Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO070G2_2|g590.t1
Gene name
Locationscaffold_01:1542200..1543849
Strand+
Gene length (bp)1649
Transcript length (bp)1071
Coding sequence length (bp)1071
Protein length (aa) 357

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF04045 P34-Arc Arp2/3 complex, 34 kD subunit p34-Arc 1.5E-109 52 302

GO

GO Term Description Terminal node
GO:0015629 actin cytoskeleton Yes
GO:0005885 Arp2/3 protein complex Yes
GO:0034314 Arp2/3 complex-mediated actin nucleation Yes
GO:0030833 regulation of actin filament polymerization Yes
GO:0009987 cellular process No
GO:0032535 regulation of cellular component size No
GO:0008150 biological_process No
GO:0043232 intracellular non-membrane-bounded organelle No
GO:0032970 regulation of actin filament-based process No
GO:0016043 cellular component organization No
GO:0005575 cellular_component No
GO:0032956 regulation of actin cytoskeleton organization No
GO:0044087 regulation of cellular component biogenesis No
GO:0065008 regulation of biological quality No
GO:0043254 regulation of protein-containing complex assembly No
GO:0045010 actin nucleation No
GO:0043228 non-membrane-bounded organelle No
GO:0032991 protein-containing complex No
GO:0097435 supramolecular fiber organization No
GO:0030832 regulation of actin filament length No
GO:0032271 regulation of protein polymerization No
GO:0090066 regulation of anatomical structure size No
GO:0065007 biological regulation No
GO:0110053 regulation of actin filament organization No
GO:0050789 regulation of biological process No
GO:0051493 regulation of cytoskeleton organization No
GO:0043229 intracellular organelle No
GO:0007015 actin filament organization No
GO:0005856 cytoskeleton No
GO:0050794 regulation of cellular process No
GO:0071840 cellular component organization or biogenesis No
GO:0008064 regulation of actin polymerization or depolymerization No
GO:0033043 regulation of organelle organization No
GO:0110165 cellular anatomical entity No
GO:0051128 regulation of cellular component organization No
GO:0043226 organelle No
GO:1902903 regulation of supramolecular fiber organization No

