Protein ID | Pro_DTO070G2_2|g5820.t1 |
Gene name | |
Location | scaffold_07:1053997..1056688 |
Strand | + |
Gene length (bp) | 2691 |
Transcript length (bp) | 2499 |
Coding sequence length (bp) | 2499 |
Protein length (aa) | 833 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF08238 | Sel1 | Sel1 repeat | 8.5E-05 | 132 | 161 |
PF08238 | Sel1 | Sel1 repeat | 5.3E-03 | 172 | 205 |
PF08238 | Sel1 | Sel1 repeat | 3.5E-03 | 214 | 240 |
PF08238 | Sel1 | Sel1 repeat | 3.3E+00 | 314 | 341 |
PF08238 | Sel1 | Sel1 repeat | 3.9E+00 | 373 | 402 |
PF08238 | Sel1 | Sel1 repeat | 1.4E-05 | 405 | 438 |
PF08238 | Sel1 | Sel1 repeat | 4.3E+00 | 595 | 626 |
PF08238 | Sel1 | Sel1 repeat | 3.6E-02 | 631 | 663 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
Yes | 1 - 21 | 0.45 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 761 | 780 | 19 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Pro_DTO070G2_2|g5820.t1 MRTPLSHFLSALLLLQTCAAGPGQPLTDQTASAATGRDADHEFTFLAGEAEPRPMTQRVENAWNTLRTIKNPVLQ SDKSRGLLGTVTYYGRQTVRLLFLNRPSTEKPEQKINKHLTGAVEELRIAADEDRDPDAMFLLAEMNFYGNFSHP RDFKEAFRWYHELAWLDGNNTAQNMVGFMYATGIGGAVEPDQAKALMYHEFAAETGNIRSEMTLAYRYHTGIGTP KDCDHAIHYYKKVADKAVEYYRSGPPGGRSMVRESYRWADEEGGVYGPGASVSSSGQNARDAANASPEASVEDIL EYLDLMSRKGELKATYTLGKMNFEGARGLPRNFRLAMKHFKVVTKKYWNKDGSVNSNPPAGLDKLASKAAGHIGL MYLRGEGVKQHFPTALTWFRRGITNGDPMCQHWMGLMYLKGYGIPQDAFKASHYFKAAAEQDSPASESRLGALFL DQGDVATATRYFELAARWGWMEAYYYLAEMANFGIGRQRHCGVAAAYYKMVAEKAEIVHSAFVEANAAYETGDKE GALIPSMMAAEQGYENAQANVAYLLDEHRSVLSLNSILPWAEKARSSLMRNARLALIYWTRSSKQANIDSLVKMG DYYLSGTGTPIDADKASTCYHNAAEAHHSAQGYWNLGWMHENGVAVDQDFHMAKRYYDLALDLSPEAYLPVKLSL IKLRARGYWNRITNGDINPIHEEEDSKPRRTFKEWVKAFIENDEDGYYEDLYELQRGDDDEYRGLESEGHEDGYY DDLDLDIDEGMLEGLLIVGLAAALLVLVYYRQQQQRNRQNQNANANANANAPNGDGNANDRGLFPQPGEPDFGQW VAGGVGH* |
