Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO070G2_2|g7866.t1
Gene name
Locationscaffold_15:301672..303239
Strand-
Gene length (bp)1567
Transcript length (bp)1512
Coding sequence length (bp)1512
Protein length (aa) 504

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF11931 SF3a60_Prp9_C SF3a60/Prp9 C-terminal 5.0E-54 383 503
PF16837 SF3A3 Pre-mRNA-splicing factor SF3A3, of SF3a complex, Prp9 2.8E-16 126 177
PF12108 SF3a60_bindingd Splicing factor SF3a60 binding domain 2.3E-15 72 98
PF12874 zf-met Zinc-finger of C2H2 type 8.3E-07 253 276
PF12171 zf-C2H2_jaz Zinc-finger double-stranded RNA-binding 4.4E-07 253 276

GO

GO Term Description Terminal node
GO:0005681 spliceosomal complex Yes
GO:0003723 RNA binding Yes
GO:0000398 mRNA splicing, via spliceosome Yes
GO:0097159 organic cyclic compound binding No
GO:0008150 biological_process No
GO:0008152 metabolic process No
GO:0006396 RNA processing No
GO:0005575 cellular_component No
GO:0009987 cellular process No
GO:1901363 heterocyclic compound binding No
GO:0043170 macromolecule metabolic process No
GO:0000375 RNA splicing, via transesterification reactions No
GO:0008380 RNA splicing No
GO:0046483 heterocycle metabolic process No
GO:0090304 nucleic acid metabolic process No
GO:0044238 primary metabolic process No
GO:0032991 protein-containing complex No
GO:0006807 nitrogen compound metabolic process No
GO:0016070 RNA metabolic process No
GO:0003674 molecular_function No
GO:0140513 nuclear protein-containing complex No
GO:0006397 mRNA processing No
GO:0005488 binding No
GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile No
GO:0071704 organic substance metabolic process No
GO:0003676 nucleic acid binding No
GO:0044237 cellular metabolic process No
GO:0034641 cellular nitrogen compound metabolic process No
GO:1901360 organic cyclic compound metabolic process No
GO:0006725 cellular aromatic compound metabolic process No
GO:1990904 ribonucleoprotein complex No
GO:0006139 nucleobase-containing compound metabolic process No
GO:0016071 mRNA metabolic process No

Deeploc

Deeploc data not available for this genome

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID2
Orthogroup6576
Change Orthofinder run
Species Protein ID
Penicillium roqueforti DTO002I6 Pro_DTO002I6_2|g7216.t1
Penicillium roqueforti DTO003C3 Pro_DTO003C3_2|g8444.t1
Penicillium roqueforti DTO003H1 (CBS 147308) Pro_DTO003H1_2|g8040.t1
Penicillium roqueforti DTO006G1 Pro_DTO006G1_2|g8102.t1
Penicillium roqueforti DTO006G7 Pro_DTO006G7_3|g1010.t1
Penicillium roqueforti DTO012A1 Pro_DTO012A1_2|g7957.t1
Penicillium roqueforti DTO012A2 (CBS 147309) Pro_DTO012A2_2|g9463.t1
Penicillium roqueforti DTO012A6 (CBS 147310) Pro_DTO012A6_2|g8488.t1
Penicillium roqueforti DTO012A7 Pro_DTO012A7_2|g1634.t1
Penicillium roqueforti DTO012A8 Pro_DTO012A8_2|g8172.t1
Penicillium roqueforti DTO012A9 Pro_DTO012A9_2|g8741.t1
Penicillium roqueforti DTO013E5 Pro_DTO013E5_2|g6108.t1
Penicillium roqueforti DTO013F2 Pro_DTO013F2_2|g9101.t1
Penicillium roqueforti DTO013F5 (CBS 147311) Pro_DTO013F5_2|g9589.t1
Penicillium roqueforti DTO027I6 Pro_DTO027I6_2|g5252.t1
Penicillium roqueforti DTO032C6 Pro_DTO032C6_2|g7710.t1
Penicillium roqueforti DTO039G3 Pro_DTO039G3_2|g3284.t1
Penicillium roqueforti DTO046C5 Pro_DTO046C5_2|g8103.t1
Penicillium roqueforti DTO070G2 (CBS 147317) Pro_DTO070G2_2|g7866.t1 (this protein)
Penicillium roqueforti DTO081F9 (CBS 147318) Pro_DTO081F9_2|g6627.t1
Penicillium roqueforti DTO101D6 (CBS 147325) Pro_DTO101D6_2|g9723.t1
Penicillium roqueforti DTO102I9 (CBS 147326) Pro_DTO102I9_2|g6654.t1
Penicillium roqueforti DTO126G2 (CBS 147330) Pro_DTO126G2_2|g2079.t1
Penicillium roqueforti DTO127F7 (CBS 147331) Pro_DTO127F7_2|g7402.t1
Penicillium roqueforti DTO127F9 (CBS 147332) Pro_DTO127F9_2|g9484.t1
Penicillium roqueforti DTO130C1 (CBS 147333) Pro_DTO130C1_2|g7100.t1
Penicillium roqueforti DTO163C3 (CBS 147337) Pro_DTO163C3_2|g6700.t1
Penicillium roqueforti DTO163F5 (CBS 147338) Pro_DTO163F5_2|g9226.t1
Penicillium roqueforti DTO163G4 (CBS 147339) Pro_DTO163G4_2|g9602.t1
Penicillium roqueforti DTO265D5 (CBS 147372) Pro_DTO265D5_2|g9356.t1
Penicillium roqueforti DTO369A1 (CBS 147354) Pro_DTO369A1_2|g7730.t1
Penicillium roqueforti DTO375B1 (CBS 147355) Pro_DTO375B1_2|g2535.t1
Penicillium roqueforti DTO377G2 (LCP 96.3914a) Pro_DTO377G2_2|g8370.t1
Penicillium roqueforti LCP96 04111 Pro_DTO377G3_2|g6498.t1

