Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO070G2_2|g6522.t1
Gene name
Locationscaffold_09:710557..712851
Strand+
Gene length (bp)2294
Transcript length (bp)1542
Coding sequence length (bp)1542
Protein length (aa) 514

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00098 zf-CCHC Zinc knuckle 1.5E-06 67 84
PF00098 zf-CCHC Zinc knuckle 9.6E-05 90 106
PF00098 zf-CCHC Zinc knuckle 4.1E-06 112 128
PF00098 zf-CCHC Zinc knuckle 1.3E-04 304 320
PF00098 zf-CCHC Zinc knuckle 1.6E-03 331 348
PF00098 zf-CCHC Zinc knuckle 2.8E-05 355 371
PF00098 zf-CCHC Zinc knuckle 1.9E-06 379 394
PF00098 zf-CCHC Zinc knuckle 1.9E-06 402 419
PF00098 zf-CCHC Zinc knuckle 8.7E-06 427 443
PF14392 zf-CCHC_4 Zinc knuckle 8.0E-02 67 83
PF14392 zf-CCHC_4 Zinc knuckle 3.2E-01 89 105
PF14392 zf-CCHC_4 Zinc knuckle 6.4E-02 111 128
PF14392 zf-CCHC_4 Zinc knuckle 1.8E-01 298 319
PF14392 zf-CCHC_4 Zinc knuckle 8.3E+00 328 347
PF14392 zf-CCHC_4 Zinc knuckle 3.3E+00 452 466

GO

GO Term Description Terminal node
GO:0008270 zinc ion binding Yes
GO:0003676 nucleic acid binding Yes
GO:0005488 binding No
GO:0043169 cation binding No
GO:1901363 heterocyclic compound binding No
GO:0046914 transition metal ion binding No
GO:0043167 ion binding No
GO:0046872 metal ion binding No
GO:0097159 organic cyclic compound binding No
GO:0003674 molecular_function No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 38 0.45

Transmembrane Domains

(None)

