Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO070G2_2|g7475.t1
Gene name
Locationscaffold_13:340566..341403
Strand-
Gene length (bp)837
Transcript length (bp)690
Coding sequence length (bp)690
Protein length (aa) 230

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01105 EMP24_GP25L emp24/gp25L/p24 family/GOLD 1.6E-51 29 223

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 30 0.5

Transmembrane Domains

Domain # Start End Length
1 10 32 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO070G2_2|g7475.t1
MVFSGTSSSWLASALALLSFFSLLLPTNALYFYMEGRQTKCFFEDLPKDTLVAGRFETEVLNPQSGIYAVDHNLK
MHITVEETFDNDHRVVSKRDSHSGRFHFSAADPGQHRICFTPETDASSGWLSNSLGAVKVTVDLAIGETSKIEPE
DKDKIKDIVQRVKDMNSRLHDIRREQVYQRERESEFRDQSETTNSRVVRWTLIQLAVLSAACAWQLSHLRSFFIK
QKLT*
Coding >Pro_DTO070G2_2|g7475.t1
ATGGTTTTCTCTGGGACATCCTCGTCATGGCTGGCGTCAGCTTTGGCTCTCCTATCCTTCTTTTCTCTTCTTCTG
CCGACTAATGCCCTCTACTTCTACATGGAGGGCCGGCAAACAAAGTGCTTCTTCGAGGACCTGCCTAAGGATACT
CTAGTAGCCGGCCGTTTCGAAACTGAAGTCCTGAACCCCCAGAGCGGCATCTACGCCGTCGACCATAACTTGAAG
ATGCACATCACTGTCGAGGAGACCTTCGACAATGACCACCGCGTCGTATCCAAGCGGGATAGCCATTCTGGTCGC
TTCCACTTCTCCGCCGCGGATCCCGGCCAGCACAGAATCTGCTTCACACCTGAAACGGACGCCTCCTCCGGCTGG
TTGTCCAACTCTTTGGGCGCCGTCAAGGTCACTGTCGACCTTGCCATTGGTGAGACCAGCAAGATTGAGCCTGAG
GACAAGGACAAAATCAAGGATATCGTGCAGCGGGTCAAGGATATGAACAGCCGATTGCACGATATCCGTCGTGAG
CAGGTATACCAGCGGGAACGTGAGTCTGAATTCCGTGACCAGTCTGAGACCACCAACTCGCGTGTCGTGCGCTGG
ACTCTTATCCAGCTCGCCGTTTTGTCCGCCGCATGTGCCTGGCAGCTTTCACACCTGCGGTCATTCTTCATCAAG
CAGAAGTTGACTTAG
Transcript >Pro_DTO070G2_2|g7475.t1
ATGGTTTTCTCTGGGACATCCTCGTCATGGCTGGCGTCAGCTTTGGCTCTCCTATCCTTCTTTTCTCTTCTTCTG
CCGACTAATGCCCTCTACTTCTACATGGAGGGCCGGCAAACAAAGTGCTTCTTCGAGGACCTGCCTAAGGATACT
CTAGTAGCCGGCCGTTTCGAAACTGAAGTCCTGAACCCCCAGAGCGGCATCTACGCCGTCGACCATAACTTGAAG
ATGCACATCACTGTCGAGGAGACCTTCGACAATGACCACCGCGTCGTATCCAAGCGGGATAGCCATTCTGGTCGC
TTCCACTTCTCCGCCGCGGATCCCGGCCAGCACAGAATCTGCTTCACACCTGAAACGGACGCCTCCTCCGGCTGG
TTGTCCAACTCTTTGGGCGCCGTCAAGGTCACTGTCGACCTTGCCATTGGTGAGACCAGCAAGATTGAGCCTGAG
GACAAGGACAAAATCAAGGATATCGTGCAGCGGGTCAAGGATATGAACAGCCGATTGCACGATATCCGTCGTGAG
CAGGTATACCAGCGGGAACGTGAGTCTGAATTCCGTGACCAGTCTGAGACCACCAACTCGCGTGTCGTGCGCTGG
ACTCTTATCCAGCTCGCCGTTTTGTCCGCCGCATGTGCCTGGCAGCTTTCACACCTGCGGTCATTCTTCATCAAG
CAGAAGTTGACTTAG
Gene >Pro_DTO070G2_2|g7475.t1
ATGGTTTTCTCTGGGACATCCTCGTCATGGCTGGCGTCAGCTTTGGCTCTCCTATCCTTCTTTTCTCTTCTTCTG
CCGACTAATGCCCTCTACTTCTACATGGAGGGCCGGCAAACAAAGTGCTTCTTCGAGGACCTGCCTAAGGATACT
CTAGTAGCCGGTATGCGCATCTCTAGAGACTTTACAAAGGAATTTGAAACTAACCTATGTTGTTAAATCACAAAT
AGGCCGTTTCGAAACTGAAGTCCTGAACCCCCAGAGCGGCATCTACGCCGTCGACCATAACTTGAAGATGCACAT
CACTGTCGAGGAGACCTTCGACAATGACCACCGCGTCGTATCCAAGCGGGATAGCCATTCTGGTCGCTTCCACTT
CTCCGCCGCGGATCCCGGCCAGCACAGAATCTGCTTCACACCTGAAACGGACGCCTCCTCCGGCTGGTTGTCCAA
CTCTTTGGGCGCCGTCAAGGTCACTGTCGACCTTGCCATTGGTGAGACCAGCAAGATTGAGCCTGAGGACAAGGA
CAAAATCAAGGATATCGTGCAGCGGGTCAAGGATATGAACAGCCGATTGCACGATATCCGTCGTGAGCAGGTATA
CCAGCGGGTAAGGATTTCCCAATCCAATCTATGGCCAGAGTCTCTCTAGGTGATTGGAGTGGTAATACTAATGTT
TTTTCTACCTAGGAACGTGAGTCTGAATTCCGTGACCAGTCTGAGACCACCAACTCGCGTGTCGTGCGCTGGACT
CTTATCCAGCTCGCCGTTTTGTCCGCCGCATGTGCCTGGCAGCTTTCACACCTGCGGTCATTCTTCATCAAGCAG
AAGTTGACTTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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