© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Pro_DTO070G2_2|g6182.t1 |
| Gene name | |
| Location | scaffold_08:878060..879591 |
| Strand | - |
| Gene length (bp) | 1531 |
| Transcript length (bp) | 1365 |
| Coding sequence length (bp) | 1365 |
| Protein length (aa) | 455 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF03345 | DDOST_48kD | Oligosaccharyltransferase 48 kDa subunit beta | 5.0E-152 | 25 | 443 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0018279 | protein N-linked glycosylation via asparagine | Yes |
| GO:0005789 | endoplasmic reticulum membrane | Yes |
| GO:0018193 | peptidyl-amino acid modification | No |
| GO:0019538 | protein metabolic process | No |
| GO:0044238 | primary metabolic process | No |
| GO:1901564 | organonitrogen compound metabolic process | No |
| GO:0016020 | membrane | No |
| GO:0043413 | macromolecule glycosylation | No |
| GO:0070085 | glycosylation | No |
| GO:0036211 | protein modification process | No |
| GO:0043412 | macromolecule modification | No |
| GO:0031090 | organelle membrane | No |
| GO:0005575 | cellular_component | No |
| GO:0018196 | peptidyl-asparagine modification | No |
| GO:0008152 | metabolic process | No |
| GO:0008150 | biological_process | No |
| GO:0006807 | nitrogen compound metabolic process | No |
| GO:0043170 | macromolecule metabolic process | No |
| GO:0006486 | protein glycosylation | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0071704 | organic substance metabolic process | No |
| GO:0006487 | protein N-linked glycosylation | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| Yes | 1 - 19 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 420 | 442 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Pro_DTO070G2_2|g6182.t1 MRWCLALLICCFLAAVNALSSSGSRLLAILEDTEQKDLYSTLWADLEARGYDVSIESSKSEQLALFKLGERAYDH LLIFPPKSKGLGPSLTPKHIVDFMNKDGNILLALSGKSATSSAISSLLLELDIHLSNDRSQVVVDHFNYDTLSAA EKHDVLVLQRPGPLRSDVKAFFDGEGVLALPRVAPQTLGDSALLSPILKAPATAYSYNPKEGTPAPEDILATGSQ LNIISAMQARNSARFTVLGSVESLEDKWFSASVKTPSGKKTPTVNREFAKQLTAWAFKETGVLKVDKVEHRLITE GAELNPSIYRIKNETIYSIEISEYVYDKWVPFELPGDDALQLEFTMLSPFHRLNLEPVERTDSSTVFSTQFVTPD QHGIFSFRVNYKRPFLTAIEEKLEVTNRHFAHDEYPRSWAITGGWVWIAGLWSVIGGFLAFVVVWLYSAPVADKL KKTQ* |
