© 2022 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | Pro_DTO070G2_2|g6809.t1 |
| Gene name | |
| Location | scaffold_10:547781..548993 |
| Strand | + |
| Gene length (bp) | 1212 |
| Transcript length (bp) | 1212 |
| Coding sequence length (bp) | 1212 |
| Protein length (aa) | 404 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF01494 | FAD_binding_3 | FAD binding domain | 4.3E-13 | 156 | 379 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0071949 | FAD binding | Yes |
| GO:0005488 | binding | No |
| GO:0036094 | small molecule binding | No |
| GO:0043167 | ion binding | No |
| GO:0043168 | anion binding | No |
| GO:1901265 | nucleoside phosphate binding | No |
| GO:1901363 | heterocyclic compound binding | No |
| GO:0097159 | organic cyclic compound binding | No |
| GO:0050660 | flavin adenine dinucleotide binding | No |
| GO:0003674 | molecular_function | No |
| GO:0000166 | nucleotide binding | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| Yes | 1 - 19 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Pro_DTO070G2_2|g6809.t1 MSHPILIIGAGLGGLCLAQGLKKRNIPFKLFEQDGRHDLRTQGYRLRVGSEGIYALRDNLSPELYALFENTCAET VMGGVRIKPDGTLLGGTGPPRPLGSAAFIEPQTVDRSTFREVLLTGLDEHVFFGKSFDHYTVNDGNTIAFFADGS KETGSLLVGADGVRSRVRKQYIPDFMGIDTGMRIIFGKTPLSPEFLARFPEAYHHGMSLVLNPDDESRTTLLFES IRFPHAEKVSKPQLPDPYVYWVLVTHSSNISSSNGTSWPLSPEKSAELARHVTKSWHPDLQVLFEMQDEAQTSTR LMLSASPELASWEPSPHVTLLGDAIHPMPPTGAMGANTALRDAADLARRLEVAVSSQTLGRHVIGEYESELRDSA RTAIALSWQGGMKGFRLKSAVECKKILL* |
| Coding | >Pro_DTO070G2_2|g6809.t1 ATGTCTCATCCTATCTTGATTATCGGTGCTGGGCTTGGCGGTCTTTGCTTGGCTCAGGGACTGAAAAAACGAAAC ATTCCTTTCAAACTATTTGAACAGGACGGAAGGCATGATCTTCGAACTCAGGGATATAGATTGAGGGTGGGAAGT GAGGGTATCTACGCCCTTCGGGATAATCTGTCGCCTGAGCTATATGCTCTGTTCGAGAACACCTGTGCCGAAACG GTAATGGGGGGCGTGAGAATCAAACCCGATGGTACACTACTAGGCGGCACTGGCCCTCCTAGGCCCCTTGGGTCG GCTGCTTTTATCGAGCCCCAGACTGTGGATCGGAGCACTTTCCGTGAGGTTCTGCTGACAGGTTTGGATGAGCAT GTGTTTTTTGGAAAGAGCTTCGACCATTACACTGTGAACGACGGAAACACAATTGCATTCTTTGCGGATGGCTCG AAGGAAACTGGATCTCTCCTTGTTGGTGCAGATGGAGTTCGATCTAGGGTCCGCAAGCAGTACATACCAGATTTC ATGGGTATCGACACCGGCATGCGCATCATCTTTGGAAAGACACCCTTGAGCCCCGAATTTCTGGCTCGGTTTCCC GAGGCGTACCACCATGGAATGTCTCTTGTTTTAAACCCAGACGATGAATCACGGACCACCTTGCTATTTGAATCC ATCCGTTTCCCACACGCAGAAAAAGTCTCGAAACCTCAGCTTCCCGACCCATACGTGTATTGGGTGCTTGTCACT CATTCCTCCAATATCTCGTCGTCAAATGGCACATCCTGGCCATTAAGCCCGGAAAAGTCAGCGGAACTTGCTCGA CATGTTACCAAGTCATGGCATCCTGACTTGCAGGTGCTTTTCGAGATGCAAGACGAGGCTCAAACTTCAACCCGA TTGATGCTTTCTGCCTCACCAGAGTTGGCCTCCTGGGAGCCCTCGCCCCATGTGACTTTACTCGGCGACGCGATT CATCCCATGCCACCAACTGGAGCGATGGGGGCCAACACTGCCTTGCGTGACGCTGCAGATCTGGCTCGCAGGCTT GAGGTTGCAGTAAGTTCGCAAACCCTCGGTCGACATGTCATCGGGGAGTATGAATCGGAGCTACGGGATTCGGCT AGAACGGCAATCGCATTAAGCTGGCAAGGTGGCATGAAAGGCTTCAGGCTCAAATCAGCCGTGGAATGCAAGAAG ATCCTCTTATGA |
