© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Pro_DTO070G2_2|g6099.t1 |
| Gene name | |
| Location | scaffold_08:674740..677242 |
| Strand | + |
| Gene length (bp) | 2502 |
| Transcript length (bp) | 2502 |
| Coding sequence length (bp) | 2502 |
| Protein length (aa) | 834 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF07488 | Glyco_hydro_67M | Glycosyl hydrolase family 67 middle domain | 1.2E-149 | 143 | 461 |
| PF07477 | Glyco_hydro_67C | Glycosyl hydrolase family 67 C-terminus | 1.1E-92 | 463 | 685 |
| PF03648 | Glyco_hydro_67N | Glycosyl hydrolase family 67 N-terminus | 3.1E-32 | 21 | 135 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0005576 | extracellular region | Yes |
| GO:0046559 | alpha-glucuronidase activity | Yes |
| GO:0045493 | xylan catabolic process | Yes |
| GO:0044347 | cell wall polysaccharide catabolic process | No |
| GO:0044262 | cellular carbohydrate metabolic process | No |
| GO:0009057 | macromolecule catabolic process | No |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds | No |
| GO:0044264 | cellular polysaccharide metabolic process | No |
| GO:0008152 | metabolic process | No |
| GO:0005575 | cellular_component | No |
| GO:0044248 | cellular catabolic process | No |
| GO:0009987 | cellular process | No |
| GO:0000272 | polysaccharide catabolic process | No |
| GO:0044036 | cell wall macromolecule metabolic process | No |
| GO:0016798 | hydrolase activity, acting on glycosyl bonds | No |
| GO:0010410 | hemicellulose metabolic process | No |
| GO:0016052 | carbohydrate catabolic process | No |
| GO:0044238 | primary metabolic process | No |
| GO:1901575 | organic substance catabolic process | No |
| GO:0005976 | polysaccharide metabolic process | No |
| GO:0003824 | catalytic activity | No |
| GO:0044237 | cellular metabolic process | No |
| GO:0010383 | cell wall polysaccharide metabolic process | No |
| GO:0044265 | cellular macromolecule catabolic process | No |
| GO:0044260 | cellular macromolecule metabolic process | No |
| GO:0071704 | organic substance metabolic process | No |
| GO:0005975 | carbohydrate metabolic process | No |
| GO:0008150 | biological_process | No |
| GO:0009056 | catabolic process | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0016787 | hydrolase activity | No |