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO070G2_2|g7866.t1
MLLEDQRFIHEDLERLEQAIADRVAEEPRNARGHLARDHEVSQFLDRIESQSQRLLEIYRDADGLRQKEVQSIST
GDQFEEFYKQLGEIKEHHKRYPNEPTENLEQAYNRRQTGEGEAPRTAIDNMFTGEEGFGQYLDLTTIHEDYLNLP
GVKRLSYVQYLDIFDCFTSPVLPIKRKDKLSDRYFNYVGELASYLESFIKRVQPLQPLNELFASFDDEFEKQWVA
KEVPGWTDEKSANGASGPATEGTGEGIWCADCEKEFKNENVLRSHLTGKKHIRAAEARKAAGASNEKPSASQGTS
SAHSLKEREVARREHQVRSLANVLREQRQATRINVERRQGMTERERQMEWEAVQAGLDHTGPEPRAGEESDEEDE
EVIYNPLKLPLAWDGKPIPFWLYKLHGLGVEYQCEICGNYTYMGRRAFDKHFSENLHVHGLKCLGITSNTNLFRE
ITSINEAMALWDQLEKDRKKDRDSRDNVVQMEDAEGNVMPERIYLDLQKQGIL*
Coding >Pro_DTO070G2_2|g7866.t1
ATGTTGCTCGAAGATCAAAGGTTCATCCACGAGGATCTAGAGCGGCTAGAACAGGCTATCGCTGATCGCGTGGCG
GAAGAGCCCCGAAATGCTCGAGGCCACTTGGCTCGCGACCATGAAGTCTCCCAGTTCCTAGACAGAATTGAGAGT
CAGTCCCAGCGACTCTTAGAGATCTACCGGGACGCCGATGGATTGCGGCAGAAGGAAGTGCAGTCTATCTCGACA
GGCGATCAATTCGAAGAATTTTACAAGCAGCTAGGGGAAATTAAAGAGCACCACAAGCGCTACCCGAACGAACCA
ACCGAGAACCTCGAGCAAGCATATAATCGCCGTCAGACCGGCGAAGGAGAGGCTCCCCGCACCGCAATCGATAAT
ATGTTCACTGGCGAAGAAGGCTTTGGACAGTATCTGGATCTCACAACTATTCACGAAGATTACCTGAATCTTCCC
GGGGTTAAGCGCTTGTCATACGTCCAATACCTCGATATCTTCGACTGCTTCACATCCCCTGTTTTGCCAATTAAG
CGGAAAGACAAGCTCTCTGATCGTTATTTCAACTATGTTGGCGAGCTTGCTAGCTATCTGGAGAGTTTCATCAAG
AGAGTTCAGCCACTGCAACCCTTGAACGAGCTTTTCGCCAGCTTCGACGACGAATTCGAAAAACAATGGGTTGCG
AAGGAGGTTCCCGGTTGGACAGATGAAAAGTCTGCGAATGGTGCGTCTGGCCCAGCTACCGAAGGGACCGGTGAG
GGTATTTGGTGCGCAGATTGCGAGAAGGAATTTAAGAATGAGAACGTCCTCCGGAGCCACTTGACCGGCAAGAAA
CATATTCGGGCGGCAGAAGCCCGCAAAGCAGCAGGCGCATCCAACGAGAAACCATCAGCATCTCAAGGCACATCT
TCGGCCCATAGCCTCAAGGAGCGCGAAGTTGCACGACGCGAACATCAAGTTCGATCCTTGGCGAATGTTCTGCGC
GAGCAGCGACAAGCGACACGAATCAATGTTGAGCGCCGACAGGGTATGACTGAACGTGAACGCCAAATGGAATGG
GAAGCTGTGCAGGCTGGGCTCGATCACACAGGTCCCGAGCCTCGTGCCGGCGAAGAATCAGATGAAGAGGACGAG
GAGGTTATCTACAACCCATTGAAATTGCCACTGGCATGGGATGGAAAACCTATTCCATTCTGGCTCTACAAGCTC