| Transcript | >Pro_DTO070G2_2|g6809.t1 ATGTCTCATCCTATCTTGATTATCGGTGCTGGGCTTGGCGGTCTTTGCTTGGCTCAGGGACTGAAAAAACGAAAC ATTCCTTTCAAACTATTTGAACAGGACGGAAGGCATGATCTTCGAACTCAGGGATATAGATTGAGGGTGGGAAGT GAGGGTATCTACGCCCTTCGGGATAATCTGTCGCCTGAGCTATATGCTCTGTTCGAGAACACCTGTGCCGAAACG GTAATGGGGGGCGTGAGAATCAAACCCGATGGTACACTACTAGGCGGCACTGGCCCTCCTAGGCCCCTTGGGTCG GCTGCTTTTATCGAGCCCCAGACTGTGGATCGGAGCACTTTCCGTGAGGTTCTGCTGACAGGTTTGGATGAGCAT GTGTTTTTTGGAAAGAGCTTCGACCATTACACTGTGAACGACGGAAACACAATTGCATTCTTTGCGGATGGCTCG AAGGAAACTGGATCTCTCCTTGTTGGTGCAGATGGAGTTCGATCTAGGGTCCGCAAGCAGTACATACCAGATTTC ATGGGTATCGACACCGGCATGCGCATCATCTTTGGAAAGACACCCTTGAGCCCCGAATTTCTGGCTCGGTTTCCC GAGGCGTACCACCATGGAATGTCTCTTGTTTTAAACCCAGACGATGAATCACGGACCACCTTGCTATTTGAATCC ATCCGTTTCCCACACGCAGAAAAAGTCTCGAAACCTCAGCTTCCCGACCCATACGTGTATTGGGTGCTTGTCACT CATTCCTCCAATATCTCGTCGTCAAATGGCACATCCTGGCCATTAAGCCCGGAAAAGTCAGCGGAACTTGCTCGA CATGTTACCAAGTCATGGCATCCTGACTTGCAGGTGCTTTTCGAGATGCAAGACGAGGCTCAAACTTCAACCCGA TTGATGCTTTCTGCCTCACCAGAGTTGGCCTCCTGGGAGCCCTCGCCCCATGTGACTTTACTCGGCGACGCGATT CATCCCATGCCACCAACTGGAGCGATGGGGGCCAACACTGCCTTGCGTGACGCTGCAGATCTGGCTCGCAGGCTT GAGGTTGCAGTAAGTTCGCAAACCCTCGGTCGACATGTCATCGGGGAGTATGAATCGGAGCTACGGGATTCGGCT AGAACGGCAATCGCATTAAGCTGGCAAGGTGGCATGAAAGGCTTCAGGCTCAAATCAGCCGTGGAATGCAAGAAG ATCCTCTTATGA |
| Gene | >Pro_DTO070G2_2|g6809.t1 ATGTCTCATCCTATCTTGATTATCGGTGCTGGGCTTGGCGGTCTTTGCTTGGCTCAGGGACTGAAAAAACGAAAC ATTCCTTTCAAACTATTTGAACAGGACGGAAGGCATGATCTTCGAACTCAGGGATATAGATTGAGGGTGGGAAGT GAGGGTATCTACGCCCTTCGGGATAATCTGTCGCCTGAGCTATATGCTCTGTTCGAGAACACCTGTGCCGAAACG GTAATGGGGGGCGTGAGAATCAAACCCGATGGTACACTACTAGGCGGCACTGGCCCTCCTAGGCCCCTTGGGTCG GCTGCTTTTATCGAGCCCCAGACTGTGGATCGGAGCACTTTCCGTGAGGTTCTGCTGACAGGTTTGGATGAGCAT GTGTTTTTTGGAAAGAGCTTCGACCATTACACTGTGAACGACGGAAACACAATTGCATTCTTTGCGGATGGCTCG AAGGAAACTGGATCTCTCCTTGTTGGTGCAGATGGAGTTCGATCTAGGGTCCGCAAGCAGTACATACCAGATTTC ATGGGTATCGACACCGGCATGCGCATCATCTTTGGAAAGACACCCTTGAGCCCCGAATTTCTGGCTCGGTTTCCC GAGGCGTACCACCATGGAATGTCTCTTGTTTTAAACCCAGACGATGAATCACGGACCACCTTGCTATTTGAATCC ATCCGTTTCCCACACGCAGAAAAAGTCTCGAAACCTCAGCTTCCCGACCCATACGTGTATTGGGTGCTTGTCACT CATTCCTCCAATATCTCGTCGTCAAATGGCACATCCTGGCCATTAAGCCCGGAAAAGTCAGCGGAACTTGCTCGA CATGTTACCAAGTCATGGCATCCTGACTTGCAGGTGCTTTTCGAGATGCAAGACGAGGCTCAAACTTCAACCCGA TTGATGCTTTCTGCCTCACCAGAGTTGGCCTCCTGGGAGCCCTCGCCCCATGTGACTTTACTCGGCGACGCGATT CATCCCATGCCACCAACTGGAGCGATGGGGGCCAACACTGCCTTGCGTGACGCTGCAGATCTGGCTCGCAGGCTT GAGGTTGCAGTAAGTTCGCAAACCCTCGGTCGACATGTCATCGGGGAGTATGAATCGGAGCTACGGGATTCGGCT AGAACGGCAATCGCATTAAGCTGGCAAGGTGGCATGAAAGGCTTCAGGCTCAAATCAGCCGTGGAATGCAAGAAG ATCCTCTTATGA |