| GO:0016998 | cell wall macromolecule catabolic process | No |
| GO:0003674 | molecular_function | No |
| GO:0043170 | macromolecule metabolic process | No |
| GO:0045491 | xylan metabolic process | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| Yes | 1 - 16 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Pro_DTO070G2_2|g6099.t1 MRTLLFFVSLGFAAAENGLNGWLRYASLPCSGQCHYNLPSSISILNATETSPVYVAGTELQNGLKGIYGKSVQVT HNCNISSVVVGTVDQYRKSCGAVNSVPELEEDGFWLDTKGGNVQILGQNERGALYGTFEYLSMLAQGNFSKVAYA TNPSAPIRWVNQWDNMDGRIERGYGGPSIFFKDGQIVDDLTRVAEYARLLASIRINAVVINNVNADATLLNPTNL DGVARIADVFRPYGIQVGLSLNFASPQTYGGLSTFDPLDTSVIAWWSNITTQIYDLVPDMAGYLVKADSEGQPGP QTYNRTLADAANLFAKEVQPYGGIVMYRAFVYNQLNESVWTDDRAKAAVEFFKDLDGEFDDNVVIQIKYGPIDFQ IREPASALFANLFNTSMAIELQVTQEYLGQQSHLVYIAPLWKTILDTDLRVDHQPSLVRDIVAGKRFNRRLGGSA AVVNVGTNTTWLGSHLSMSNLYAYGRLAWNPADDAQDILQDWIRLTFGLDRKVLGTITRMSMESWPAYEQYSGNL GIQTLTDILYTHYGPSPASQDNNGWGQWTRADQTSIGMDRTVANGTGFSGQYPDEIAAMYENIETTPDDLLLWFH HVKYTHRLHSGKTVIQHFYDEHYRGAETAQTFLTQWKSLHGKIDTERYNHVRHFLDYQSGHSIVWRDAINDFYYN LSGIPDESKRAGHHPWRIEAEDMELDGYEAYTVSPFETASGSVAIVTTSNNTAGTASTKIKFPSGTYDLAVNYYD VYGGQSRWKIYLNDHEIGQWVGNSEDVLSHTPSIYLDGHSAIRIKFRGVKIHKGNTLKIVGMPNGTEFAPLDYVA LLPAGIVD* |
| Coding | >Pro_DTO070G2_2|g6099.t1 ATGCGTACACTTCTCTTTTTTGTCTCCTTGGGCTTTGCAGCCGCTGAGAATGGCCTCAATGGCTGGCTGCGGTAC GCATCATTACCCTGTTCAGGCCAATGTCATTACAATCTCCCTTCCAGTATCAGCATCCTCAATGCGACTGAGACA AGTCCGGTGTATGTTGCAGGGACGGAGTTGCAGAATGGTCTCAAGGGTATTTATGGGAAGAGTGTGCAAGTCACA CACAACTGCAATATATCCTCAGTCGTTGTTGGCACGGTTGATCAATATCGCAAAAGCTGTGGCGCTGTGAACAGT GTACCTGAACTGGAAGAAGATGGCTTTTGGCTCGACACGAAAGGGGGCAATGTCCAAATCCTTGGACAAAATGAG AGAGGTGCTCTCTATGGCACCTTTGAATACTTGTCGATGCTTGCTCAGGGAAACTTCTCCAAGGTCGCCTATGCA ACCAATCCTTCTGCACCGATTCGCTGGGTGAATCAATGGGACAACATGGATGGAAGAATCGAACGCGGCTATGGC GGCCCCTCTATCTTCTTCAAGGACGGTCAAATCGTCGACGACCTAACCCGTGTTGCTGAATACGCCCGCCTTTTG GCCTCGATCAGAATCAATGCTGTCGTCATTAACAATGTCAATGCGGATGCTACCCTCTTGAATCCCACAAACCTC GACGGGGTGGCTCGAATTGCTGATGTCTTCCGTCCATACGGTATACAAGTTGGTCTATCGCTCAATTTCGCATCC CCTCAGACTTATGGAGGGCTCAGCACTTTCGATCCCCTCGATACATCTGTCATCGCGTGGTGGTCGAATATTACG ACTCAAATCTATGATCTAGTTCCTGACATGGCTGGGTACCTCGTCAAGGCTGACTCGGAGGGACAGCCAGGCCCC CAGACATATAACAGGACCCTCGCAGATGCAGCGAATCTTTTCGCCAAAGAAGTCCAGCCCTACGGTGGCATTGTC