Protein ID | Pro_DTO070G2_2|g6286.t1 |
Gene name | |
Location | scaffold_09:119660..121775 |
Strand | + |
Gene length (bp) | 2115 |
Transcript length (bp) | 1944 |
Coding sequence length (bp) | 1944 |
Protein length (aa) | 648 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF02990 | EMP70 | Endomembrane protein 70 | 3.9E-205 | 62 | 603 |
GO Term | Description | Terminal node |
---|---|---|
GO:0016021 | integral component of membrane | Yes |
GO:0005575 | cellular_component | No |
GO:0031224 | intrinsic component of membrane | No |
GO:0110165 | cellular anatomical entity | No |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
Yes | 1 - 24 | 0.45 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 7 | 29 | 22 |
2 | 272 | 294 | 22 |
3 | 347 | 369 | 22 |
4 | 384 | 406 | 22 |
5 | 418 | 440 | 22 |
6 | 455 | 477 | 22 |
7 | 505 | 527 | 22 |
8 | 542 | 564 | 22 |
9 | 577 | 599 | 22 |
10 | 614 | 636 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Pro_DTO070G2_2|g6286.t1 MRFADRAFLLSSTLLAIPSLTTAFYLPGVAPTSYDEGQAVPLYVNHLTPSLSRDDQLHSVFSYDYYHPAFGFCRP ADGPKDVRESLGSILFGDRIRTSPFELHMAKNETCKSICAEAKFDARSAKWTNRRIAQGYNINWIVDGLPAAQLN YDGVTKTKFYNPGFSLGELDDNGQALLNNHYDIVIDYHKVGFGGKDKYRVVGVLVQPESRKDSRNLEGGAAECGT PGNVLALNEDGETTVTWTYSVYWKESPTAWATRWDKYLHVYDPKIHWFSLINSAVFVVFLVGMVSMILVRALKKD IARYNRLDSFNLEDLDSTSAAIEDGVQEDSGWKLVHGDVFRCPESPLLLSVMVGNGAQLFMMTGVTVAFALLGLL SPSNRGFLATAILLISALFGGIGGYVSARVYKTFGGDSWRRNIIMTPLFIPGIIFGTFFILNLFVWAKGSSGAVP FGTMLALVLIWFVISVPLSVAGSWLGFKQSPLEGPTKTNQIPRQVPPMAGSLRTIPSILLTGILPFGAIFVELYF IMTSLWTNKIYYMFGFLFLCYGLMIITSAATTVLLVYFLLCAENYRWHWRAFIGAGMTGGYVFLNALIFWATRVS FGGLTGAVLYVGYSALIAFIVFILTGSIGFFASWAFIHRIYGSIKVD* |
Coding | >Pro_DTO070G2_2|g6286.t1 ATGCGGTTCGCCGATCGAGCCTTTCTTCTCTCGTCGACCCTACTAGCAATCCCTTCTTTGACTACGGCCTTTTAT CTGCCGGGTGTTGCGCCGACCTCCTACGACGAAGGACAAGCAGTTCCGCTTTATGTCAACCACCTCACCCCCAGC CTCTCTCGCGATGACCAGCTTCATTCGGTCTTCTCATATGACTACTATCATCCGGCTTTTGGATTCTGCCGACCA GCAGATGGTCCTAAAGATGTGAGGGAATCCCTGGGGAGCATTCTATTCGGTGACCGCATTCGCACCTCGCCATTC