Coding | >Pro_DTO070G2_2|g5820.t1 ATGAGGACGCCGCTTTCACACTTTCTCTCGGCCCTGCTGCTATTGCAGACATGCGCAGCTGGGCCTGGTCAGCCG CTTACTGACCAAACAGCGTCCGCGGCAACGGGCCGCGATGCAGACCACGAATTTACGTTCCTGGCAGGGGAAGCA GAACCCCGACCTATGACTCAACGAGTCGAGAATGCCTGGAATACCCTTCGCACAATAAAGAATCCAGTCCTTCAA TCCGACAAGTCGAGAGGATTACTAGGGACGGTCACATACTATGGCCGTCAAACGGTCCGACTGCTATTCTTGAAC CGCCCTTCGACTGAAAAACCCGAGCAGAAAATAAACAAACATCTGACGGGAGCAGTGGAGGAGCTGAGAATAGCT GCAGACGAAGACCGAGACCCGGATGCTATGTTCTTGTTAGCAGAGATGAACTTCTATGGCAACTTCTCCCATCCC CGCGATTTCAAAGAGGCCTTCCGCTGGTACCACGAACTAGCATGGTTGGACGGAAACAACACAGCGCAGAACATG GTCGGGTTCATGTATGCGACGGGCATCGGCGGTGCGGTCGAACCCGACCAGGCAAAGGCCCTGATGTACCACGAA TTTGCAGCGGAAACAGGGAACATTCGCTCGGAGATGACACTTGCGTATCGCTACCACACTGGTATCGGAACGCCG AAGGATTGTGACCATGCGATCCATTACTACAAGAAGGTTGCGGACAAGGCGGTCGAGTACTACCGCTCAGGCCCT CCGGGTGGTAGGTCTATGGTTCGAGAATCTTATCGTTGGGCAGACGAAGAAGGTGGTGTCTACGGTCCAGGAGCC AGTGTGTCGAGCTCGGGTCAAAATGCGCGGGACGCTGCCAATGCCTCTCCTGAGGCCAGCGTGGAAGATATACTA GAATACTTGGATCTCATGTCCCGGAAGGGTGAACTGAAGGCTACATACACCCTCGGTAAGATGAACTTCGAGGGC GCCCGGGGCTTGCCGCGGAATTTCCGACTGGCTATGAAGCATTTCAAGGTTGTTACCAAGAAATATTGGAACAAG GATGGGTCCGTCAACTCAAACCCCCCTGCAGGGCTTGATAAACTGGCATCCAAGGCCGCAGGACATATTGGCCTG ATGTACCTTCGCGGAGAGGGTGTTAAGCAACACTTCCCGACTGCCCTCACATGGTTCCGGAGGGGTATTACGAAC GGGGACCCGATGTGCCAGCATTGGATGGGTCTGATGTATCTCAAGGGCTATGGTATTCCGCAGGATGCCTTCAAG GCATCTCACTACTTCAAAGCAGCGGCAGAGCAGGATTCCCCTGCGTCAGAATCACGATTAGGCGCTCTGTTCTTG GACCAAGGAGATGTGGCAACCGCAACACGTTACTTCGAGCTTGCCGCCCGCTGGGGCTGGATGGAGGCGTACTAT TATCTAGCTGAGATGGCCAACTTCGGTATTGGCAGACAGCGTCACTGTGGTGTGGCCGCTGCCTACTATAAAATG GTTGCCGAAAAAGCAGAGATCGTCCACTCAGCTTTCGTGGAGGCAAACGCTGCTTACGAAACCGGTGATAAGGAG GGCGCTCTCATTCCGTCAATGATGGCAGCCGAGCAAGGCTATGAGAACGCACAGGCAAATGTGGCTTATCTGCTT GATGAGCATCGCTCCGTACTCTCACTAAATTCCATCCTTCCATGGGCTGAGAAGGCTCGATCCTCCTTGATGCGC AATGCGCGACTGGCCTTGATTTATTGGACCCGCTCTTCGAAGCAAGCCAACATCGACTCTTTGGTCAAGATGGGT GACTACTACCTGTCTGGTACTGGTACACCTATCGATGCCGACAAGGCCTCGACCTGTTACCACAATGCTGCTGAA GCCCACCACAGTGCCCAGGGCTACTGGAATTTGGGATGGATGCATGAGAATGGCGTGGCAGTAGATCAGGATTTC CACATGGCCAAGCGATATTATGATTTGGCTCTTGACCTCAGCCCCGAAGCGTATCTGCCAGTGAAGCTCAGCTTG