CATGGCCTCGGCGTCGAATATCAGTGCGAGATTTGCGGAAACTACACCTACATGGGTCGACGAGCATTCGACAAA
CACTTCTCTGAAAACCTCCACGTCCACGGATTAAAGTGTCTCGGCATTACCTCCAACACCAATCTCTTCCGTGAG
ATCACCAGTATCAATGAGGCTATGGCGCTTTGGGATCAGCTCGAAAAGGATCGGAAGAAGGACAGAGATTCACGG
GATAATGTCGTTCAGATGGAGGATGCAGAGGGTAACGTTATGCCCGAAAGGATCTACTTGGATTTGCAAAAGCAG
GGTATTCTCTAA
Transcript >Pro_DTO070G2_2|g7866.t1
ATGTTGCTCGAAGATCAAAGGTTCATCCACGAGGATCTAGAGCGGCTAGAACAGGCTATCGCTGATCGCGTGGCG
GAAGAGCCCCGAAATGCTCGAGGCCACTTGGCTCGCGACCATGAAGTCTCCCAGTTCCTAGACAGAATTGAGAGT
CAGTCCCAGCGACTCTTAGAGATCTACCGGGACGCCGATGGATTGCGGCAGAAGGAAGTGCAGTCTATCTCGACA
GGCGATCAATTCGAAGAATTTTACAAGCAGCTAGGGGAAATTAAAGAGCACCACAAGCGCTACCCGAACGAACCA
ACCGAGAACCTCGAGCAAGCATATAATCGCCGTCAGACCGGCGAAGGAGAGGCTCCCCGCACCGCAATCGATAAT
ATGTTCACTGGCGAAGAAGGCTTTGGACAGTATCTGGATCTCACAACTATTCACGAAGATTACCTGAATCTTCCC
GGGGTTAAGCGCTTGTCATACGTCCAATACCTCGATATCTTCGACTGCTTCACATCCCCTGTTTTGCCAATTAAG
CGGAAAGACAAGCTCTCTGATCGTTATTTCAACTATGTTGGCGAGCTTGCTAGCTATCTGGAGAGTTTCATCAAG
AGAGTTCAGCCACTGCAACCCTTGAACGAGCTTTTCGCCAGCTTCGACGACGAATTCGAAAAACAATGGGTTGCG
AAGGAGGTTCCCGGTTGGACAGATGAAAAGTCTGCGAATGGTGCGTCTGGCCCAGCTACCGAAGGGACCGGTGAG
GGTATTTGGTGCGCAGATTGCGAGAAGGAATTTAAGAATGAGAACGTCCTCCGGAGCCACTTGACCGGCAAGAAA
CATATTCGGGCGGCAGAAGCCCGCAAAGCAGCAGGCGCATCCAACGAGAAACCATCAGCATCTCAAGGCACATCT
TCGGCCCATAGCCTCAAGGAGCGCGAAGTTGCACGACGCGAACATCAAGTTCGATCCTTGGCGAATGTTCTGCGC
GAGCAGCGACAAGCGACACGAATCAATGTTGAGCGCCGACAGGGTATGACTGAACGTGAACGCCAAATGGAATGG
GAAGCTGTGCAGGCTGGGCTCGATCACACAGGTCCCGAGCCTCGTGCCGGCGAAGAATCAGATGAAGAGGACGAG
GAGGTTATCTACAACCCATTGAAATTGCCACTGGCATGGGATGGAAAACCTATTCCATTCTGGCTCTACAAGCTC
CATGGCCTCGGCGTCGAATATCAGTGCGAGATTTGCGGAAACTACACCTACATGGGTCGACGAGCATTCGACAAA
CACTTCTCTGAAAACCTCCACGTCCACGGATTAAAGTGTCTCGGCATTACCTCCAACACCAATCTCTTCCGTGAG
ATCACCAGTATCAATGAGGCTATGGCGCTTTGGGATCAGCTCGAAAAGGATCGGAAGAAGGACAGAGATTCACGG