Deeploc

Deeploc data not available for this genome

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID2
Orthogroup3412
Change Orthofinder run
Species Protein ID
Penicillium roqueforti DTO002I6 Pro_DTO002I6_2|g3887.t1
Penicillium roqueforti DTO003C3 Pro_DTO003C3_2|g690.t1
Penicillium roqueforti DTO003H1 (CBS 147308) Pro_DTO003H1_2|g1239.t1
Penicillium roqueforti DTO006G1 Pro_DTO006G1_2|g8972.t1
Penicillium roqueforti DTO006G7 Pro_DTO006G7_3|g9036.t1
Penicillium roqueforti DTO012A1 Pro_DTO012A1_2|g4780.t1
Penicillium roqueforti DTO012A2 (CBS 147309) Pro_DTO012A2_2|g218.t1
Penicillium roqueforti DTO012A6 (CBS 147310) Pro_DTO012A6_2|g4643.t1
Penicillium roqueforti DTO012A7 Pro_DTO012A7_2|g6226.t1
Penicillium roqueforti DTO012A8 Pro_DTO012A8_2|g1110.t1
Penicillium roqueforti DTO012A9 Pro_DTO012A9_2|g3074.t1
Penicillium roqueforti DTO013E5 Pro_DTO013E5_2|g2007.t1
Penicillium roqueforti DTO013F2 Pro_DTO013F2_2|g5399.t1
Penicillium roqueforti DTO013F5 (CBS 147311) Pro_DTO013F5_2|g4144.t1
Penicillium roqueforti DTO027I6 Pro_DTO027I6_2|g2946.t1
Penicillium roqueforti DTO032C6 Pro_DTO032C6_2|g1539.t1
Penicillium roqueforti DTO039G3 Pro_DTO039G3_2|g5889.t1
Penicillium roqueforti DTO046C5 Pro_DTO046C5_2|g6492.t1
Penicillium roqueforti DTO070G2 (CBS 147317) Pro_DTO070G2_2|g590.t1 (this protein)
Penicillium roqueforti DTO081F9 (CBS 147318) Pro_DTO081F9_2|g646.t1
Penicillium roqueforti DTO101D6 (CBS 147325) Pro_DTO101D6_2|g1430.t1
Penicillium roqueforti DTO102I9 (CBS 147326) Pro_DTO102I9_2|g5435.t1
Penicillium roqueforti DTO126G2 (CBS 147330) Pro_DTO126G2_2|g4242.t1
Penicillium roqueforti DTO127F7 (CBS 147331) Pro_DTO127F7_2|g5721.t1
Penicillium roqueforti DTO127F9 (CBS 147332) Pro_DTO127F9_2|g4068.t1
Penicillium roqueforti DTO130C1 (CBS 147333) Pro_DTO130C1_2|g1098.t1
Penicillium roqueforti DTO163C3 (CBS 147337) Pro_DTO163C3_2|g3588.t1
Penicillium roqueforti DTO163F5 (CBS 147338) Pro_DTO163F5_2|g1139.t1
Penicillium roqueforti DTO163G4 (CBS 147339) Pro_DTO163G4_2|g1147.t1
Penicillium roqueforti DTO265D5 (CBS 147372) Pro_DTO265D5_2|g7072.t1
Penicillium roqueforti DTO369A1 (CBS 147354) Pro_DTO369A1_2|g4795.t1
Penicillium roqueforti DTO375B1 (CBS 147355) Pro_DTO375B1_2|g6577.t1
Penicillium roqueforti DTO377G2 (LCP 96.3914a) Pro_DTO377G2_2|g3799.t1
Penicillium roqueforti LCP96 04111 Pro_DTO377G3_2|g1013.t1