| Coding | >Pro_DTO070G2_2|g6182.t1 ATGAGGTGGTGTCTTGCGTTGCTTATTTGTTGCTTCTTGGCTGCGGTAAATGCGCTGAGTAGCTCCGGCAGTCGC CTGTTGGCTATTTTGGAAGATACAGAACAAAAGGACCTGTACTCCACGTTGTGGGCAGACCTAGAAGCACGAGGA TACGATGTCTCAATCGAATCTTCCAAGAGTGAACAGCTTGCCTTGTTCAAGCTTGGCGAAAGAGCTTACGACCAC CTTCTAATCTTCCCTCCCAAGTCAAAAGGCCTCGGCCCCTCCTTGACCCCCAAACACATCGTCGACTTTATGAAC AAGGATGGAAACATCCTCCTCGCCCTTTCTGGCAAGTCTGCCACCTCCAGCGCCATCAGCTCCCTTCTCCTCGAA CTCGATATTCACCTATCCAACGATCGCTCACAAGTTGTTGTCGACCACTTCAACTATGACACCCTCTCGGCCGCT GAGAAGCATGACGTTCTTGTCCTGCAGCGCCCTGGACCCCTCCGTTCTGACGTCAAGGCCTTCTTTGATGGTGAG GGTGTTCTTGCTCTCCCTCGAGTTGCTCCCCAGACTCTCGGTGACAGCGCCCTGCTCTCTCCGATTCTCAAGGCC CCCGCCACTGCCTACAGCTACAACCCCAAGGAGGGCACGCCCGCGCCGGAGGATATCCTGGCTACCGGGTCGCAG CTGAATATCATTTCCGCTATGCAGGCACGTAACTCTGCCCGCTTCACTGTTCTCGGATCAGTGGAGTCGCTGGAG GACAAGTGGTTCTCGGCCTCCGTCAAGACGCCCAGCGGCAAGAAGACACCTACCGTGAACCGCGAGTTCGCCAAG CAGTTGACTGCTTGGGCTTTCAAGGAGACTGGTGTCCTGAAGGTTGACAAGGTCGAGCATCGCCTTATCACTGAG GGCGCAGAGTTGAACCCCTCGATCTACCGGATCAAGAACGAGACTATCTACAGCATTGAGATTTCCGAGTATGTC TACGATAAGTGGGTTCCCTTTGAACTACCTGGAGACGACGCGCTCCAGCTCGAGTTCACCATGCTCTCGCCCTTC CACCGCCTGAACCTGGAACCGGTCGAGCGCACCGATTCCAGCACTGTGTTCAGCACTCAGTTCGTGACTCCCGAT CAACACGGAATCTTCTCCTTCCGCGTCAACTACAAGCGTCCCTTCTTGACCGCCATCGAGGAGAAGCTTGAGGTT ACCAACCGCCACTTCGCGCACGACGAGTACCCGCGCAGCTGGGCTATTACCGGCGGCTGGGTATGGATTGCCGGT CTTTGGTCGGTAATTGGAGGATTCTTGGCTTTCGTGGTTGTCTGGCTCTACTCTGCCCCTGTGGCCGATAAGCTC AAGAAGACTCAGTAG |
| Transcript | >Pro_DTO070G2_2|g6182.t1 ATGAGGTGGTGTCTTGCGTTGCTTATTTGTTGCTTCTTGGCTGCGGTAAATGCGCTGAGTAGCTCCGGCAGTCGC CTGTTGGCTATTTTGGAAGATACAGAACAAAAGGACCTGTACTCCACGTTGTGGGCAGACCTAGAAGCACGAGGA TACGATGTCTCAATCGAATCTTCCAAGAGTGAACAGCTTGCCTTGTTCAAGCTTGGCGAAAGAGCTTACGACCAC CTTCTAATCTTCCCTCCCAAGTCAAAAGGCCTCGGCCCCTCCTTGACCCCCAAACACATCGTCGACTTTATGAAC AAGGATGGAAACATCCTCCTCGCCCTTTCTGGCAAGTCTGCCACCTCCAGCGCCATCAGCTCCCTTCTCCTCGAA CTCGATATTCACCTATCCAACGATCGCTCACAAGTTGTTGTCGACCACTTCAACTATGACACCCTCTCGGCCGCT GAGAAGCATGACGTTCTTGTCCTGCAGCGCCCTGGACCCCTCCGTTCTGACGTCAAGGCCTTCTTTGATGGTGAG GGTGTTCTTGCTCTCCCTCGAGTTGCTCCCCAGACTCTCGGTGACAGCGCCCTGCTCTCTCCGATTCTCAAGGCC CCCGCCACTGCCTACAGCTACAACCCCAAGGAGGGCACGCCCGCGCCGGAGGATATCCTGGCTACCGGGTCGCAG CTGAATATCATTTCCGCTATGCAGGCACGTAACTCTGCCCGCTTCACTGTTCTCGGATCAGTGGAGTCGCTGGAG