© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Pro_DTO070G2_2|g7448.t1 |
| Gene name | |
| Location | scaffold_13:268830..270055 |
| Strand | - |
| Gene length (bp) | 1225 |
| Transcript length (bp) | 798 |
| Coding sequence length (bp) | 798 |
| Protein length (aa) | 266 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00160 | Pro_isomerase | Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD | 1.1E-47 | 40 | 194 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0000413 | protein peptidyl-prolyl isomerization | Yes |
| GO:0003755 | peptidyl-prolyl cis-trans isomerase activity | Yes |
| GO:0008150 | biological_process | No |
| GO:0019538 | protein metabolic process | No |
| GO:0044238 | primary metabolic process | No |
| GO:1901564 | organonitrogen compound metabolic process | No |
| GO:0016853 | isomerase activity | No |
| GO:0036211 | protein modification process | No |
| GO:0043412 | macromolecule modification | No |
| GO:0018193 | peptidyl-amino acid modification | No |
| GO:0008152 | metabolic process | No |
| GO:0018208 | peptidyl-proline modification | No |
| GO:0006807 | nitrogen compound metabolic process | No |
| GO:0003674 | molecular_function | No |
| GO:0043170 | macromolecule metabolic process | No |
| GO:0140096 | catalytic activity, acting on a protein | No |
| GO:0071704 | organic substance metabolic process | No |
| GO:0003824 | catalytic activity | No |
| GO:0016859 | cis-trans isomerase activity | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| Yes | 1 - 24 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 7 | 24 | 17 |
| 2 | 228 | 247 | 19 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Pro_DTO070G2_2|g7448.t1 MYFRNLLVSLFFVFAVGFALVQAQEAKEPRGPKITSKVYFDIQHGDEPLGRIVMGLYGKTVPETAENFRALATGE KGFGYQDSTFHRVIKDFMIQGGDFTKGDGTGGKSIYGNKFKDENFKLRHTKKGQLSMANAGKDTNGSQFFITTAI TSWLDGRHVVFGEVLEGYEVVDKIQNVPKGSGDRPKLAVKIVKSGELELEPETEEKELDQEPSVTENAPDAPEAT PSYLLQLVVIFFVLVAAVGIWIARRRGQQQEQEKEKQYDA* |
| Coding | >Pro_DTO070G2_2|g7448.t1 ATGTATTTCCGGAATCTTCTCGTTTCCCTGTTCTTTGTCTTCGCCGTTGGCTTTGCCCTGGTTCAAGCCCAAGAG GCCAAGGAGCCTCGCGGCCCTAAGATTACCAGCAAGGTCTACTTTGACATTCAGCATGGAGACGAACCCCTCGGT CGCATTGTGATGGGCTTGTACGGCAAGACCGTCCCTGAGACCGCTGAGAACTTCCGCGCTTTGGCTACTGGCGAG AAGGGCTTTGGCTACCAGGACTCTACCTTCCACCGTGTTATCAAAGACTTCATGATCCAGGGTGGTGACTTCACC AAGGGCGATGGCACCGGCGGAAAGTCGATCTACGGCAACAAGTTCAAGGATGAGAACTTCAAGCTGCGTCACACC AAGAAGGGCCAGCTGAGCATGGCCAACGCCGGCAAGGACACTAACGGCTCTCAATTCTTCATCACCACCGCTATC ACCTCTTGGCTCGATGGCCGCCATGTCGTCTTCGGCGAGGTCCTTGAGGGCTATGAGGTTGTCGACAAGATCCAA AACGTTCCCAAGGGATCCGGCGACAGGCCCAAGCTAGCGGTCAAGATTGTGAAGAGCGGCGAGCTCGAGCTTGAG CCCGAGACCGAGGAAAAAGAACTCGACCAAGAGCCAAGTGTCACCGAAAATGCTCCCGATGCTCCCGAGGCCACG CCATCTTACTTACTGCAGCTGGTCGTGATTTTCTTCGTTCTGGTAGCCGCTGTGGGTATCTGGATTGCCCGTCGG CGAGGCCAGCAGCAAGAGCAAGAGAAAGAGAAACAGTATGATGCCTAA |