Transcription Factor Class

Transcription Factor Class
(based on PFAM domains)
Zinc finger, CCHC-type

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO070G2_2|g6522.t1
METNIHEDRNEDFTCGQCGGSGHMTRQCPNASLPLRQRDSNAGDAYGNYGNDNGGGHGDYSGGGGDRACYNCGQE
GHSKADCTEPRKMGACFNCGQDGHSKAECTEPRKMGACFNCGEEGHSKSECPKPRVFRGTCRICEKEGHPAVDCP
ERPPDVCKNCQAQGHKTMECKENRKFDLNLVADMLPQEGWAAMKKASDERDLDDFREALKIYSKAVPNATWADIE
KKMREDNFNIYIIAMEAEVDDVMSLIDLQGVLDREYVIGFFFNPKASRGHLRDRWPADAEENLERMKSAGIPYER
KVPKCLNCGELGHISRSCKEERAEGNDRVEIKCSNCEGAGHRVRDCRQQRKHKHGCRNCGSIEHIASDCTEPRSA
AGVECRRCNETGHFAKDCPTVADRGPRTCRNCGSEDHIARDCDQPRDVSTVTCRNCEKTGHYSRDCDQPKDWSKV
QCKNCGEMGHTVVRCRQPPKEEEPQDEPTFSPGSPKREEPDPLNSEATDQQFEYKRHDDEDLW*
Coding >Pro_DTO070G2_2|g6522.t1
ATGGAGACAAATATCCATGAAGACCGGAATGAAGATTTTACCTGCGGACAATGCGGTGGATCTGGCCATATGACT
CGTCAGTGCCCGAATGCCTCTCTTCCTCTGAGACAGAGAGACAGCAATGCAGGTGATGCCTATGGCAACTACGGC
AACGACAATGGTGGAGGACATGGTGATTACTCCGGTGGTGGCGGTGACCGCGCTTGCTACAACTGCGGCCAAGAA
GGCCATAGCAAAGCCGACTGTACCGAGCCTCGCAAGATGGGGGCATGCTTCAACTGTGGCCAGGACGGTCACTCC
AAGGCCGAATGCACCGAGCCTCGCAAGATGGGCGCTTGCTTCAACTGTGGCGAAGAAGGTCACTCCAAGTCCGAA
TGTCCTAAGCCTCGCGTGTTCAGGGGTACCTGCCGTATCTGCGAAAAGGAAGGCCACCCAGCGGTTGATTGTCCT
GAGAGACCCCCCGATGTTTGCAAGAACTGCCAGGCCCAAGGCCACAAGACGATGGAGTGCAAGGAGAATCGCAAG
TTCGATCTCAACCTTGTTGCTGACATGCTACCCCAAGAAGGTTGGGCTGCAATGAAGAAAGCCAGTGACGAAAGG
GATCTTGATGATTTCCGAGAGGCACTTAAAATCTACTCCAAGGCAGTCCCCAATGCCACCTGGGCAGACATTGAG
AAGAAGATGCGAGAGGATAATTTCAACATCTACATCATTGCTATGGAGGCTGAAGTTGACGATGTCATGAGCCTT
ATCGATCTTCAGGGAGTACTTGACCGTGAGTACGTGATTGGATTCTTTTTCAACCCCAAGGCGTCGCGTGGCCAC
CTCCGAGATCGTTGGCCTGCAGATGCCGAGGAGAACCTAGAGCGCATGAAGAGCGCCGGTATTCCCTACGAGCGC
AAGGTGCCTAAGTGCCTGAACTGTGGAGAGTTGGGACATATCTCCCGCAGTTGCAAGGAGGAGCGCGCCGAGGGC
AATGATCGTGTGGAAATCAAGTGCTCAAACTGTGAGGGAGCTGGACACCGCGTACGCGATTGCAGACAGCAGCGC
AAGCACAAGCATGGTTGCCGTAACTGCGGATCTATTGAGCATATTGCTTCTGACTGCACCGAGCCCCGATCTGCG
GCTGGTGTTGAATGCCGGAGATGCAACGAAACTGGCCACTTTGCCAAAGATTGCCCCACTGTTGCTGACCGTGGC
CCTCGCACCTGCCGCAATTGCGGATCCGAAGACCACATCGCTCGCGATTGTGATCAACCTCGTGACGTTTCCACT
GTTACCTGCCGCAACTGCGAAAAGACCGGACATTACTCTCGTGATTGTGATCAGCCGAAAGATTGGTCGAAGGTT