GACAAGTGGTTCTCGGCCTCCGTCAAGACGCCCAGCGGCAAGAAGACACCTACCGTGAACCGCGAGTTCGCCAAG CAGTTGACTGCTTGGGCTTTCAAGGAGACTGGTGTCCTGAAGGTTGACAAGGTCGAGCATCGCCTTATCACTGAG GGCGCAGAGTTGAACCCCTCGATCTACCGGATCAAGAACGAGACTATCTACAGCATTGAGATTTCCGAGTATGTC TACGATAAGTGGGTTCCCTTTGAACTACCTGGAGACGACGCGCTCCAGCTCGAGTTCACCATGCTCTCGCCCTTC CACCGCCTGAACCTGGAACCGGTCGAGCGCACCGATTCCAGCACTGTGTTCAGCACTCAGTTCGTGACTCCCGAT CAACACGGAATCTTCTCCTTCCGCGTCAACTACAAGCGTCCCTTCTTGACCGCCATCGAGGAGAAGCTTGAGGTT ACCAACCGCCACTTCGCGCACGACGAGTACCCGCGCAGCTGGGCTATTACCGGCGGCTGGGTATGGATTGCCGGT CTTTGGTCGGTAATTGGAGGATTCTTGGCTTTCGTGGTTGTCTGGCTCTACTCTGCCCCTGTGGCCGATAAGCTC AAGAAGACTCAGTAG |
| Gene | >Pro_DTO070G2_2|g6182.t1 ATGAGGTGGTGTCTTGCGTTGCTTATTTGTTGCTTCTTGGCTGCGGTAAATGCGCTGAGTAGCTCCGGCAGTCGC CTGTTGGCTATTTTGGAAGATACAGAACAAAAGGACCTGTACTCCACGTTGTGGGCAGACCTAGAAGGTAATTAA TCTGACTCAATTTATTGATCCTTTGCTAACTCTCGGACTCCAGCACGAGGATACGATGTCTCAATCGAATCTTCC AAGAGTGAACAGCTTGCCTTGTTCAAGCTTGGCGAAAGAGCTTACGACCACCTTCTAATCTTCCCTCCCAAGTCA AAAGGTGCGCAAACCCGACTATTGATTCGATGTCTAGTCAATTGACCTAAGAATACAGGCCTCGGCCCCTCCTTG ACCCCCAAACACATCGTCGACTTTATGAACAAGGATGGAAACATCCTCCTCGCCCTTTCTGGCAAGTCTGCCACC TCCAGCGCCATCAGCTCCCTTCTCCTCGAACTCGATATTCACCTATCCAACGATCGCTCACAAGTTGTTGTCGAC CACTTCAACTATGACACCCTCTCGGCCGCTGAGAAGCATGACGTTCTTGTCCTGCAGCGCCCTGGACCCCTCCGT TCTGACGTCAAGGCCTTCTTTGATGGTGAGGGTGTTCTTGCTCTCCCTCGAGTTGCTCCCCAGACTCTCGGTGAC AGCGCCCTGCTCTCTCCGATTCTCAAGGCCCCCGCCACTGCCTACAGCTACAACCCCAAGGAGGGCACGCCCGCG CCGGAGGATATCCTGGCTACCGGGTCGCAGCTGAATATCATTTCCGCTATGCAGGCACGTAACTCTGCCCGCTTC ACTGTTCTCGGATCAGTGGAGTCGCTGGAGGACAAGTGGTTCTCGGCCTCCGTCAAGACGCCCAGCGGCAAGAAG ACACCTACCGTGAACCGCGAGTTCGCCAAGCAGTTGACTGCTTGGGCTTTCAAGGAGACTGGTGTCCTGAAGGTT GACAAGGTCGAGCATCGCCTTATCACTGAGGGCGCAGAGTTGAACCCCTCGATCTACCGGATCAAGAACGAGACT GTACGTGAAACAATATATTGTCATTCTCTTCCAAGCTAACATGAGCCTTATTTGCCTGCAGATCTACAGCATTGA GATTTCCGAGTATGTCTACGATAAGTGGGTTCCCTTTGAACTACCTGGAGACGACGCGCTCCAGCTCGAGTTCAC CATGCTCTCGCCCTTCCACCGCCTGAACCTGGAACCGGTCGAGCGCACCGATTCCAGCACTGTGTTCAGCACTCA GTTCGTGACTCCCGATCAACACGGAATCTTCTCCTTCCGCGTCAACTACAAGCGTCCCTTCTTGACCGCCATCGA GGAGAAGCTTGAGGTTACCAACCGCCACTTCGCGCACGACGAGTACCCGCGCAGCTGGGCTATTACCGGCGGCTG GGTATGGATTGCCGGTCTTTGGTCGGTAATTGGAGGATTCTTGGCTTTCGTGGTTGTCTGGCTCTACTCTGCCCC TGTGGCCGATAAGCTCAAGAAGACTCAGTAG |