Protein ID | Pro_DTO070G2_2|g6253.t1 |
Gene name | |
Location | scaffold_09:33645..35353 |
Strand | + |
Gene length (bp) | 1708 |
Transcript length (bp) | 1242 |
Coding sequence length (bp) | 1242 |
Protein length (aa) | 414 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF05730 | CFEM | CFEM domain | 2.1E-12 | 20 | 83 |
SignalP signal predicted | Location | Score |
---|---|---|
Yes | 1 - 19 | 0.999539 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 91 | 113 | 22 |
2 | 126 | 148 | 22 |
3 | 173 | 195 | 22 |
4 | 202 | 224 | 22 |
5 | 256 | 278 | 22 |
6 | 285 | 307 | 22 |
7 | 322 | 344 | 22 |
Orthofinder run ID | 2 |
Orthogroup | 8779 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Pro_DTO070G2_2|g6253.t1 MRLATRLAFPIAAFTAIAATQNIPQCAADCLAAGLKNSTCTATDVDCICADKTLMANVEACSLGACTVIEGLESQ NATATLCHWPVRDKSLIAPIATAVTGTLALAFISIRVVDCAAKKEFKWADLCAVLAFIFSLPMDIFEFFMMGSGM GKDVWTLTEKQITNTAKYTWVTQVSYIPAIILTKVTIVCFFLHIFPGPRFRLLCQGTIVHCFLFMISTFITEILT CIPVEEAWSGWKGESTALCYNSNSFWWAHSAINIATDLWIIGLPIPMLFGLQLKTSKKIYLVLMFSIGIVITVIS IVRFSGLLKYSTTSNLTYNNVMVATYSVIECNVSIMCCCMPTLLSTLRRVFPTIFGSTNRSYNYNYNYNNTPFLD TNGIQKSVTHKVTYTTPDGLEDDVVELVDRGEDYPRRK* |
Coding | >Pro_DTO070G2_2|g6253.t1 ATGCGGTTAGCAACGCGGCTAGCATTTCCCATCGCAGCCTTTACGGCTATTGCTGCGACCCAGAACATTCCGCAA TGTGCAGCCGACTGTCTGGCCGCGGGTCTCAAGAATTCGACATGTACCGCGACAGACGTCGACTGCATATGCGCC GACAAGACACTGATGGCCAATGTCGAGGCTTGCTCACTGGGAGCCTGCACCGTCATTGAAGGACTTGAGTCCCAA AATGCCACGGCTACGCTCTGCCACTGGCCGGTCCGGGACAAGAGTCTTATCGCTCCCATCGCGACAGCCGTTACC GGTACCTTGGCTCTCGCTTTTATCAGCATCAGAGTGGTTGACTGTGCTGCTAAGAAGGAGTTCAAGTGGGCTGAC CTGTGCGCGGTCCTTGCATTTATCTTTTCGTTACCTATGGACATATTTGAATTCTTCATGATGGGTTCAGGGATG GGAAAGGACGTTTGGACCTTGACGGAAAAACAAATCACGAACACAGCGAAGTATACCTGGGTAACCCAAGTATCG TATATCCCTGCAATTATCCTGACCAAGGTGACCATCGTCTGCTTTTTCCTACATATCTTCCCGGGCCCCAGATTC CGACTGCTATGCCAGGGGACTATCGTCCACTGCTTTCTGTTCATGATTTCGACTTTTATCACTGAAATTCTTACT TGCATTCCGGTCGAAGAGGCCTGGTCAGGCTGGAAGGGCGAAAGTACAGCCCTATGCTATAATAGCAACTCCTTC TGGTGGGCGCATTCGGCAATCAACATCGCTACCGATCTATGGATCATCGGCCTGCCCATTCCAATGCTCTTCGGA CTCCAGCTCAAGACGAGTAAGAAGATCTACCTGGTTCTGATGTTCAGCATCGGTATCGTAATCACGGTAATTAGT ATTGTCAGGTTCTCAGGTCTGCTAAAGTACTCTACGACATCAAACTTAACATACAACAACGTCATGGTAGCAACA TACAGTGTCATCGAGTGTAACGTTTCGATTATGTGCTGCTGCATGCCTACCCTACTTTCCACCCTTCGCCGAGTC TTCCCCACGATATTCGGTAGTACCAATCGCTCTTACAATTACAACTACAATTACAACAATACTCCCTTTTTGGAC ACCAATGGGATCCAAAAGTCTGTTACACATAAGGTGACATACACGACTCCCGATGGGCTTGAGGATGATGTAGTC GAGTTGGTGGATAGAGGCGAGGATTACCCACGGAGGAAATAG |