CAGTGCAAGAACTGCGGAGAAATGGGTCACACTGTTGTCCGTTGCCGCCAGCCGCCTAAGGAGGAAGAGCCTCAA
GACGAACCTACTTTCTCCCCCGGCTCTCCCAAGCGCGAGGAACCTGATCCGCTGAACTCAGAGGCTACTGACCAA
CAGTTTGAATACAAGCGCCATGACGACGAGGACCTCTGGTAA
Transcript >Pro_DTO070G2_2|g6522.t1
ATGGAGACAAATATCCATGAAGACCGGAATGAAGATTTTACCTGCGGACAATGCGGTGGATCTGGCCATATGACT
CGTCAGTGCCCGAATGCCTCTCTTCCTCTGAGACAGAGAGACAGCAATGCAGGTGATGCCTATGGCAACTACGGC
AACGACAATGGTGGAGGACATGGTGATTACTCCGGTGGTGGCGGTGACCGCGCTTGCTACAACTGCGGCCAAGAA
GGCCATAGCAAAGCCGACTGTACCGAGCCTCGCAAGATGGGGGCATGCTTCAACTGTGGCCAGGACGGTCACTCC
AAGGCCGAATGCACCGAGCCTCGCAAGATGGGCGCTTGCTTCAACTGTGGCGAAGAAGGTCACTCCAAGTCCGAA
TGTCCTAAGCCTCGCGTGTTCAGGGGTACCTGCCGTATCTGCGAAAAGGAAGGCCACCCAGCGGTTGATTGTCCT
GAGAGACCCCCCGATGTTTGCAAGAACTGCCAGGCCCAAGGCCACAAGACGATGGAGTGCAAGGAGAATCGCAAG
TTCGATCTCAACCTTGTTGCTGACATGCTACCCCAAGAAGGTTGGGCTGCAATGAAGAAAGCCAGTGACGAAAGG
GATCTTGATGATTTCCGAGAGGCACTTAAAATCTACTCCAAGGCAGTCCCCAATGCCACCTGGGCAGACATTGAG
AAGAAGATGCGAGAGGATAATTTCAACATCTACATCATTGCTATGGAGGCTGAAGTTGACGATGTCATGAGCCTT
ATCGATCTTCAGGGAGTACTTGACCGTGAGTACGTGATTGGATTCTTTTTCAACCCCAAGGCGTCGCGTGGCCAC
CTCCGAGATCGTTGGCCTGCAGATGCCGAGGAGAACCTAGAGCGCATGAAGAGCGCCGGTATTCCCTACGAGCGC
AAGGTGCCTAAGTGCCTGAACTGTGGAGAGTTGGGACATATCTCCCGCAGTTGCAAGGAGGAGCGCGCCGAGGGC
AATGATCGTGTGGAAATCAAGTGCTCAAACTGTGAGGGAGCTGGACACCGCGTACGCGATTGCAGACAGCAGCGC
AAGCACAAGCATGGTTGCCGTAACTGCGGATCTATTGAGCATATTGCTTCTGACTGCACCGAGCCCCGATCTGCG
GCTGGTGTTGAATGCCGGAGATGCAACGAAACTGGCCACTTTGCCAAAGATTGCCCCACTGTTGCTGACCGTGGC
CCTCGCACCTGCCGCAATTGCGGATCCGAAGACCACATCGCTCGCGATTGTGATCAACCTCGTGACGTTTCCACT
GTTACCTGCCGCAACTGCGAAAAGACCGGACATTACTCTCGTGATTGTGATCAGCCGAAAGATTGGTCGAAGGTT
CAGTGCAAGAACTGCGGAGAAATGGGTCACACTGTTGTCCGTTGCCGCCAGCCGCCTAAGGAGGAAGAGCCTCAA
GACGAACCTACTTTCTCCCCCGGCTCTCCCAAGCGCGAGGAACCTGATCCGCTGAACTCAGAGGCTACTGACCAA
CAGTTTGAATACAAGCGCCATGACGACGAGGACCTCTGGTAA
Gene >Pro_DTO070G2_2|g6522.t1
ATGGAGACAAATATCCATGAAGACCGGAATGAAGATTTTACCTGCGGACAGTGAGTTCTCCCCTCCAAAATTCTA
GCTTTCAAGGCTTAGGATATCCCCCCGAGAAAATCAGTCACTTAAAATTCTAGATGCGGTGGATCTGGCCATATG
ACTCGTCAGTGCCCGAATGCCTCTCTTCCTCTGAGACAGAGAGACAGCAATGCAGGGTAAGTTGGTCCTACACTT
TCCATGTCACATTCTGCCAGTCCATCTAACCAATGCTAAAATATAGTGATGCCTATGGCAACTACGGCAACGACA
