Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO070G2_2|g5773.t1
Gene name
Locationscaffold_07:938104..939127
Strand+
Gene length (bp)1023
Transcript length (bp)1023
Coding sequence length (bp)1023
Protein length (aa) 341

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF03067 LPMO_10 Lytic polysaccharide mono-oxygenase, cellulose-degrading 2.6E-11 20 189

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 20 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO070G2_2|g5773.t1
MKSFTPALAFASIISLVNAHGFVTSPAAREPGTAMGAACGQQVLSNQESDKYGNIQGELQVAATQTDYNAAECDI
WLCKGYKFADNQANIQSYTAGEEVAFTVDIRAPHTGVANVSVVQTSSNTVIGSPLISWDVYASVATGVTANETSF
SVTIPDDLGSQCATAGDCVLQWYWYAESIDQTYESCIDFTLGGSGSSAVASTSSTSSTSSISSTSSSTVVAATTT
PTAAVVETPTTAAVQPTTSSTTVAAVVKTPTTAAVQSTTPSITVAAQPTTSTTTVAAQPTTFATTVRQSTTSAAA
QVPTTSADASATTSAVSIPTGSAADVLSWIESLLGNLVGN*
Coding >Pro_DTO070G2_2|g5773.t1
ATGAAGTCTTTCACCCCCGCCCTGGCTTTCGCCAGTATCATCTCCTTGGTCAACGCCCATGGCTTCGTCACCAGC
CCGGCAGCCCGCGAGCCCGGTACTGCAATGGGAGCCGCGTGTGGTCAGCAAGTTCTGTCCAACCAGGAGTCCGAC
AAGTACGGCAACATCCAAGGCGAGCTACAAGTTGCCGCCACCCAGACCGACTACAACGCCGCCGAGTGTGACATC
TGGCTGTGCAAGGGCTACAAGTTCGCCGACAACCAGGCCAACATCCAGTCGTACACGGCAGGAGAGGAAGTCGCC
TTCACTGTTGATATTCGCGCCCCGCACACCGGTGTGGCCAATGTCTCTGTCGTCCAGACTTCTTCCAACACTGTC
ATTGGCAGTCCCCTAATCTCCTGGGATGTCTATGCGTCCGTAGCCACCGGCGTCACTGCCAACGAGACCAGCTTC
AGCGTCACTATCCCCGACGATCTTGGAAGCCAGTGTGCCACCGCCGGTGACTGTGTGTTGCAGTGGTACTGGTAC
GCAGAATCAATCGACCAGACCTACGAGTCGTGTATCGACTTCACTCTCGGTGGATCTGGTAGCTCGGCGGTTGCG
TCCACCTCGTCCACCTCATCAACCTCGTCGATCTCGTCGACCTCCAGCTCTACGGTGGTTGCCGCCACTACCACC
CCAACTGCTGCTGTTGTTGAAACCCCTACCACGGCCGCTGTTCAGCCTACAACGTCCTCCACCACAGTTGCCGCC
GTTGTTAAAACCCCTACCACGGCCGCTGTTCAGTCTACAACGCCCTCCATCACAGTTGCTGCTCAGCCTACTACT
TCCACCACCACGGTTGCGGCCCAGCCTACTACTTTCGCCACCACTGTCCGTCAATCGACTACTTCTGCTGCGGCG
CAAGTCCCTACTACCAGCGCTGATGCCTCCGCTACTACCTCGGCCGTATCTATCCCCACTGGTAGTGCTGCAGAT
GTCCTATCCTGGATTGAGTCCTTGTTGGGCAACTTGGTGGGTAATTAA