ATCAAACTCCGGGCTCGAGGATACTGGAATCGCATCACTAACGGAGACATTAACCCCATCCATGAGGAGGAAGAC TCGAAGCCCCGTCGTACCTTCAAGGAATGGGTCAAGGCTTTCATCGAGAACGACGAGGATGGCTATTACGAAGAC CTTTATGAACTACAACGGGGTGATGATGATGAATATCGTGGCTTGGAATCCGAAGGCCACGAAGATGGCTACTAT GATGACCTGGACCTTGATATCGACGAGGGAATGCTCGAGGGTCTCCTCATTGTCGGACTGGCTGCTGCGCTGTTG GTTTTGGTATACTACCGTCAGCAGCAGCAGCGCAACCGACAGAACCAGAACGCCAATGCCAACGCTAACGCCAAT GCCCCGAATGGAGATGGGAATGCCAACGACCGTGGATTATTCCCTCAGCCTGGTGAACCTGACTTTGGGCAATGG GTAGCAGGAGGAGTTGGTCATTGA |
Transcript | >Pro_DTO070G2_2|g5820.t1 ATGAGGACGCCGCTTTCACACTTTCTCTCGGCCCTGCTGCTATTGCAGACATGCGCAGCTGGGCCTGGTCAGCCG CTTACTGACCAAACAGCGTCCGCGGCAACGGGCCGCGATGCAGACCACGAATTTACGTTCCTGGCAGGGGAAGCA GAACCCCGACCTATGACTCAACGAGTCGAGAATGCCTGGAATACCCTTCGCACAATAAAGAATCCAGTCCTTCAA TCCGACAAGTCGAGAGGATTACTAGGGACGGTCACATACTATGGCCGTCAAACGGTCCGACTGCTATTCTTGAAC CGCCCTTCGACTGAAAAACCCGAGCAGAAAATAAACAAACATCTGACGGGAGCAGTGGAGGAGCTGAGAATAGCT GCAGACGAAGACCGAGACCCGGATGCTATGTTCTTGTTAGCAGAGATGAACTTCTATGGCAACTTCTCCCATCCC CGCGATTTCAAAGAGGCCTTCCGCTGGTACCACGAACTAGCATGGTTGGACGGAAACAACACAGCGCAGAACATG GTCGGGTTCATGTATGCGACGGGCATCGGCGGTGCGGTCGAACCCGACCAGGCAAAGGCCCTGATGTACCACGAA TTTGCAGCGGAAACAGGGAACATTCGCTCGGAGATGACACTTGCGTATCGCTACCACACTGGTATCGGAACGCCG AAGGATTGTGACCATGCGATCCATTACTACAAGAAGGTTGCGGACAAGGCGGTCGAGTACTACCGCTCAGGCCCT CCGGGTGGTAGGTCTATGGTTCGAGAATCTTATCGTTGGGCAGACGAAGAAGGTGGTGTCTACGGTCCAGGAGCC AGTGTGTCGAGCTCGGGTCAAAATGCGCGGGACGCTGCCAATGCCTCTCCTGAGGCCAGCGTGGAAGATATACTA GAATACTTGGATCTCATGTCCCGGAAGGGTGAACTGAAGGCTACATACACCCTCGGTAAGATGAACTTCGAGGGC GCCCGGGGCTTGCCGCGGAATTTCCGACTGGCTATGAAGCATTTCAAGGTTGTTACCAAGAAATATTGGAACAAG GATGGGTCCGTCAACTCAAACCCCCCTGCAGGGCTTGATAAACTGGCATCCAAGGCCGCAGGACATATTGGCCTG ATGTACCTTCGCGGAGAGGGTGTTAAGCAACACTTCCCGACTGCCCTCACATGGTTCCGGAGGGGTATTACGAAC GGGGACCCGATGTGCCAGCATTGGATGGGTCTGATGTATCTCAAGGGCTATGGTATTCCGCAGGATGCCTTCAAG GCATCTCACTACTTCAAAGCAGCGGCAGAGCAGGATTCCCCTGCGTCAGAATCACGATTAGGCGCTCTGTTCTTG GACCAAGGAGATGTGGCAACCGCAACACGTTACTTCGAGCTTGCCGCCCGCTGGGGCTGGATGGAGGCGTACTAT