ATGGTGGAGGACATGGTGATTACTCCGGTGGTGGCGGTGACCGCGCTTGCTACAACTGCGGCCAAGAAGGGTAAG
TCGTTGATATCTGTGTACTTGCCAAATTTTACTGACAACAATGCAGCCATAGCAAAGCCGACTGTACCGAGCCTC
GCAAGATGGGGGCATGCTTCAACTGTGGCCAGGACGGGTGAGTTATTATTGAACATCTTGTGTATTACGGCGTTA
ATTATTCTCTTGAAACAGTCACTCCAAGGCCGAATGCACCGAGCCTCGCAAGATGGGCGCTTGCTTCAACTGTGG
CGAAGAAGGGTGAGTAACTGCTGGGCGTTTTATACTTTAGTTTGCTAATTGGCTCCAAATACAGTCACTCCAAGT
CCGAATGTCCTAAGCCTCGCGTGTTCAGGGGTACCTGCCGTATCTGCGAAAAGGAAGGCCACCCAGCGGTTGATT
GTCCTGAGAGACCCCCCGATGTTTGCAAGAACTGCCAGGCCCAAGGCCACAAGACGATGGAGTGCAAGGAGAATC
GCAAGTTCGATCTCAACCTTGTTGCTGACATGCTACCCCAAGAAGGTTGGGCTGCAATGAAGAAAGCCAGTGACG
AAAGGGATCTTGATGATTTCCGAGAGGTACCAAAAATCCATACGTACCTTGAAAGTTTCGAACTTTGGCTGACCT
AACTCCAGGCACTTAAAATCTACTCCAAGGCAGTCCCCAATGCCACCTGGGCAGACATTGAGAAGAAGATGCGAG
AGGATAATTTCAACATCTACATCATTGCTATGGTAATCAATCATCATCGTTCTGATACTTGGGGATGAATCGCTA
ATGAATGAATTTTAATTATAGGAGGCTGAAGTTGACGATGTCATGAGCCTTATCGATCTTCAGGGAGTACTTGAC
CGTGAGTACGTGATTGGATTCTTTTTCAACCCCAAGGCGTCGCGTGGCCACCTCCGAGATCGTTGGCCTGCAGAT
GCCGAGGAGAACCTAGAGCGCATGAAGAGCGCCGGTATTCCCTACGAGCGCAAGGTGCCTAAGTGCCTGAACTGT
GGAGGTAAGTGTTTACTTTGAAGATTCCTTATAATATTGCTAAATTCTGTTTAGAGTTGGGACATATCTCCCGCA
GTTGCAAGGAGGAGCGCGCCGAGGGCAATGATCGTGTGGAAATCAAGTGCTCAAACTGTGAGGGAGCTGGACACC
GCGTACGCGATTGCAGACAGCAGCGCAAGCACAAGCATGGTTGCCGTAACTGCGGGTATGTGGCTGTGGTGCAAA
CAACGAACTGGATAATGCTGACTTTTATGAAGATCTATTGAGCATATTGCTTCTGACTGCACCGAGCCCCGATCT
GCGGCTGGTGTTGAATGCCGGAGATGCAACGAAAGTAAGACCTTGCCCAAGATGATTCAAATATTTCATGATGCT
AATGTATCTATTTCAGCTGGCCACTTTGCCAAAGATTGCCCCACTGTTGCTGACCGTGGCCCTCGCACCTGCCGC
AATTGCGGGTATGTTAAAATATCATAGCCCCTGCGATTGTCGCTGATTCTAACATCAATACAGATCCGAAGACCA
CATCGCTCGCGATTGTGATCAACCTCGTGACGTTTCCACTGTTACCTGCCGCAACTGCGAAAAGAGTAAGTGCGA
TGCATGCCCCAAAGATTCTTGGAAACACAACTGACAACTGCTATTTTAGCCGGACATTACTCTCGTGATTGTGAT
CAGCCGAAAGATTGGTCGAAGGTTCAGTGCAAGAACTGCGGAGAAAGTGAGTTGATACATGCGTTTTTAATACTG
AGTTAGTCCGCTAACAATCCTTAGTGGGTCACACTGTTGTCCGTTGCCGCCAGCCGCCTAAGGAGGAAGAGCCTC
AAGACGAACCTACTTTCTCCCCCGGCTCTCCCAAGCGCGAGGAACCTGATCCGCTGAACTCAGAGGCTACTGACC
AACAGTTTGAATACAAGCGCCATGACGACGAGGACCTCTGGTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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