© 2022 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | Pro_DTO070G2_2|g6338.t1 |
| Gene name | |
| Location | scaffold_09:260492..262079 |
| Strand | + |
| Gene length (bp) | 1587 |
| Transcript length (bp) | 1536 |
| Coding sequence length (bp) | 1536 |
| Protein length (aa) | 512 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00282 | Pyridoxal_deC | Pyridoxal-dependent decarboxylase conserved domain | 9.2E-77 | 52 | 395 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0030170 | pyridoxal phosphate binding | Yes |
| GO:0016830 | carbon-carbon lyase activity | Yes |
| GO:0019752 | carboxylic acid metabolic process | Yes |
| GO:0008152 | metabolic process | No |
| GO:0006082 | organic acid metabolic process | No |
| GO:0070279 | vitamin B6 binding | No |
| GO:0016829 | lyase activity | No |
| GO:0097159 | organic cyclic compound binding | No |
| GO:1901363 | heterocyclic compound binding | No |
| GO:0009987 | cellular process | No |
| GO:0043168 | anion binding | No |
| GO:0043436 | oxoacid metabolic process | No |
| GO:0003824 | catalytic activity | No |
| GO:0008150 | biological_process | No |
| GO:0003674 | molecular_function | No |
| GO:0019842 | vitamin binding | No |
| GO:0043167 | ion binding | No |
| GO:0036094 | small molecule binding | No |
| GO:0005488 | binding | No |
| GO:0071704 | organic substance metabolic process | No |
| GO:0044281 | small molecule metabolic process | No |
| GO:0044237 | cellular metabolic process | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 58 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Pro_DTO070G2_2|g6338.t1 MVHLAKVKKDSELPSARQFDSIPPIETNDADTNVYGTHFAVDHMPQHEMPEREMPRQIAARMIKDELSLDGNPKL NLASFVTTYMEEEIEEIMTDSFSKNFIDYEEYPHSAEIQNRCVNMIARLFNIPTDAASENAMGTSTIGSSEAIML GTLAMKKRWQNKRKAEGKDFSRPNIIMNSAVQVCWEKAARYFDIEEKYVFCTDTRFVIDPQQAVDLVDENTIGIC AILGTTYTGEYEDVKAINDLLVERNIDCPIHVDAASGGFVAPFTDPNLVWDFRLEKVVSINVSGHKYGLVYPGVG WVIWRAVEYLPQELVFNINYLGADQASFTLNFSKGASHVIGQYYQFIRLGKHGYRAIMTNLTRISDFMASEFEKL GMVILSQTQGRGLPLVAWRLPTDPNRVYDEFALAHQLRERGWVVPAYTMAPHSEKMKMMRIVIREDFSMNRCDSL IQDFKLAIDTLDAMDKNMMAKYRVHMKNHRNQPRHQSLIHRHYLEEKHSLQGKDGKTHGVC* |
