© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Pro_DTO070G2_2|g6672.t1 |
| Gene name | |
| Location | scaffold_10:210388..211340 |
| Strand | - |
| Gene length (bp) | 952 |
| Transcript length (bp) | 771 |
| Coding sequence length (bp) | 771 |
| Protein length (aa) | 257 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00106 | adh_short | short chain dehydrogenase | 1.2E-47 | 8 | 193 |
| PF13561 | adh_short_C2 | Enoyl-(Acyl carrier protein) reductase | 9.6E-47 | 13 | 251 |
| PF08659 | KR | KR domain | 1.1E-05 | 9 | 154 |
| PF01370 | Epimerase | NAD dependent epimerase/dehydratase family | 1.4E-04 | 9 | 105 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 24 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 7 | 29 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Pro_DTO070G2_2|g6672.t1 MSLLQDIVVIITGSASGIGLATATAALSQGARILGVDVSSAPVSLNEHPNYKFMQGDLTHETTPRQVVETCIKEF GGRIDGLLNIAGIMDQNSSVDSLSDYMWERCIAVNLTAPVKLMREVIPIMRQQQSGSIVNVGSKAATSGASSGVA YTASKHGLMGATKNVAWRYKQEGIRCNAVCPGGVPTGIVQASDPSTWDKDALGTMSLIHQAHAADRQKGLGVEAE DIADCLLFLISSQSKRINGAIIPIDNAWSVI* |
| Coding | >Pro_DTO070G2_2|g6672.t1 ATGTCGCTGCTTCAAGACATTGTTGTGATAATCACCGGTAGCGCCTCTGGAATTGGACTGGCAACAGCCACAGCA GCTCTAAGCCAAGGGGCGAGAATTCTAGGTGTTGATGTCTCATCAGCACCTGTCTCACTCAATGAACATCCAAAT TACAAATTCATGCAAGGTGATCTCACCCATGAGACGACACCAAGGCAGGTGGTAGAGACCTGTATCAAAGAGTTT GGTGGACGAATCGATGGTCTGCTCAACATTGCTGGTATCATGGACCAGAATTCCAGCGTTGATAGTCTCTCAGAT TATATGTGGGAACGATGCATTGCAGTCAATTTGACAGCTCCAGTGAAGCTCATGCGTGAGGTTATTCCTATTATG CGACAGCAACAGAGTGGTAGTATTGTCAACGTCGGCAGCAAGGCAGCTACGAGTGGTGCTTCGTCCGGCGTTGCT TACACAGCTAGTAAACATGGGCTGATGGGCGCAACCAAAAATGTTGCATGGAGGTACAAACAAGAGGGAATTCGC TGCAATGCCGTTTGTCCCGGGGGAGTTCCAACCGGTATAGTACAGGCCTCTGACCCAAGCACTTGGGACAAGGAT GCACTAGGAACAATGTCTCTAATTCACCAGGCACATGCTGCTGATAGGCAGAAAGGACTGGGGGTTGAGGCTGAG GATATTGCCGACTGTCTTCTATTCCTGATCTCTAGTCAGAGCAAGAGAATTAACGGGGCAATCATTCCCATCGAC AACGCCTGGTCTGTGATCTAA |
| Transcript | >Pro_DTO070G2_2|g6672.t1 ATGTCGCTGCTTCAAGACATTGTTGTGATAATCACCGGTAGCGCCTCTGGAATTGGACTGGCAACAGCCACAGCA GCTCTAAGCCAAGGGGCGAGAATTCTAGGTGTTGATGTCTCATCAGCACCTGTCTCACTCAATGAACATCCAAAT TACAAATTCATGCAAGGTGATCTCACCCATGAGACGACACCAAGGCAGGTGGTAGAGACCTGTATCAAAGAGTTT GGTGGACGAATCGATGGTCTGCTCAACATTGCTGGTATCATGGACCAGAATTCCAGCGTTGATAGTCTCTCAGAT TATATGTGGGAACGATGCATTGCAGTCAATTTGACAGCTCCAGTGAAGCTCATGCGTGAGGTTATTCCTATTATG CGACAGCAACAGAGTGGTAGTATTGTCAACGTCGGCAGCAAGGCAGCTACGAGTGGTGCTTCGTCCGGCGTTGCT TACACAGCTAGTAAACATGGGCTGATGGGCGCAACCAAAAATGTTGCATGGAGGTACAAACAAGAGGGAATTCGC TGCAATGCCGTTTGTCCCGGGGGAGTTCCAACCGGTATAGTACAGGCCTCTGACCCAAGCACTTGGGACAAGGAT GCACTAGGAACAATGTCTCTAATTCACCAGGCACATGCTGCTGATAGGCAGAAAGGACTGGGGGTTGAGGCTGAG GATATTGCCGACTGTCTTCTATTCCTGATCTCTAGTCAGAGCAAGAGAATTAACGGGGCAATCATTCCCATCGAC AACGCCTGGTCTGTGATCTAA |
| Gene | >Pro_DTO070G2_2|g6672.t1 ATGTCGCTGCTTCAAGACATTGTAATGCCCCAGCTGCTAACATCTCTCATCGTCCAAATTTCTTACTAATTGCGT TCTAGGTTGTGATAATCACCGGTAGCGCCTCTGGAATTGGACTGGCAACAGCCACAGCAGCTCTAAGCCAAGGGG CGAGAATTCTAGGTGTTGATGTCTCATCAGCACCTGTCTCACTCAATGAACATCCAAATTACAAATTCATGCAAG GTGATCTCACCCATGAGACGACACCAAGGCAGGTGGTAGAGACCTGTATCAAAGAGTTTGGTGGACGAATCGATG GTCTGCTCAACATTGCTGGTATCATGGACCAGAATTCCAGCGTTGATAGTCTCTCAGATTATATGTGGGAACGAT GCATTGCAGTCAATTTGACAGCTCCAGTGAAGCTCATGCGTGAGGTTATTCCTATTATGCGACAGCAACAGAGTG GTAGTATTGTCAACGTCGGCAGCAAGGCAGCTACGAGTGGTGCTTCGTCCGGCGTTGCTTACACAGCTAGTGAGT ATATCCATATGAATCGAGGTATGCATCAGCATAGTGACAGACCTACTTTCCAGGTAAACATGGGCTGATGGGCGC AACCAAAAATGTTGCATGGAGGTACAAACAAGAGGGAATTCGCTGCAATGCCGTTTGTCCCGGGGGTACGTGGAC CAACATATGCTATTAAGATCAAATTTGTGTTAGAAGCTTATGATTTACACTAGGAGTTCCAACCGGTATAGTACA GGCCTCTGACCCAAGCACTTGGGACAAGGATGCACTAGGAACAATGTCTCTAATTCACCAGGCACATGCTGCTGA TAGGCAGAAAGGACTGGGGGTTGAGGCTGAGGATATTGCCGACTGTCTTCTATTCCTGATCTCTAGTCAGAGCAA GAGAATTAACGGGGCAATCATTCCCATCGACAACGCCTGGTCTGTGATCTAA |