GAGCTTCACATGGCAAAGAATGAGACCTGCAAATCGATATGTGCAGAGGCCAAATTCGACGCCCGCAGCGCAAAG TGGACCAATCGACGAATAGCTCAGGGCTACAACATTAACTGGATTGTGGATGGGCTGCCAGCCGCGCAGTTGAAC TATGACGGCGTTACCAAGACCAAATTTTATAACCCTGGCTTCTCTCTGGGTGAGCTAGATGACAATGGGCAGGCT CTGCTCAACAATCACTATGACATTGTGATTGATTACCATAAGGTGGGCTTTGGCGGCAAGGATAAATATCGCGTG GTTGGAGTGCTTGTCCAGCCTGAGTCTCGCAAGGACTCCCGGAATTTAGAAGGCGGGGCCGCTGAATGTGGTACC CCGGGCAATGTTCTCGCGCTCAATGAGGACGGCGAGACCACAGTCACCTGGACGTATAGTGTGTACTGGAAGGAG TCCCCCACAGCCTGGGCTACCCGGTGGGATAAGTATCTTCATGTCTATGACCCTAAAATCCACTGGTTCTCTCTC ATCAACTCGGCTGTCTTTGTGGTTTTCCTCGTGGGTATGGTCAGCATGATTCTAGTCCGCGCGCTCAAGAAGGAT ATTGCTCGCTATAACAGGCTGGATTCGTTCAACCTGGAGGATTTGGATAGCACTTCGGCTGCGATCGAAGATGGA GTCCAGGAGGATTCTGGCTGGAAGTTGGTCCATGGCGATGTCTTCCGGTGCCCCGAATCTCCGTTGCTGCTGAGT GTGATGGTTGGCAACGGCGCCCAGCTATTTATGATGACTGGTGTGACTGTCGCATTTGCCCTGCTTGGTCTCCTC TCTCCTTCCAACCGCGGATTCCTGGCTACTGCCATTCTCCTAATTTCCGCCCTTTTCGGTGGGATCGGTGGTTAT GTGTCGGCGCGAGTGTACAAGACATTTGGTGGCGATTCTTGGAGGCGCAACATTATCATGACACCTCTATTTATA CCTGGCATTATATTCGGTACTTTCTTCATCCTGAATCTCTTTGTTTGGGCCAAGGGATCTAGCGGTGCCGTACCA TTTGGAACTATGTTGGCACTGGTATTGATTTGGTTTGTTATCAGCGTGCCATTGAGCGTGGCAGGCAGTTGGTTG GGCTTTAAGCAATCGCCGCTTGAGGGTCCTACCAAGACGAACCAAATTCCTCGACAGGTTCCTCCGATGGCTGGT AGCCTGCGCACAATTCCATCGATTCTGCTGACCGGAATTCTCCCCTTTGGTGCGATTTTCGTCGAGTTGTACTTT ATAATGACCTCCCTCTGGACCAACAAGATCTACTACATGTTCGGATTCCTGTTCCTCTGCTACGGCTTGATGATC ATTACCTCTGCGGCTACTACCGTCTTGCTGGTGTATTTCTTGTTGTGTGCAGAGAACTACCGGTGGCACTGGCGC GCCTTCATAGGCGCGGGTATGACCGGAGGATATGTCTTTTTGAATGCGCTCATTTTCTGGGCGACACGGGTCAGC TTTGGTGGATTAACGGGGGCAGTGCTTTATGTGGGCTATTCGGCGCTGATCGCCTTCATTGTGTTTATTCTGACT GGCTCCATTGGTTTCTTCGCCAGTTGGGCATTCATCCACCGCATCTATGGCTCGATCAAGGTGGACTAA |