TATCTAGCTGAGATGGCCAACTTCGGTATTGGCAGACAGCGTCACTGTGGTGTGGCCGCTGCCTACTATAAAATG GTTGCCGAAAAAGCAGAGATCGTCCACTCAGCTTTCGTGGAGGCAAACGCTGCTTACGAAACCGGTGATAAGGAG GGCGCTCTCATTCCGTCAATGATGGCAGCCGAGCAAGGCTATGAGAACGCACAGGCAAATGTGGCTTATCTGCTT GATGAGCATCGCTCCGTACTCTCACTAAATTCCATCCTTCCATGGGCTGAGAAGGCTCGATCCTCCTTGATGCGC AATGCGCGACTGGCCTTGATTTATTGGACCCGCTCTTCGAAGCAAGCCAACATCGACTCTTTGGTCAAGATGGGT GACTACTACCTGTCTGGTACTGGTACACCTATCGATGCCGACAAGGCCTCGACCTGTTACCACAATGCTGCTGAA GCCCACCACAGTGCCCAGGGCTACTGGAATTTGGGATGGATGCATGAGAATGGCGTGGCAGTAGATCAGGATTTC CACATGGCCAAGCGATATTATGATTTGGCTCTTGACCTCAGCCCCGAAGCGTATCTGCCAGTGAAGCTCAGCTTG ATCAAACTCCGGGCTCGAGGATACTGGAATCGCATCACTAACGGAGACATTAACCCCATCCATGAGGAGGAAGAC TCGAAGCCCCGTCGTACCTTCAAGGAATGGGTCAAGGCTTTCATCGAGAACGACGAGGATGGCTATTACGAAGAC CTTTATGAACTACAACGGGGTGATGATGATGAATATCGTGGCTTGGAATCCGAAGGCCACGAAGATGGCTACTAT GATGACCTGGACCTTGATATCGACGAGGGAATGCTCGAGGGTCTCCTCATTGTCGGACTGGCTGCTGCGCTGTTG GTTTTGGTATACTACCGTCAGCAGCAGCAGCGCAACCGACAGAACCAGAACGCCAATGCCAACGCTAACGCCAAT GCCCCGAATGGAGATGGGAATGCCAACGACCGTGGATTATTCCCTCAGCCTGGTGAACCTGACTTTGGGCAATGG GTAGCAGGAGGAGTTGGTCATTGA |
Gene | >Pro_DTO070G2_2|g5820.t1 ATGAGGACGCCGCTTTCACACTTTCTCTCGGCCCTGCGTAAGATTTGCCCGCACCTGCAGGCCCGCATCGGAAAC TGACACCCCTTTTCAGTGCTATTGCAGACATGCGCAGCTGGGCCTGGTCAGCCGCTTACTGACCAAACAGCGTCC GCGGCAACGGGCCGCGATGCAGACCACGAATTTACGTTCCTGGCAGGGGAAGCAGAACCCCGACCTATGACTCGT GAGTAGAGACGACTTGTGCCTTATCGCCTGACGCTTGATACTGATTGCCTTCATCGTGATGATAGAACGAGTCGA GAATGCCTGGAATACCCTTCGCACAATAAAGAATCCAGTCCTTCAATCCGACAAGTCGAGAGGATTACTAGGGAC GGTCACATACTATGGCCGTCAAACGGTCCGACTGCTATTCTTGAACCGCCCTTCGACTGAAAAACCCGAGCAGAA AATAAACAAACATCTGACGGGAGCAGTGGAGGAGCTGAGAATAGCTGCAGACGAAGACCGAGACCCGGATGCTAT GTTCTTGTTAGCAGAGATGAACTTCTATGGCAACTTCTCCCATCCCCGCGATTTCAAAGAGGCCTTCCGCTGGTA CCACGAACTAGCATGGTTGGACGGAAACAACACAGCGCAGAACATGGTCGGGTTCATGTATGCGACGGGCATCGG CGGTGCGGTCGAACCCGACCAGGCAAAGGCCCTGATGTACCACGAATTTGCAGCGGAAACAGGGAACATTCGCTC