GATAATGTCGTTCAGATGGAGGATGCAGAGGGTAACGTTATGCCCGAAAGGATCTACTTGGATTTGCAAAAGCAG
GGTATTCTCTAA
Gene >Pro_DTO070G2_2|g7866.t1
ATGTTGCTCGAAGATCAAAGGTTCATCCACGAGGATCTAGAGCGGCTAGAACAGGCTATCGCTGATCGCGTGGCG
GAAGAGCCCCGAAATGTGAGTATACCGCCCAAAATTGTCAGTCACACTTTCTCATATACCGATTAATCAGGCTCG
AGGCCACTTGGCTCGCGACCATGAAGTCTCCCAGTTCCTAGACAGAATTGAGAGTCAGTCCCAGCGACTCTTAGA
GATCTACCGGGACGCCGATGGATTGCGGCAGAAGGAAGTGCAGTCTATCTCGACAGGCGATCAATTCGAAGAATT
TTACAAGCAGCTAGGGGAAATTAAAGAGCACCACAAGCGCTACCCGAACGAACCAACCGAGAACCTCGAGCAAGC
ATATAATCGCCGTCAGACCGGCGAAGGAGAGGCTCCCCGCACCGCAATCGATAATATGTTCACTGGCGAAGAAGG
CTTTGGACAGTATCTGGATCTCACAACTATTCACGAAGATTACCTGAATCTTCCCGGGGTTAAGCGCTTGTCATA
CGTCCAATACCTCGATATCTTCGACTGCTTCACATCCCCTGTTTTGCCAATTAAGCGGAAAGACAAGCTCTCTGA
TCGTTATTTCAACTATGTTGGCGAGCTTGCTAGCTATCTGGAGAGTTTCATCAAGAGAGTTCAGCCACTGCAACC
CTTGAACGAGCTTTTCGCCAGCTTCGACGACGAATTCGAAAAACAATGGGTTGCGAAGGAGGTTCCCGGTTGGAC
AGATGAAAAGTCTGCGAATGGTGCGTCTGGCCCAGCTACCGAAGGGACCGGTGAGGGTATTTGGTGCGCAGATTG
CGAGAAGGAATTTAAGAATGAGAACGTCCTCCGGAGCCACTTGACCGGCAAGAAACATATTCGGGCGGCAGAAGC
CCGCAAAGCAGCAGGCGCATCCAACGAGAAACCATCAGCATCTCAAGGCACATCTTCGGCCCATAGCCTCAAGGA
GCGCGAAGTTGCACGACGCGAACATCAAGTTCGATCCTTGGCGAATGTTCTGCGCGAGCAGCGACAAGCGACACG
AATCAATGTTGAGCGCCGACAGGGTATGACTGAACGTGAACGCCAAATGGAATGGGAAGCTGTGCAGGCTGGGCT
CGATCACACAGGTCCCGAGCCTCGTGCCGGCGAAGAATCAGATGAAGAGGACGAGGAGGTTATCTACAACCCATT
GAAATTGCCACTGGCATGGGATGGAAAACCTATTCCATTCTGGCTCTACAAGCTCCATGGCCTCGGCGTCGAATA
TCAGTGCGAGATTTGCGGAAACTACACCTACATGGGTCGACGAGCATTCGACAAACACTTCTCTGAAAACCTCCA
CGTCCACGGATTAAAGTGTCTCGGCATTACCTCCAACACCAATCTCTTCCGTGAGATCACCAGTATCAATGAGGC
TATGGCGCTTTGGGATCAGCTCGAAAAGGATCGGAAGAAGGACAGAGATTCACGGGATAATGTCGTTCAGATGGA
GGATGCAGAGGGTAACGTTATGCCCGAAAGGATCTACTTGGATTTGCAAAAGCAGGGTATTCTCTAA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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