ATGTATCGTGCGTTTGTCTACAATCAGCTGAACGAATCAGTCTGGACGGATGATCGTGCGAAGGCTGCCGTGGAA TTTTTCAAGGATCTAGATGGAGAGTTTGACGACAACGTGGTGATCCAGATCAAATACGGCCCTATCGATTTCCAG ATCCGTGAGCCAGCATCGGCATTGTTTGCAAATTTGTTCAATACCAGTATGGCCATTGAACTACAGGTTACGCAG GAATACCTTGGGCAACAGTCGCATTTGGTCTATATTGCTCCTCTTTGGAAGACCATATTAGACACCGACCTCCGT GTCGACCACCAGCCATCATTGGTTCGCGATATCGTGGCTGGTAAACGGTTCAATCGCAGACTAGGCGGATCAGCA GCTGTTGTCAATGTAGGCACAAACACCACCTGGCTTGGTAGCCACCTGTCCATGTCAAACCTATATGCTTATGGT CGCTTGGCTTGGAACCCGGCAGACGATGCCCAGGACATTCTGCAAGACTGGATCAGACTGACCTTTGGGCTGGAC CGCAAGGTACTCGGCACCATCACTCGGATGTCAATGGAATCTTGGCCTGCCTACGAACAATACAGTGGGAATTTG GGCATCCAGACCTTGACAGATATTCTATACACTCACTACGGTCCCAGCCCTGCCTCCCAAGACAACAATGGCTGG GGCCAATGGACCCGCGCTGACCAAACCAGCATTGGAATGGATCGGACGGTGGCAAACGGCACAGGTTTTTCAGGC CAATATCCGGATGAAATCGCTGCCATGTATGAGAACATCGAGACCACCCCAGACGATCTCCTACTCTGGTTCCAC CATGTGAAATACACTCACCGTCTGCACTCGGGCAAGACCGTTATTCAGCACTTCTACGACGAGCACTACCGCGGA GCCGAGACTGCACAGACCTTCCTTACGCAGTGGAAATCGCTTCATGGCAAAATTGATACTGAGCGATACAACCAT GTTCGGCACTTCCTAGACTACCAGAGCGGCCACTCGATTGTATGGAGAGATGCAATCAATGACTTTTATTACAAT CTTTCTGGAATCCCTGACGAGTCCAAGCGGGCCGGCCATCACCCGTGGCGTATCGAAGCGGAAGATATGGAGTTA GATGGCTACGAAGCTTACACCGTCAGCCCCTTCGAAACAGCCTCGGGCTCAGTTGCAATTGTTACAACTTCCAAC AATACAGCTGGCACCGCTTCAACCAAAATAAAATTTCCCTCTGGCACCTATGACCTTGCTGTGAATTACTACGAT GTATACGGCGGCCAGTCACGGTGGAAGATCTATCTGAATGATCACGAAATCGGCCAATGGGTTGGTAATAGTGAA GATGTCTTGAGCCACACACCTTCTATCTATTTAGATGGACATTCGGCGATTCGTATCAAGTTCCGGGGTGTCAAG ATTCATAAGGGTAATACCTTGAAGATTGTCGGTATGCCTAATGGCACTGAGTTCGCGCCATTGGACTATGTGGCT TTGCTGCCAGCGGGTATTGTAGATTAG |
| Transcript | >Pro_DTO070G2_2|g6099.t1 ATGCGTACACTTCTCTTTTTTGTCTCCTTGGGCTTTGCAGCCGCTGAGAATGGCCTCAATGGCTGGCTGCGGTAC GCATCATTACCCTGTTCAGGCCAATGTCATTACAATCTCCCTTCCAGTATCAGCATCCTCAATGCGACTGAGACA AGTCCGGTGTATGTTGCAGGGACGGAGTTGCAGAATGGTCTCAAGGGTATTTATGGGAAGAGTGTGCAAGTCACA CACAACTGCAATATATCCTCAGTCGTTGTTGGCACGGTTGATCAATATCGCAAAAGCTGTGGCGCTGTGAACAGT GTACCTGAACTGGAAGAAGATGGCTTTTGGCTCGACACGAAAGGGGGCAATGTCCAAATCCTTGGACAAAATGAG AGAGGTGCTCTCTATGGCACCTTTGAATACTTGTCGATGCTTGCTCAGGGAAACTTCTCCAAGGTCGCCTATGCA ACCAATCCTTCTGCACCGATTCGCTGGGTGAATCAATGGGACAACATGGATGGAAGAATCGAACGCGGCTATGGC GGCCCCTCTATCTTCTTCAAGGACGGTCAAATCGTCGACGACCTAACCCGTGTTGCTGAATACGCCCGCCTTTTG