| Coding | >Pro_DTO070G2_2|g6338.t1 ATGGTTCATCTCGCCAAAGTCAAGAAGGACAGTGAGCTCCCCTCGGCTCGTCAATTTGACTCCATTCCCCCCATC GAGACAAATGACGCCGACACCAATGTCTACGGCACTCACTTTGCCGTGGACCACATGCCCCAGCATGAAATGCCA GAGCGGGAGATGCCCCGCCAGATCGCCGCTCGGATGATCAAGGATGAGCTGAGTCTGGACGGTAACCCTAAGCTC AACCTCGCCAGTTTCGTCACCACCTACATGGAAGAGGAGATCGAGGAGATCATGACCGACTCCTTCAGCAAAAAC TTCATTGATTACGAGGAGTACCCTCACTCCGCCGAGATCCAAAACCGATGTGTCAATATGATTGCTAGACTTTTC AACATTCCCACCGATGCCGCCAGTGAGAACGCCATGGGTACTTCAACCATTGGATCTTCCGAGGCTATCATGCTG GGCACACTGGCTATGAAGAAGCGCTGGCAGAACAAGCGCAAGGCCGAGGGCAAGGACTTCTCGCGCCCCAACATT ATTATGAACAGTGCTGTCCAGGTCTGCTGGGAGAAGGCTGCTCGTTACTTTGATATCGAGGAGAAGTACGTCTTC TGTACCGACACCCGTTTCGTCATCGATCCCCAGCAGGCTGTGGATCTGGTGGATGAGAACACAATCGGTATCTGC GCCATCCTGGGTACCACCTACACCGGCGAATACGAGGATGTCAAGGCCATCAACGATCTGCTGGTGGAGCGTAAC ATTGACTGCCCGATCCACGTCGACGCAGCTAGTGGTGGCTTCGTCGCTCCATTCACCGACCCTAACCTCGTCTGG GATTTCCGCCTGGAAAAGGTGGTATCCATCAACGTCTCCGGTCACAAGTATGGTCTAGTCTACCCCGGTGTCGGA TGGGTTATCTGGCGCGCGGTGGAGTATCTGCCCCAAGAATTGGTGTTCAACATCAACTACCTCGGAGCCGACCAG GCCAGCTTTACCCTGAACTTCTCCAAGGGTGCTTCCCATGTCATTGGACAATACTACCAGTTTATCCGCCTGGGT AAGCACGGTTACCGTGCCATCATGACCAACCTGACTCGCATCAGTGACTTCATGGCGTCAGAGTTTGAGAAGTTG GGCATGGTCATCCTGAGCCAGACGCAGGGCAGGGGCCTGCCCCTAGTGGCCTGGCGCCTTCCCACAGACCCCAAT CGGGTCTACGATGAATTCGCTCTGGCCCACCAGCTCCGCGAGCGCGGCTGGGTTGTTCCTGCGTACACTATGGCG CCCCACAGCGAGAAAATGAAGATGATGCGCATTGTCATCCGCGAAGACTTCAGCATGAACCGATGCGACAGTTTG ATCCAGGACTTCAAACTTGCCATTGATACTTTGGATGCAATGGACAAGAATATGATGGCCAAGTACAGAGTGCAC ATGAAGAACCACCGCAACCAACCTCGCCACCAGTCGCTTATTCACCGTCACTACCTGGAAGAGAAGCACTCGCTC CAGGGCAAGGATGGCAAGACACATGGCGTGTGTTAA |
| Transcript | >Pro_DTO070G2_2|g6338.t1 ATGGTTCATCTCGCCAAAGTCAAGAAGGACAGTGAGCTCCCCTCGGCTCGTCAATTTGACTCCATTCCCCCCATC GAGACAAATGACGCCGACACCAATGTCTACGGCACTCACTTTGCCGTGGACCACATGCCCCAGCATGAAATGCCA GAGCGGGAGATGCCCCGCCAGATCGCCGCTCGGATGATCAAGGATGAGCTGAGTCTGGACGGTAACCCTAAGCTC AACCTCGCCAGTTTCGTCACCACCTACATGGAAGAGGAGATCGAGGAGATCATGACCGACTCCTTCAGCAAAAAC TTCATTGATTACGAGGAGTACCCTCACTCCGCCGAGATCCAAAACCGATGTGTCAATATGATTGCTAGACTTTTC AACATTCCCACCGATGCCGCCAGTGAGAACGCCATGGGTACTTCAACCATTGGATCTTCCGAGGCTATCATGCTG GGCACACTGGCTATGAAGAAGCGCTGGCAGAACAAGCGCAAGGCCGAGGGCAAGGACTTCTCGCGCCCCAACATT ATTATGAACAGTGCTGTCCAGGTCTGCTGGGAGAAGGCTGCTCGTTACTTTGATATCGAGGAGAAGTACGTCTTC TGTACCGACACCCGTTTCGTCATCGATCCCCAGCAGGCTGTGGATCTGGTGGATGAGAACACAATCGGTATCTGC GCCATCCTGGGTACCACCTACACCGGCGAATACGAGGATGTCAAGGCCATCAACGATCTGCTGGTGGAGCGTAAC ATTGACTGCCCGATCCACGTCGACGCAGCTAGTGGTGGCTTCGTCGCTCCATTCACCGACCCTAACCTCGTCTGG GATTTCCGCCTGGAAAAGGTGGTATCCATCAACGTCTCCGGTCACAAGTATGGTCTAGTCTACCCCGGTGTCGGA