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO070G2_2|g590.t1
MLLLDYQNALIQSLLTERFSGAPPTSIDQVVSDFDGVTFHLSTPESKTKILISINVKCYKELVQYGAQEVLEREY
GPYIVSPEPGYDFSVQIDLENLPAEEEARNDLIMNLALLKRNAMAAPFEKAFDEFNKLAEEASRYTSESAPQGIQ
EGGEVMAIHYREEEAIYIKANWDRVTVIFSTVFREETDRIFGKVFLQEFVDARRRVLTLQNAPQVLFRNDPPLEL
ANVPGLNATGGEVSYVTFVLFPRHLTPQRRYENISHIQTFRDYFHYHIKASKAYIHTRMRKRTADFLQVLNRARP
ENEERERKTASGPCGIELRRSPDFQPLKHPAGETSALQMRPHEHQVMMSGILASLR*
Coding >Pro_DTO070G2_2|g590.t1
ATGCTTCTCTTAGATTACCAGAATGCTTTGATCCAGTCACTCCTTACGGAGCGCTTTTCTGGAGCACCCCCAACC
TCCATTGACCAAGTGGTTTCCGACTTCGACGGTGTGACATTTCACCTTTCTACCCCCGAGTCTAAGACCAAGATT
CTCATCTCGATCAATGTGAAATGCTACAAGGAACTGGTCCAGTATGGAGCTCAGGAGGTGTTGGAGAGAGAATAC
GGTCCTTATATTGTATCTCCGGAGCCTGGCTATGATTTCTCGGTACAAATCGATCTTGAAAACCTGCCCGCAGAG
GAGGAGGCCCGAAATGACCTGATTATGAACCTTGCCCTCCTGAAACGGAATGCAATGGCTGCTCCCTTTGAGAAA
GCATTCGACGAATTCAACAAGCTCGCCGAGGAGGCTTCCAGGTACACCTCAGAGTCAGCACCACAGGGTATCCAG
GAGGGCGGTGAAGTTATGGCTATTCACTACCGTGAAGAGGAGGCCATCTATATCAAGGCCAACTGGGACCGAGTC
ACAGTGATCTTCAGCACCGTATTCCGCGAGGAGACAGACCGGATCTTTGGCAAGGTCTTCCTGCAGGAATTCGTC
GACGCCCGGCGACGTGTCTTGACACTCCAGAACGCCCCCCAGGTCCTGTTCCGTAACGACCCTCCTCTTGAGCTT
GCAAACGTTCCTGGTCTGAATGCTACTGGAGGCGAAGTTAGCTATGTCACCTTCGTTCTTTTCCCTCGACACCTG
ACCCCGCAGCGTCGTTATGAAAACATCTCTCACATCCAGACCTTCCGTGATTATTTCCACTACCACATCAAAGCC
TCAAAGGCCTACATCCACACTCGAATGAGGAAGCGGACAGCGGATTTCCTCCAGGTGCTCAACCGAGCCCGGCCA
GAGAATGAAGAACGTGAGCGCAAGACTGCTAGTGGTCCATGTGGTATTGAACTGCGTCGATCTCCAGATTTTCAG
CCTCTGAAGCACCCGGCTGGGGAAACATCAGCCTTACAGATGAGGCCCCACGAGCACCAGGTGATGATGTCCGGT
ATCCTTGCTTCACTTCGTTGA
Transcript >Pro_DTO070G2_2|g590.t1
ATGCTTCTCTTAGATTACCAGAATGCTTTGATCCAGTCACTCCTTACGGAGCGCTTTTCTGGAGCACCCCCAACC
TCCATTGACCAAGTGGTTTCCGACTTCGACGGTGTGACATTTCACCTTTCTACCCCCGAGTCTAAGACCAAGATT
CTCATCTCGATCAATGTGAAATGCTACAAGGAACTGGTCCAGTATGGAGCTCAGGAGGTGTTGGAGAGAGAATAC
GGTCCTTATATTGTATCTCCGGAGCCTGGCTATGATTTCTCGGTACAAATCGATCTTGAAAACCTGCCCGCAGAG
GAGGAGGCCCGAAATGACCTGATTATGAACCTTGCCCTCCTGAAACGGAATGCAATGGCTGCTCCCTTTGAGAAA
GCATTCGACGAATTCAACAAGCTCGCCGAGGAGGCTTCCAGGTACACCTCAGAGTCAGCACCACAGGGTATCCAG
GAGGGCGGTGAAGTTATGGCTATTCACTACCGTGAAGAGGAGGCCATCTATATCAAGGCCAACTGGGACCGAGTC
ACAGTGATCTTCAGCACCGTATTCCGCGAGGAGACAGACCGGATCTTTGGCAAGGTCTTCCTGCAGGAATTCGTC
GACGCCCGGCGACGTGTCTTGACACTCCAGAACGCCCCCCAGGTCCTGTTCCGTAACGACCCTCCTCTTGAGCTT
