© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Pro_DTO070G2_2|g7325.t1 |
| Gene name | |
| Location | scaffold_12:531821..532945 |
| Strand | + |
| Gene length (bp) | 1124 |
| Transcript length (bp) | 927 |
| Coding sequence length (bp) | 927 |
| Protein length (aa) | 309 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF05390 | Kre9_KNH1_C | Yeast cell wall synthesis protein KRE9/KNH1 C-terminal | 5.4E-07 | 217 | 294 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0042546 | cell wall biogenesis | Yes |
| GO:0006078 | (1->6)-beta-D-glucan biosynthetic process | Yes |
| GO:0044262 | cellular carbohydrate metabolic process | No |
| GO:0009059 | macromolecule biosynthetic process | No |
| GO:0044238 | primary metabolic process | No |
| GO:1901576 | organic substance biosynthetic process | No |
| GO:0051273 | beta-glucan metabolic process | No |
| GO:0009058 | biosynthetic process | No |
| GO:0071554 | cell wall organization or biogenesis | No |
| GO:0009250 | glucan biosynthetic process | No |
| GO:0009987 | cellular process | No |
| GO:0006073 | cellular glucan metabolic process | No |
| GO:0044264 | cellular polysaccharide metabolic process | No |
| GO:0008152 | metabolic process | No |
| GO:0044085 | cellular component biogenesis | No |
| GO:0000271 | polysaccharide biosynthetic process | No |
| GO:0034637 | cellular carbohydrate biosynthetic process | No |
| GO:0008150 | biological_process | No |
| GO:0043170 | macromolecule metabolic process | No |
| GO:0044249 | cellular biosynthetic process | No |
| GO:0006077 | (1->6)-beta-D-glucan metabolic process | No |
| GO:0033692 | cellular polysaccharide biosynthetic process | No |
| GO:0071840 | cellular component organization or biogenesis | No |
| GO:0034645 | cellular macromolecule biosynthetic process | No |
| GO:0005975 | carbohydrate metabolic process | No |
| GO:0071704 | organic substance metabolic process | No |
| GO:0044260 | cellular macromolecule metabolic process | No |
| GO:0044042 | glucan metabolic process | No |
| GO:0016051 | carbohydrate biosynthetic process | No |
| GO:0044237 | cellular metabolic process | No |
| GO:0005976 | polysaccharide metabolic process | No |
| GO:0051274 | beta-glucan biosynthetic process | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| Yes | 1 - 18 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Pro_DTO070G2_2|g7325.t1 MRVQLLQVALLFTAVYGQISSQITTYDLSFDGAAVVSLLWGLDGEPTSTYNFYLCAGDETTGSYDTLSQVINNGA YAPGDMVSFRVDQSVGGNEPNAYFLKIVLSGPHNYWSGFTSHFTLTNMKGTFSTKVTNAIKTMQPIPAVVISWPT VKDDDHLIEAADLTSICNSSSLAKSSSTEATLQFPTSTAKGEAEHNELRKRQVAAVGGVGDVSVVDQHTVPYGEQ TGSIKYAPMPKSAGTTVATRSATPQYPPFPFSIATSYLGAPTIQYTDTAFATWTANTIENTAAPAPAPTLDKRMQ KWLDRWND* |