| Transcript | >Pro_DTO070G2_2|g7448.t1 ATGTATTTCCGGAATCTTCTCGTTTCCCTGTTCTTTGTCTTCGCCGTTGGCTTTGCCCTGGTTCAAGCCCAAGAG GCCAAGGAGCCTCGCGGCCCTAAGATTACCAGCAAGGTCTACTTTGACATTCAGCATGGAGACGAACCCCTCGGT CGCATTGTGATGGGCTTGTACGGCAAGACCGTCCCTGAGACCGCTGAGAACTTCCGCGCTTTGGCTACTGGCGAG AAGGGCTTTGGCTACCAGGACTCTACCTTCCACCGTGTTATCAAAGACTTCATGATCCAGGGTGGTGACTTCACC AAGGGCGATGGCACCGGCGGAAAGTCGATCTACGGCAACAAGTTCAAGGATGAGAACTTCAAGCTGCGTCACACC AAGAAGGGCCAGCTGAGCATGGCCAACGCCGGCAAGGACACTAACGGCTCTCAATTCTTCATCACCACCGCTATC ACCTCTTGGCTCGATGGCCGCCATGTCGTCTTCGGCGAGGTCCTTGAGGGCTATGAGGTTGTCGACAAGATCCAA AACGTTCCCAAGGGATCCGGCGACAGGCCCAAGCTAGCGGTCAAGATTGTGAAGAGCGGCGAGCTCGAGCTTGAG CCCGAGACCGAGGAAAAAGAACTCGACCAAGAGCCAAGTGTCACCGAAAATGCTCCCGATGCTCCCGAGGCCACG CCATCTTACTTACTGCAGCTGGTCGTGATTTTCTTCGTTCTGGTAGCCGCTGTGGGTATCTGGATTGCCCGTCGG CGAGGCCAGCAGCAAGAGCAAGAGAAAGAGAAACAGTATGATGCCTAA |
| Gene | >Pro_DTO070G2_2|g7448.t1 ATGTATTTCCGGAATCTTCTCGTTTCCCTGTTCTTTGTCTTCGCCGTTGGCTTTGCCCTGGTTCAAGCCCAAGAG GCCAAGGAGCCTCGCGGCCCTAAGATTACCAGCAAGGTGATTGACATTGATATTCCGACTCGGTCTATATGCAAG CGGTACTGATTGTTGGTGACAGGTCTACTTTGACATTCAGCATGGAGACGAACCCCTCGGTCGCATTGTGATGGG CTTGTACGGCAAGACCGTCCCTGAGGTCTGTAGAACTATACTCTCAGTAACTAATTGATAATTATTGCTGACATT ATTATTTGTATAGACCGCTGAGAACTTCCGGTATGGTGCATTGCTATGTCAATGTCTGCAACGTTTATCCTGCAT ATGCTAACCCATGTCTAGCGCTTTGGCTACTGGCGAGAAGGGCTTTGGCTACCAGGACTCTACCTTCCACCGTGT TATCAAAGACTTCATGATCCAGGGTGGTGACTTCACCAAGGGCGATGGTTTGTGAGCCTCCGAGCAAGTTGATTG CATTATTCTAAGTGTGTACAGGCACCGGCGGAAAGTCGATCTACGGCAACAAGTTCAAGGATGAGAACTTCAAGC TGCGTCACACCAAGAAGGGCCAGCTGAGTAGGCATTTCCACTCATTTGATTCAATCTTACAGACATCTGACCATT CTTAGGCATGGCCAACGCCGGCAAGGACACTAACGGCTCTCAATTCTTCATCACCACCGCTATCACCTCGTTCGT ATCCCTTGCAGTGATTCCTTTGGGGCAATAACTAACGGAAACAACGCAGTTGGCTCGATGGCCGCCATGTCGTCT TCGGCGAGGTCCTTGAGGGCTATGAGGTTGTCGACAAGATCCAAAACGTTCCCAAGGGATCCGGCGACAGGCCCA AGCTAGCGGTCAAGATTGTGAAGAGCGGCGAGCTCGAGCTTGAGCCCGAGACCGAGGAAAAAGGTAGCCGCGATG AGCTCTAGACAGGTGACTGTCTACTTTCTGCTGCTAGTTGGAAGTGGCTGATGATGTTGGAGAACTTTAAGAACT CGACCAAGAGCCAAGTGTCACCGAAAATGCTCCCGATGCTCCCGAGGCCACGCCATCTTACTTACTGCAGCTGGT CGTGATTTTCTTCGTTCTGGTAGCCGCTGTGGGTATCTGGATTGCCCGTCGGCGAGGCCAGCAGCAAGAGCAAGA GAAAGAGAAACAGTATGATGCCTAA |