GCAAACGTTCCTGGTCTGAATGCTACTGGAGGCGAAGTTAGCTATGTCACCTTCGTTCTTTTCCCTCGACACCTG
ACCCCGCAGCGTCGTTATGAAAACATCTCTCACATCCAGACCTTCCGTGATTATTTCCACTACCACATCAAAGCC
TCAAAGGCCTACATCCACACTCGAATGAGGAAGCGGACAGCGGATTTCCTCCAGGTGCTCAACCGAGCCCGGCCA
GAGAATGAAGAACGTGAGCGCAAGACTGCTAGTGGTCCATGTGGTATTGAACTGCGTCGATCTCCAGATTTTCAG
CCTCTGAAGCACCCGGCTGGGGAAACATCAGCCTTACAGATGAGGCCCCACGAGCACCAGGTGATGATGTCCGGT
ATCCTTGCTTCACTTCGTTGA
Gene >Pro_DTO070G2_2|g590.t1
ATGCTTCTCTTAGATTACCAGAATGCTTTGATCCAGTCACTCCTTACGGAGCGCTTTTCTGGGTATGTTTTATTC
CTCCCCCTCGGCATGCGATCCTGCGCATTGTATACACAACCCCGAAGCAGGCACCCAGCTAACATGCCGAACTCA
GAGCACCCCCAACCTCCATTGACCAAGTGGTTTCCGACTTCGACGGTGTGACATTTCACCTTTCTACCCCCGAGT
CTAAGACCAAGATTCTCATCTCGATCAATGTGAAATGCTACAAGGAACTGGTCCAGTATGGAGCTCAGGAGGTGT
TGGAGAGAGAATACGGTCCTTATATTGTATCTCCGGAGCCTGGCTATGATTTCTCGGTACAAATCGATCTTGAAA
ACCTGCCCGCAGAGGAGGAGGCCCGAAATGACCTGATTATGAACCTTGCCCTCCTGAAACGGAATGCAATGGCTG
CTCCCTTTGAGAAAGCATTCGACGAATTCAACAAGCTCGCCGAGGAGGCTTCCAGGTACACCTCAGAGTCAGCAC
CACAGGGTATCCAGGAGGGCGGTGAAGTTATGGCTATTCACTACCGTGAAGAGGAGGCCATCTATATCAAGGCCA
ACTGGGACCGAGTCACAGTGATCTTCAGCACCGTATTCCGCGAGGAGACAGACCGGATCTTTGGCAAGGTCTTCC
TGCAGGTTCGTACTTTGCCACAAGTGGTCCATTTATGAGAACCCCTGACTGACAGCCCATAGGAATTCGTCGACG
CCCGGCGACGTGTCTTGACACTCCAGAACGCCCCCCAGGTCCTGTTCCGTAACGACCCTCCTCTTGAGCTTGCAA
ACGTTCCTGGTCTGAATGCTACTGGAGGCGAAGTTAGCTATGTCACCTTCGGTATGGATGCATATTGCGCTATCA
ATCTCCATTTTATTACTGACTCGGCTTGCAGTTCTTTTCCCTCGACACCTGACCCCGCAGCGTCGTTATGAAAAC
ATCTCTCACATCCAGACCTTCCGTGATTATTTCCACTACCACATCAAAGCCTCAAAGGTATGCAGTTTCTCTCGG
TCTTGTTGAGGGATTGATCACTAAACATTTTGCAGGCCTACATCCACACTCGAATGAGGAAGCGGACAGCGGATT
TCCTCCAGGGTATGTATCGTCTGAGCAAAGAAAGCATGTTCACTGCTAACTCGCAACAGTGCTCAACCGAGCCCG
GCCAGAGAATGAAGAACGTGAGCGCAAGACTGCTAGTGGTCGTACGTTCCGAGTGCAGGGTTAGAGCCTTGAGTT
TCTTTGTTTGTATGAGCCAATTCAAGTTTATTGTTATTGTTTATATACTTTTTCCTTGTTCCCATGCTACCTAGC
AGCACATTTGCTCCTAGGCGATCTGGAACGTACACAGGTGGATGTTCATGTTGCCCTCTTAGAAGACAGTCTCCG
GTTCTGATAAGCTGGTAGGGTGGTTGTATATAGCATGTGGTATTGAACTGCGTCGATCTCCAGATTTTCAGCCTC
TGAAGCACCCGGCTGGGGAAACATCAGCCTTACAGGTACGTGGAACCGAGACAAGCCCCGAAAAAGAGCCCAAAG
CTAAGCTCGGGATGAAGATGAGGCCCCACGAGCACCAGGTGATGATGTCCGGTATCCTTGCTTCACTTCGTTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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