| Coding | >Pro_DTO070G2_2|g7325.t1 ATGAGAGTCCAATTACTTCAGGTCGCCCTGTTATTCACGGCCGTCTATGGCCAGATCAGTTCTCAGATCACAACA TATGATCTGAGTTTCGACGGTGCAGCTGTCGTGAGTCTGCTTTGGGGCTTAGATGGCGAACCAACTTCAACTTAT AATTTTTATCTCTGTGCCGGTGATGAGACAACAGGTTCATATGACACTCTATCGCAAGTTATCAACAATGGCGCC TATGCTCCTGGTGACATGGTGTCATTTCGTGTCGATCAAAGTGTCGGTGGGAATGAACCCAATGCATACTTTCTC AAGATAGTCCTATCAGGCCCTCATAACTACTGGTCCGGGTTCACCTCTCATTTCACTTTGACCAACATGAAAGGT ACATTCTCGACCAAAGTAACAAATGCGATCAAGACGATGCAGCCGATTCCCGCCGTCGTTATTTCCTGGCCTACA GTCAAAGACGATGACCACCTCATCGAGGCCGCAGATCTCACTTCAATTTGCAACTCCTCTAGTCTCGCCAAGAGT TCCTCAACCGAAGCCACCTTGCAGTTCCCAACCTCAACCGCCAAGGGCGAAGCCGAGCACAATGAATTGCGCAAA CGACAAGTGGCTGCTGTCGGCGGCGTTGGCGATGTTTCTGTAGTTGACCAGCATACCGTCCCATACGGTGAACAG ACTGGCTCGATCAAATATGCCCCGATGCCTAAGAGCGCTGGGACTACTGTCGCCACCAGATCAGCCACTCCTCAA TACCCGCCTTTCCCGTTCTCTATTGCAACCAGCTACTTAGGTGCGCCAACCATCCAGTACACGGATACAGCTTTT GCGACATGGACGGCGAACACCATCGAGAACACGGCTGCGCCCGCTCCTGCGCCCACATTGGACAAGAGAATGCAG AAGTGGTTGGACCGTTGGAATGATTGA |
| Transcript | >Pro_DTO070G2_2|g7325.t1 ATGAGAGTCCAATTACTTCAGGTCGCCCTGTTATTCACGGCCGTCTATGGCCAGATCAGTTCTCAGATCACAACA TATGATCTGAGTTTCGACGGTGCAGCTGTCGTGAGTCTGCTTTGGGGCTTAGATGGCGAACCAACTTCAACTTAT AATTTTTATCTCTGTGCCGGTGATGAGACAACAGGTTCATATGACACTCTATCGCAAGTTATCAACAATGGCGCC TATGCTCCTGGTGACATGGTGTCATTTCGTGTCGATCAAAGTGTCGGTGGGAATGAACCCAATGCATACTTTCTC AAGATAGTCCTATCAGGCCCTCATAACTACTGGTCCGGGTTCACCTCTCATTTCACTTTGACCAACATGAAAGGT ACATTCTCGACCAAAGTAACAAATGCGATCAAGACGATGCAGCCGATTCCCGCCGTCGTTATTTCCTGGCCTACA GTCAAAGACGATGACCACCTCATCGAGGCCGCAGATCTCACTTCAATTTGCAACTCCTCTAGTCTCGCCAAGAGT TCCTCAACCGAAGCCACCTTGCAGTTCCCAACCTCAACCGCCAAGGGCGAAGCCGAGCACAATGAATTGCGCAAA CGACAAGTGGCTGCTGTCGGCGGCGTTGGCGATGTTTCTGTAGTTGACCAGCATACCGTCCCATACGGTGAACAG ACTGGCTCGATCAAATATGCCCCGATGCCTAAGAGCGCTGGGACTACTGTCGCCACCAGATCAGCCACTCCTCAA TACCCGCCTTTCCCGTTCTCTATTGCAACCAGCTACTTAGGTGCGCCAACCATCCAGTACACGGATACAGCTTTT GCGACATGGACGGCGAACACCATCGAGAACACGGCTGCGCCCGCTCCTGCGCCCACATTGGACAAGAGAATGCAG AAGTGGTTGGACCGTTGGAATGATTGA |
| Gene | >Pro_DTO070G2_2|g7325.t1 ATGAGAGTCCAATTACTTCAGGTCGCCCTGTTATTCACGGCCGTCTATGGCCAGATCAGTTCTCAGATCACAACA TATGATCTGAGTTTCGACGGTGCAGCTGTCGTGAGTCTGCTTTGGGGCTTAGATGGCGAACCAACTTCAACTTAT AATTTTTATCTCTGTGCCGGTGATGAGACAACAGGTTCATATGTATGTTTCTCTCTATACGGAACTGCAAAACAT AGAGCTAACCACACATCTAGGACACTCTATCGCAAGTTATCAACAATGGCGCCTATGCTCCTGGTGACATGGTGT CATTTCGTGTCGATCAAAGTGTCGGTGGGAATGAACCCAATGCATAGTAAGACAATTCATTTGCCTCTGACATCG GCGGCTTCATCAATTCGCTTTGTGACTGACCAATGTCCCTGGGGCCCAATCAGCTTTCTCAAGATAGTCCTATCA GGCCCTCATAACTACTGGTCCGGGTTCACCTCTCATTTCACTTTGACCAACATGAAAGGTACATTCTCGACCAAA GTAACAAATGCGATCAAGACGATGCAGCCGATTCCCGCCGTCGTTATTTCCTGGCCTACAGTCAAAGACGATGAC CACCTCATCGAGGCCGCAGATCTCACTTCAATTTGCAACTCCTCTAGTCTCGCCAAGAGTTCCTCAACCGAAGCC ACCTTGCAGTTCCCAACCTCAACCGCCAAGGGCGAAGCCGAGCACAATGAATTGCGCAAACGACAAGTGGCTGCT GTCGGCGGCGTTGGCGATGTTTCTGTAGTTGACCAGCATACCGTCCCATACGGTGAACAGACTGGCTCGATCAAA TATGCCCCGATGCCTAAGAGCGCTGGGACTACTGTCGCCACCAGATCAGCCACTCCTCAATACCCGCCTTTCCCG TTCTCTATTGCAACCAGCTACTTAGGTGCGCCAACCATCCAGTACACGGATACAGCTTTTGCGACATGGACGGCG AACACCATCGAGAACACGGTGAGTTTGATTCTTGCTTGTTGTCGATTGGGTTTGAAAGCTAATCCTCCGTTTGTG TTCAGGCTGCGCCCGCTCCTGCGCCCACATTGGACAAGAGAATGCAGAAGTGGTTGGACCGTTGGAATGATTGA |