GCCTCGATCAGAATCAATGCTGTCGTCATTAACAATGTCAATGCGGATGCTACCCTCTTGAATCCCACAAACCTC GACGGGGTGGCTCGAATTGCTGATGTCTTCCGTCCATACGGTATACAAGTTGGTCTATCGCTCAATTTCGCATCC CCTCAGACTTATGGAGGGCTCAGCACTTTCGATCCCCTCGATACATCTGTCATCGCGTGGTGGTCGAATATTACG ACTCAAATCTATGATCTAGTTCCTGACATGGCTGGGTACCTCGTCAAGGCTGACTCGGAGGGACAGCCAGGCCCC CAGACATATAACAGGACCCTCGCAGATGCAGCGAATCTTTTCGCCAAAGAAGTCCAGCCCTACGGTGGCATTGTC ATGTATCGTGCGTTTGTCTACAATCAGCTGAACGAATCAGTCTGGACGGATGATCGTGCGAAGGCTGCCGTGGAA TTTTTCAAGGATCTAGATGGAGAGTTTGACGACAACGTGGTGATCCAGATCAAATACGGCCCTATCGATTTCCAG ATCCGTGAGCCAGCATCGGCATTGTTTGCAAATTTGTTCAATACCAGTATGGCCATTGAACTACAGGTTACGCAG GAATACCTTGGGCAACAGTCGCATTTGGTCTATATTGCTCCTCTTTGGAAGACCATATTAGACACCGACCTCCGT GTCGACCACCAGCCATCATTGGTTCGCGATATCGTGGCTGGTAAACGGTTCAATCGCAGACTAGGCGGATCAGCA GCTGTTGTCAATGTAGGCACAAACACCACCTGGCTTGGTAGCCACCTGTCCATGTCAAACCTATATGCTTATGGT CGCTTGGCTTGGAACCCGGCAGACGATGCCCAGGACATTCTGCAAGACTGGATCAGACTGACCTTTGGGCTGGAC CGCAAGGTACTCGGCACCATCACTCGGATGTCAATGGAATCTTGGCCTGCCTACGAACAATACAGTGGGAATTTG GGCATCCAGACCTTGACAGATATTCTATACACTCACTACGGTCCCAGCCCTGCCTCCCAAGACAACAATGGCTGG GGCCAATGGACCCGCGCTGACCAAACCAGCATTGGAATGGATCGGACGGTGGCAAACGGCACAGGTTTTTCAGGC CAATATCCGGATGAAATCGCTGCCATGTATGAGAACATCGAGACCACCCCAGACGATCTCCTACTCTGGTTCCAC CATGTGAAATACACTCACCGTCTGCACTCGGGCAAGACCGTTATTCAGCACTTCTACGACGAGCACTACCGCGGA GCCGAGACTGCACAGACCTTCCTTACGCAGTGGAAATCGCTTCATGGCAAAATTGATACTGAGCGATACAACCAT GTTCGGCACTTCCTAGACTACCAGAGCGGCCACTCGATTGTATGGAGAGATGCAATCAATGACTTTTATTACAAT CTTTCTGGAATCCCTGACGAGTCCAAGCGGGCCGGCCATCACCCGTGGCGTATCGAAGCGGAAGATATGGAGTTA GATGGCTACGAAGCTTACACCGTCAGCCCCTTCGAAACAGCCTCGGGCTCAGTTGCAATTGTTACAACTTCCAAC AATACAGCTGGCACCGCTTCAACCAAAATAAAATTTCCCTCTGGCACCTATGACCTTGCTGTGAATTACTACGAT GTATACGGCGGCCAGTCACGGTGGAAGATCTATCTGAATGATCACGAAATCGGCCAATGGGTTGGTAATAGTGAA GATGTCTTGAGCCACACACCTTCTATCTATTTAGATGGACATTCGGCGATTCGTATCAAGTTCCGGGGTGTCAAG ATTCATAAGGGTAATACCTTGAAGATTGTCGGTATGCCTAATGGCACTGAGTTCGCGCCATTGGACTATGTGGCT TTGCTGCCAGCGGGTATTGTAGATTAG |