GGAGATGACACTTGCGTATCGCTACCACACTGGTATCGGAACGCCGAAGGATTGTGACCATGCGATCCATTACTA CAAGAAGGTTGCGGACAAGGCGGTCGAGTACTACCGCTCAGGCCCTCCGGGTGGTAGGTCTATGGTTCGAGAATC TTATCGTTGGGCAGACGAAGAAGGTGGTGTCTACGGTCCAGGAGCCAGTGTGTCGAGCTCGGGTCAAAATGCGCG GGACGCTGCCAATGCCTCTCCTGAGGCCAGCGTGGAAGATATACTAGAATACTTGGATCTCATGTCCCGGAAGGG TGAACTGAAGGCTACATACACCCTCGGTAAGATGAACTTCGAGGGCGCCCGGGGCTTGCCGCGGAATTTCCGACT GGCTATGAAGCATTTCAAGGTTGTTACCAAGAAATATTGGAACAAGGATGGGTCCGTCAACTCAAACCCCCCTGC AGGGCTTGATAAACTGGCATCCAAGGCCGCAGGACATATTGGCCTGATGTACCTTCGCGGAGAGGGTGTTAAGCA ACACTTCCCGACTGCCCTCACATGGTTCCGGAGGGGTATTACGAACGGGGACCCGATGTGCCAGCATTGGATGGG TCTGATGTATCTCAAGGGCTATGGTATTCCGCAGGATGCCTTCAAGGCATCTCACTACTTCAAAGCAGCGGCAGA GCAGGATTCCCCTGCGTCAGAATCACGATTAGGCGCTCTGTTCTTGGACCAAGGAGATGTGGCAACCGCAACACG TTACTTCGAGCTTGCCGCCCGCTGGGGCTGGATGGAGGCGTACTATTATCTAGCTGAGATGGCCAACTTCGGTAT TGGCAGACAGCGTCACTGTGGTGTGGCCGCTGCCTACTATAAAATGGTTGCCGAAAAAGCAGAGATCGTCCACTC AGCTTTCGTGGAGGCAAACGCTGCTTACGAAACCGGTGATAAGGAGGGCGCTCTCATTCCGTCAATGATGGCAGC CGAGCAAGGCTATGAGAACGCACAGGCAAATGTGGCTTATCTGCTTGATGAGCATCGCTCCGTACTCTCACTAAA TTCCATCCTTCCATGGGCTGAGAAGGCTCGATCCTCCTTGATGCGCAATGCGCGACTGGCCTTGATTTATTGGAC CCGCTCTTCGAAGCAAGCCAACATCGACTCTTTGGTCAAGATGGGTGACTACTACCTGTCTGGTACTGGTACACC TATCGATGCCGACAAGGCCTCGACCTGTTACCACAATGCTGCTGAAGCCCACCACAGTGCCCAGGGCTACTGGAA TTTGGGATGGATGCATGAGAATGGCGTGGCAGTAGATCAGGATTTCCACATGGCCAAGCGATATTATGATTTGGC TCTTGACCTCAGCCCCGAAGCGTATCTGCCAGTGAAGCTCAGCTTGATCAAACTCCGGGCTCGAGGATACTGGAA TCGCATCACTAACGGAGACATTAACCCCATCCATGAGGAGGAAGGTAAGCTGCTCCTTCGCTCTTACCCCGTGAA ATTAATCGCGTTCTAGTTTCTTACTTACGTTTATCACTAGACTCGAAGCCCCGTCGTACCTTCAAGGAATGGGTC AAGGCTTTCATCGAGAACGACGAGGATGGCTATTACGAAGACCTTTATGAACTACAACGGGGTGATGATGATGAA TATCGTGGCTTGGAATCCGAAGGCCACGAAGATGGCTACTATGATGACCTGGACCTTGATATCGACGAGGGAATG CTCGAGGGTCTCCTCATTGTCGGACTGGCTGCTGCGCTGTTGGTTTTGGTATACTACCGTCAGCAGCAGCAGCGC AACCGACAGAACCAGAACGCCAATGCCAACGCTAACGCCAATGCCCCGAATGGAGATGGGAATGCCAACGACCGT GGATTATTCCCTCAGCCTGGTGAACCTGACTTTGGGCAATGGGTAGCAGGAGGAGTTGGTCATTGA |