA TGTCATTTTCCGCAATCCCGATACTGTGGATGGTCAGACAGAGCCCTGGATCAAGCCAAAGGATGAGTAAGTTCC TTCAATTCCTTATGCCACGCCAGGAGAAGCTAATATATTTACCAGTGGCCGAGAGGATCTGAATGTGGAAGCTAT GTGGGAGAGACTGGGTATCTCGGTTGAGAATCCTCGTGAATATCACCTATAA |