| Gene | >Pro_DTO070G2_2|g6099.t1 ATGCGTACACTTCTCTTTTTTGTCTCCTTGGGCTTTGCAGCCGCTGAGAATGGCCTCAATGGCTGGCTGCGGTAC GCATCATTACCCTGTTCAGGCCAATGTCATTACAATCTCCCTTCCAGTATCAGCATCCTCAATGCGACTGAGACA AGTCCGGTGTATGTTGCAGGGACGGAGTTGCAGAATGGTCTCAAGGGTATTTATGGGAAGAGTGTGCAAGTCACA CACAACTGCAATATATCCTCAGTCGTTGTTGGCACGGTTGATCAATATCGCAAAAGCTGTGGCGCTGTGAACAGT GTACCTGAACTGGAAGAAGATGGCTTTTGGCTCGACACGAAAGGGGGCAATGTCCAAATCCTTGGACAAAATGAG AGAGGTGCTCTCTATGGCACCTTTGAATACTTGTCGATGCTTGCTCAGGGAAACTTCTCCAAGGTCGCCTATGCA ACCAATCCTTCTGCACCGATTCGCTGGGTGAATCAATGGGACAACATGGATGGAAGAATCGAACGCGGCTATGGC GGCCCCTCTATCTTCTTCAAGGACGGTCAAATCGTCGACGACCTAACCCGTGTTGCTGAATACGCCCGCCTTTTG GCCTCGATCAGAATCAATGCTGTCGTCATTAACAATGTCAATGCGGATGCTACCCTCTTGAATCCCACAAACCTC GACGGGGTGGCTCGAATTGCTGATGTCTTCCGTCCATACGGTATACAAGTTGGTCTATCGCTCAATTTCGCATCC CCTCAGACTTATGGAGGGCTCAGCACTTTCGATCCCCTCGATACATCTGTCATCGCGTGGTGGTCGAATATTACG ACTCAAATCTATGATCTAGTTCCTGACATGGCTGGGTACCTCGTCAAGGCTGACTCGGAGGGACAGCCAGGCCCC CAGACATATAACAGGACCCTCGCAGATGCAGCGAATCTTTTCGCCAAAGAAGTCCAGCCCTACGGTGGCATTGTC ATGTATCGTGCGTTTGTCTACAATCAGCTGAACGAATCAGTCTGGACGGATGATCGTGCGAAGGCTGCCGTGGAA TTTTTCAAGGATCTAGATGGAGAGTTTGACGACAACGTGGTGATCCAGATCAAATACGGCCCTATCGATTTCCAG ATCCGTGAGCCAGCATCGGCATTGTTTGCAAATTTGTTCAATACCAGTATGGCCATTGAACTACAGGTTACGCAG GAATACCTTGGGCAACAGTCGCATTTGGTCTATATTGCTCCTCTTTGGAAGACCATATTAGACACCGACCTCCGT GTCGACCACCAGCCATCATTGGTTCGCGATATCGTGGCTGGTAAACGGTTCAATCGCAGACTAGGCGGATCAGCA GCTGTTGTCAATGTAGGCACAAACACCACCTGGCTTGGTAGCCACCTGTCCATGTCAAACCTATATGCTTATGGT CGCTTGGCTTGGAACCCGGCAGACGATGCCCAGGACATTCTGCAAGACTGGATCAGACTGACCTTTGGGCTGGAC CGCAAGGTACTCGGCACCATCACTCGGATGTCAATGGAATCTTGGCCTGCCTACGAACAATACAGTGGGAATTTG GGCATCCAGACCTTGACAGATATTCTATACACTCACTACGGTCCCAGCCCTGCCTCCCAAGACAACAATGGCTGG GGCCAATGGACCCGCGCTGACCAAACCAGCATTGGAATGGATCGGACGGTGGCAAACGGCACAGGTTTTTCAGGC CAATATCCGGATGAAATCGCTGCCATGTATGAGAACATCGAGACCACCCCAGACGATCTCCTACTCTGGTTCCAC CATGTGAAATACACTCACCGTCTGCACTCGGGCAAGACCGTTATTCAGCACTTCTACGACGAGCACTACCGCGGA GCCGAGACTGCACAGACCTTCCTTACGCAGTGGAAATCGCTTCATGGCAAAATTGATACTGAGCGATACAACCAT GTTCGGCACTTCCTAGACTACCAGAGCGGCCACTCGATTGTATGGAGAGATGCAATCAATGACTTTTATTACAAT CTTTCTGGAATCCCTGACGAGTCCAAGCGGGCCGGCCATCACCCGTGGCGTATCGAAGCGGAAGATATGGAGTTA GATGGCTACGAAGCTTACACCGTCAGCCCCTTCGAAACAGCCTCGGGCTCAGTTGCAATTGTTACAACTTCCAAC AATACAGCTGGCACCGCTTCAACCAAAATAAAATTTCCCTCTGGCACCTATGACCTTGCTGTGAATTACTACGAT GTATACGGCGGCCAGTCACGGTGGAAGATCTATCTGAATGATCACGAAATCGGCCAATGGGTTGGTAATAGTGAA GATGTCTTGAGCCACACACCTTCTATCTATTTAGATGGACATTCGGCGATTCGTATCAAGTTCCGGGGTGTCAAG ATTCATAAGGGTAATACCTTGAAGATTGTCGGTATGCCTAATGGCACTGAGTTCGCGCCATTGGACTATGTGGCT TTGCTGCCAGCGGGTATTGTAGATTAG |