Transcript | >Pro_DTO070G2_2|g6253.t1 ATGCGGTTAGCAACGCGGCTAGCATTTCCCATCGCAGCCTTTACGGCTATTGCTGCGACCCAGAACATTCCGCAA TGTGCAGCCGACTGTCTGGCCGCGGGTCTCAAGAATTCGACATGTACCGCGACAGACGTCGACTGCATATGCGCC GACAAGACACTGATGGCCAATGTCGAGGCTTGCTCACTGGGAGCCTGCACCGTCATTGAAGGACTTGAGTCCCAA AATGCCACGGCTACGCTCTGCCACTGGCCGGTCCGGGACAAGAGTCTTATCGCTCCCATCGCGACAGCCGTTACC GGTACCTTGGCTCTCGCTTTTATCAGCATCAGAGTGGTTGACTGTGCTGCTAAGAAGGAGTTCAAGTGGGCTGAC CTGTGCGCGGTCCTTGCATTTATCTTTTCGTTACCTATGGACATATTTGAATTCTTCATGATGGGTTCAGGGATG GGAAAGGACGTTTGGACCTTGACGGAAAAACAAATCACGAACACAGCGAAGTATACCTGGGTAACCCAAGTATCG TATATCCCTGCAATTATCCTGACCAAGGTGACCATCGTCTGCTTTTTCCTACATATCTTCCCGGGCCCCAGATTC CGACTGCTATGCCAGGGGACTATCGTCCACTGCTTTCTGTTCATGATTTCGACTTTTATCACTGAAATTCTTACT TGCATTCCGGTCGAAGAGGCCTGGTCAGGCTGGAAGGGCGAAAGTACAGCCCTATGCTATAATAGCAACTCCTTC TGGTGGGCGCATTCGGCAATCAACATCGCTACCGATCTATGGATCATCGGCCTGCCCATTCCAATGCTCTTCGGA CTCCAGCTCAAGACGAGTAAGAAGATCTACCTGGTTCTGATGTTCAGCATCGGTATCGTAATCACGGTAATTAGT ATTGTCAGGTTCTCAGGTCTGCTAAAGTACTCTACGACATCAAACTTAACATACAACAACGTCATGGTAGCAACA TACAGTGTCATCGAGTGTAACGTTTCGATTATGTGCTGCTGCATGCCTACCCTACTTTCCACCCTTCGCCGAGTC TTCCCCACGATATTCGGTAGTACCAATCGCTCTTACAATTACAACTACAATTACAACAATACTCCCTTTTTGGAC ACCAATGGGATCCAAAAGTCTGTTACACATAAGGTGACATACACGACTCCCGATGGGCTTGAGGATGATGTAGTC GAGTTGGTGGATAGAGGCGAGGATTACCCACGGAGGAAATAG |
Gene | >Pro_DTO070G2_2|g6253.t1 ATGCGGTTAGCAACGCGGCTAGCATTTCCCATCGCAGCCTTTACGGCTATTGCTGCGACCCAGAACATTCCGCAA TGTGCAGTATGAGATCTCTCCAATGATGAAACCGAGTCACGGCTGATAATGACCGCTAGGCCGACTGTCTGGCCG CGGGTCTCAAGAATTCGACATGTACCGCGACAGACGTCGACTGCATATGCGCCGACAAGACACTGATGGCCAATG TCGAGGCTTGCTCACTGGGAGCCTGCACCGTCATTGAAGGACTTGGTATGCCCTGGAATTCTACTCCTTGTAATA CTGATTGACTAGGCTGACTCCATATCCCCAGAGTCCCAAAATGCCACGGCTACGCTCTGCCACTGGCCGGTCCGG GACAAGAGTCTTATCGCTCCCATCGCGACAGCCGTTACCGGTACCTTGGCTCTCGCTTTTATCAGCATCAGAGTG GTTGACTGTGCTGCTAAGAAGGAGTTCAAGTGGGCTGACCTGTGCGCGGTCCTTGCATTTGTGAGTGTGCCACGG TGTGATCATGGAAGTTAGGAGTCTGGCAGCTAACCAGCAGATTAGATCTTTTCGTTACCTATGGACATATTTGAA TTCTTCAGTGTGTTTGTCCTCGTTAACTTGAGTTATAGGTTTGTGCTAACAGCAAAGCAGTGATGGGTTCAGGGA TGGGAAAGGACGTTTGGACCTTGACGGAAAAACAAATCACGAACACAGCGAAGGCAAGTATCATTAGGCAAAAAA TGAGTTCCAGACTGGAGAACTAACAGCGTGGATAGTATACCTGGGTAACCCAAGTATCGTATATCCCTGCAATTA TCCTGACCAAGGTGACCATCGTCTGCTTTTTCCTACATATCTTCCCGGGCCCCAGATTCCGACTGCTATGCCAGG GGACTATCGTCCACTGCTTTCTGTTCATGATTTCGACTTTTATCACTGAAATTCTTACTTGCATTCCGGTCGAAG AGGCCTGGTCAGGCTGGAAGGGCGAAAGTACAGCCCTATGCTATAATAGCAACTCCTTCTGGTGGGCGCATTCGG TACGTCGACTTTTATCACTTGATTGATTGGATTGAGATACCAACTGACTGACCCTAGGCAATCAACATCGCTACC GATCTATGGATCATCGGCCTGCCCATTCCAATGCTCTTCGGACTCCAGCTCAAGACGAGTAAGAAGATCTACCTG GTTCTGATGTTCAGCATCGGTATCGTGTAAGTAGAACCCAACCGTCAACTCCTGCGACTCACTTCTCACAACTTG ATAGAATCACGGTAATTAGTATTGTCAGGTTCTCAGGTCTGCTAAAGTACTCTACGACATCAAACTTAACATGTA AGGCCGACGCCTTTCCTGCTCAGTGTGTTTACTTCTATTTCGTGCCCAAGCTAACCAACGTGCACAAGACAACAA CGTCATGGTAGCAACATACAGTGTCATCGAGTGTAACGTTTCGATTATGTGCTGCTGCATGCCTACCCTACTTTC CACCCTTCGCCGAGTCTTCCCCACGATATTCGGTAGTACCAATCGCTCTTACAATTACAACTACAATTACAACAA TACTCCCTTTTTGGACACCAATGGGATCCAAAAGTCTGTTACACATAAGGTGACATACACGACTCCCGATGGGCT TGAGGATGATGTAGTCGAGTTGGTGGATAGAGGCGAGGATTACCCACGGAGGAAATAG |