Transcript | >Pro_DTO070G2_2|g6286.t1 ATGCGGTTCGCCGATCGAGCCTTTCTTCTCTCGTCGACCCTACTAGCAATCCCTTCTTTGACTACGGCCTTTTAT CTGCCGGGTGTTGCGCCGACCTCCTACGACGAAGGACAAGCAGTTCCGCTTTATGTCAACCACCTCACCCCCAGC CTCTCTCGCGATGACCAGCTTCATTCGGTCTTCTCATATGACTACTATCATCCGGCTTTTGGATTCTGCCGACCA GCAGATGGTCCTAAAGATGTGAGGGAATCCCTGGGGAGCATTCTATTCGGTGACCGCATTCGCACCTCGCCATTC GAGCTTCACATGGCAAAGAATGAGACCTGCAAATCGATATGTGCAGAGGCCAAATTCGACGCCCGCAGCGCAAAG TGGACCAATCGACGAATAGCTCAGGGCTACAACATTAACTGGATTGTGGATGGGCTGCCAGCCGCGCAGTTGAAC TATGACGGCGTTACCAAGACCAAATTTTATAACCCTGGCTTCTCTCTGGGTGAGCTAGATGACAATGGGCAGGCT CTGCTCAACAATCACTATGACATTGTGATTGATTACCATAAGGTGGGCTTTGGCGGCAAGGATAAATATCGCGTG GTTGGAGTGCTTGTCCAGCCTGAGTCTCGCAAGGACTCCCGGAATTTAGAAGGCGGGGCCGCTGAATGTGGTACC CCGGGCAATGTTCTCGCGCTCAATGAGGACGGCGAGACCACAGTCACCTGGACGTATAGTGTGTACTGGAAGGAG TCCCCCACAGCCTGGGCTACCCGGTGGGATAAGTATCTTCATGTCTATGACCCTAAAATCCACTGGTTCTCTCTC ATCAACTCGGCTGTCTTTGTGGTTTTCCTCGTGGGTATGGTCAGCATGATTCTAGTCCGCGCGCTCAAGAAGGAT ATTGCTCGCTATAACAGGCTGGATTCGTTCAACCTGGAGGATTTGGATAGCACTTCGGCTGCGATCGAAGATGGA GTCCAGGAGGATTCTGGCTGGAAGTTGGTCCATGGCGATGTCTTCCGGTGCCCCGAATCTCCGTTGCTGCTGAGT GTGATGGTTGGCAACGGCGCCCAGCTATTTATGATGACTGGTGTGACTGTCGCATTTGCCCTGCTTGGTCTCCTC TCTCCTTCCAACCGCGGATTCCTGGCTACTGCCATTCTCCTAATTTCCGCCCTTTTCGGTGGGATCGGTGGTTAT GTGTCGGCGCGAGTGTACAAGACATTTGGTGGCGATTCTTGGAGGCGCAACATTATCATGACACCTCTATTTATA CCTGGCATTATATTCGGTACTTTCTTCATCCTGAATCTCTTTGTTTGGGCCAAGGGATCTAGCGGTGCCGTACCA TTTGGAACTATGTTGGCACTGGTATTGATTTGGTTTGTTATCAGCGTGCCATTGAGCGTGGCAGGCAGTTGGTTG GGCTTTAAGCAATCGCCGCTTGAGGGTCCTACCAAGACGAACCAAATTCCTCGACAGGTTCCTCCGATGGCTGGT AGCCTGCGCACAATTCCATCGATTCTGCTGACCGGAATTCTCCCCTTTGGTGCGATTTTCGTCGAGTTGTACTTT ATAATGACCTCCCTCTGGACCAACAAGATCTACTACATGTTCGGATTCCTGTTCCTCTGCTACGGCTTGATGATC ATTACCTCTGCGGCTACTACCGTCTTGCTGGTGTATTTCTTGTTGTGTGCAGAGAACTACCGGTGGCACTGGCGC GCCTTCATAGGCGCGGGTATGACCGGAGGATATGTCTTTTTGAATGCGCTCATTTTCTGGGCGACACGGGTCAGC TTTGGTGGATTAACGGGGGCAGTGCTTTATGTGGGCTATTCGGCGCTGATCGCCTTCATTGTGTTTATTCTGACT GGCTCCATTGGTTTCTTCGCCAGTTGGGCATTCATCCACCGCATCTATGGCTCGATCAAGGTGGACTAA |