TGGGTTATCTGGCGCGCGGTGGAGTATCTGCCCCAAGAATTGGTGTTCAACATCAACTACCTCGGAGCCGACCAG GCCAGCTTTACCCTGAACTTCTCCAAGGGTGCTTCCCATGTCATTGGACAATACTACCAGTTTATCCGCCTGGGT AAGCACGGTTACCGTGCCATCATGACCAACCTGACTCGCATCAGTGACTTCATGGCGTCAGAGTTTGAGAAGTTG GGCATGGTCATCCTGAGCCAGACGCAGGGCAGGGGCCTGCCCCTAGTGGCCTGGCGCCTTCCCACAGACCCCAAT CGGGTCTACGATGAATTCGCTCTGGCCCACCAGCTCCGCGAGCGCGGCTGGGTTGTTCCTGCGTACACTATGGCG CCCCACAGCGAGAAAATGAAGATGATGCGCATTGTCATCCGCGAAGACTTCAGCATGAACCGATGCGACAGTTTG ATCCAGGACTTCAAACTTGCCATTGATACTTTGGATGCAATGGACAAGAATATGATGGCCAAGTACAGAGTGCAC ATGAAGAACCACCGCAACCAACCTCGCCACCAGTCGCTTATTCACCGTCACTACCTGGAAGAGAAGCACTCGCTC CAGGGCAAGGATGGCAAGACACATGGCGTGTGTTAA |
| Gene | >Pro_DTO070G2_2|g6338.t1 ATGGTTCATCTCGCCAAAGTCAAGAAGGACAGTGAGCTCCCCTCGGCTCGTCAATTTGACTCCATTCCCCCCATC GAGACAAATGACGCCGACACCAATGTCTACGGCACTCACTTTGCCGTGGACCACATGCCCCAGCATGAAATGCCA GAGCGGGAGATGCCCCGCCAGATCGCCGCTCGGATGATCAAGGATGAGCTGAGTCTGGACGGTAACCCTAAGCTC AACCTCGCCAGTTTCGTCACCACCTACATGGAAGAGGAGATCGAGGAGATCATGACCGACTCCTTCAGCAAAAAC TTCATTGATTACGAGGAGTACCCTCACTCCGCCGAGATCCAAAACCGATGTGTCAATATGATTGCTAGACTTTTC AACATTCCCACCGATGCCGCCAGTGAGAACGCCATGGGTACTTCAACCATTGGATCTTCCGAGGCTATCATGCTG GGCACACTGGCTATGAAGAAGCGCTGGCAGAACAAGCGCAAGGCCGAGGGCAAGGACTTCTCGCGCCCCAACATT ATTATGAACAGTGCTGTCCAGGTCTGCTGGGAGAAGGCTGCTCGTTACTTTGATATCGAGGAGAAGTACGTCTTC TGTACCGACACCCGTTTCGTCATCGATCCCCAGCAGGCTGTGGATCTGGTGGATGAGAACACAATCGGTATCTGC GCCATCCTGGGTACCACCTACACCGGCGAATACGAGGATGTCAAGGCCATCAACGATCTGCTGGTGGAGCGTAAC ATTGACTGCCCGATCCACGTCGACGCAGCTAGTGGTGGCTTCGTCGCTCCATTCACCGACCCTAACCTCGTCTGG GATTTCCGCCTGGAAAAGGTGGTATCCATCAACGTCTCCGGTCACAAGTATGGTCTAGTCTACCCCGGTGTCGGA TGGGTTATCTGGCGCGCGGTGGAGTATCTGCCCCAAGAATTGGTGTTCAACATCAACTACCTCGGAGCCGACCAG GCCAGCTTTACCCTGAACTTCTCCAAGGGTGCTTCCCATGTCATTGGACAATACTACCAGTTTATCCGCCTGGGT AAGCACGGTTACCGTGCCATCATGACCAACCTGACTCGCATCAGTGACTTCATGGCGTCAGAGTTTGAGAAGTTG GGCATGGTCATCCTGAGCCAGACGCAGGGCAGGGGCCTGCCCCTAGTGGCCTGGCGCCTTCCCACAGACCCCAAT CGGGTCTACGATGAATTCGCTCTGGCCCACCAGCTCCGCGAGCGCGGCTGGGTTGTTCCTGCGTACACTATGGCG CCCCACAGCGAGAAAATGAAGATGATGCGCATTGTCATCCGCGAAGACTTCAGCATGAACCGATGCGACAGTTTG ATCCAGGACTTCAAACTTGCCATTGATACTTTGGATGCAATGGACAAGAATATGATGGCCAAGTACAGAGTGTGA GTTTATTCTGTCCTAATGTTTCGATTTTCATACTAACAGCTCCACAGGCACATGAAGAACCACCGCAACCAACCT CGCCACCAGTCGCTTATTCACCGTCACTACCTGGAAGAGAAGCACTCGCTCCAGGGCAAGGATGGCAAGACACAT GGCGTGTGTTAA |