Gene | >Pro_DTO070G2_2|g6286.t1 ATGCGGTTCGCCGATCGAGCCTTTCTTCTCTCGTCGACCCTACTAGCAATCCCTTCTTTGACTACGGCCTTTTAT CTGCCGGGTGTTGCGCCGACCTCCTACGACGAAGGACAAGCAGTTCCGCTTTATGTCAACCACCTCACCCCCAGC CTCTCTCGCGATGACCAGCTTCATTCGGTCTTCTCATATGACTACTATCATCCGGCTTTTGGATTCTGCCGACCA GCAGATGGTCCTAAAGATGTGAGGGAATCCCTGGGGAGCATTCTATTCGGTGACCGCATTCGCACCTCGCCATTC GAGCTTCACATGGCAAAGAATGAGACCTGCAAATCGATATGTGCAGAGGCCAAATTCGACGCCCGCAGCGCAAAG TGGACCAATCGACGAATAGCTCAGGGCTACAACATTAACTGGATTGTGGATGGGCTGCCAGCCGCGCAGTTGAAC TATGACGGCGTTACCAAGACCAAATTTTATAACCCTGGCTTCTCTCTGGGTGAGCTAGATGACAATGGGCAGGCT CTGCTCAACAATCACTATGACATTGTGATTGATTACCATAAGGTGGGCTTTGGCGGCAAGGATAAATATCGCGTG GTTGGAGTGCTTGTCCAGCCTGAGTCTCGCAAGGACTCCCGGAATTTAGAAGGCGGGGCCGCTGAATGTGGTACC CCGGGCAATGTTCTCGCGCTCAATGAGGACGGCGAGACCACAGTCACCTGGACGTATAGTGTGTACTGGAAGGAG TCCCCCACAGCCTGGGCTACCCGGTGGGATAAGTATCTTCATGTCTATGACCCTAAAATCCACTGGTTCTCTCTC ATCAACTCGGCTGTCTTTGTGGTTTTCCTCGTGGGTATGGTCAGCATGATTCTAGTCCGCGCGCTCAAGAAGGAT ATTGCTCGCTATAACAGGCTGGATTCGTTCAACCTGGAGGATTTGGATAGCACTTCGGCTGCGATCGAAGATGGA GTCCAGGAGGATTCTGGCTGGAAGTTGGTCCATGGCGATGTCTTCCGGTGCCCCGAATCTCCGTTGCTGCTGAGT GTGATGGTTGGCAACGGCGCCCAGCTATTTATGATGACTGGTGTGACTGTCGGTGAGTAGTCTGACTCCCGCTCT TCTTCTCTTTGTACTGATTTTTATTTGTAGCATTTGCCCTGCTTGGTCTCCTCTCTCCTTCCAACCGCGGATTCC TGGCTACTGCCATTCTCCTAATTTCCGCCCTTTTCGGTGGGATCGGTGGTTATGTGTCGGCGCGAGTGTACAAGA CATTTGGTGGCGATTCTTGGAGGCGCAACATTATCATGACACCTCTATTTATACCTGGCATTATATTCGGTACTT TCTTCATCCTGAATCTCTTTGTTTGGGCCAAGGGATCTAGCGGTGCCGTACCATTTGGAACTATGTTGGCACTGG TATTGATTTGGTTTGTTATCAGCGTGCCATTGAGCGTGGCAGGCAGTTGGTTGGGCTTTAAGCAATCGGTACTAT CAAATTCCAATCCCGTTATCCAGACATTCCGATGACTAACTTCATTTCCCAATAGCCGCTTGAGGGTCCTACCAA GACGAACCAAATTCCTCGACAGGTTCCTCCGATGGCTGGTAGCCTGCGCACAATTCCATCGATTCTGCTGACCGG AATTCTCCCCTTTGGTGCGATTTTCGTCGAGTTGTACTTTATAATGACCTCCCTCTGGACCAACAAGATCTACTA CATGTTCGGATTCCTGTTCCTCTGCTACGGCTTGATGATCATTACCTCTGCGGCTACTACCGTCTTGCTGGTGTA TTTCTTGTTGTGTGCAGAGAACTACCGGTGGCACTGGCGCGCCTTCATAGGCGCGGGTATGACCGGAGGATATGT CTTTTTGAATGCGCTCATTTTCTGGGCGACACGGGTCAGCTTTGGTGGATTAACGGGGGCAGTGCTTTATGTGGG CTATTCGGCGCTGATCGCCTTCATTGTGTTTATTCTGACTGGTATGTTTTTGTTCCCATGTCTTGCGGATGGGCT TCTTTTGCTGACTTCTCTCCAGGCTCCATTGGTTTCTTCGCCAGTTGGGCATTCATCCACCGCATCTATGGCTCG ATCAAGGTGGACTAA |