Transcript >Pro_DTO070G2_2|g5773.t1
ATGAAGTCTTTCACCCCCGCCCTGGCTTTCGCCAGTATCATCTCCTTGGTCAACGCCCATGGCTTCGTCACCAGC
CCGGCAGCCCGCGAGCCCGGTACTGCAATGGGAGCCGCGTGTGGTCAGCAAGTTCTGTCCAACCAGGAGTCCGAC
AAGTACGGCAACATCCAAGGCGAGCTACAAGTTGCCGCCACCCAGACCGACTACAACGCCGCCGAGTGTGACATC
TGGCTGTGCAAGGGCTACAAGTTCGCCGACAACCAGGCCAACATCCAGTCGTACACGGCAGGAGAGGAAGTCGCC
TTCACTGTTGATATTCGCGCCCCGCACACCGGTGTGGCCAATGTCTCTGTCGTCCAGACTTCTTCCAACACTGTC
ATTGGCAGTCCCCTAATCTCCTGGGATGTCTATGCGTCCGTAGCCACCGGCGTCACTGCCAACGAGACCAGCTTC
AGCGTCACTATCCCCGACGATCTTGGAAGCCAGTGTGCCACCGCCGGTGACTGTGTGTTGCAGTGGTACTGGTAC
GCAGAATCAATCGACCAGACCTACGAGTCGTGTATCGACTTCACTCTCGGTGGATCTGGTAGCTCGGCGGTTGCG
TCCACCTCGTCCACCTCATCAACCTCGTCGATCTCGTCGACCTCCAGCTCTACGGTGGTTGCCGCCACTACCACC
CCAACTGCTGCTGTTGTTGAAACCCCTACCACGGCCGCTGTTCAGCCTACAACGTCCTCCACCACAGTTGCCGCC
GTTGTTAAAACCCCTACCACGGCCGCTGTTCAGTCTACAACGCCCTCCATCACAGTTGCTGCTCAGCCTACTACT
TCCACCACCACGGTTGCGGCCCAGCCTACTACTTTCGCCACCACTGTCCGTCAATCGACTACTTCTGCTGCGGCG
CAAGTCCCTACTACCAGCGCTGATGCCTCCGCTACTACCTCGGCCGTATCTATCCCCACTGGTAGTGCTGCAGAT
GTCCTATCCTGGATTGAGTCCTTGTTGGGCAACTTGGTGGGTAATTAA
Gene >Pro_DTO070G2_2|g5773.t1
ATGAAGTCTTTCACCCCCGCCCTGGCTTTCGCCAGTATCATCTCCTTGGTCAACGCCCATGGCTTCGTCACCAGC
CCGGCAGCCCGCGAGCCCGGTACTGCAATGGGAGCCGCGTGTGGTCAGCAAGTTCTGTCCAACCAGGAGTCCGAC
AAGTACGGCAACATCCAAGGCGAGCTACAAGTTGCCGCCACCCAGACCGACTACAACGCCGCCGAGTGTGACATC
TGGCTGTGCAAGGGCTACAAGTTCGCCGACAACCAGGCCAACATCCAGTCGTACACGGCAGGAGAGGAAGTCGCC
TTCACTGTTGATATTCGCGCCCCGCACACCGGTGTGGCCAATGTCTCTGTCGTCCAGACTTCTTCCAACACTGTC
ATTGGCAGTCCCCTAATCTCCTGGGATGTCTATGCGTCCGTAGCCACCGGCGTCACTGCCAACGAGACCAGCTTC
AGCGTCACTATCCCCGACGATCTTGGAAGCCAGTGTGCCACCGCCGGTGACTGTGTGTTGCAGTGGTACTGGTAC
GCAGAATCAATCGACCAGACCTACGAGTCGTGTATCGACTTCACTCTCGGTGGATCTGGTAGCTCGGCGGTTGCG
TCCACCTCGTCCACCTCATCAACCTCGTCGATCTCGTCGACCTCCAGCTCTACGGTGGTTGCCGCCACTACCACC
CCAACTGCTGCTGTTGTTGAAACCCCTACCACGGCCGCTGTTCAGCCTACAACGTCCTCCACCACAGTTGCCGCC
GTTGTTAAAACCCCTACCACGGCCGCTGTTCAGTCTACAACGCCCTCCATCACAGTTGCTGCTCAGCCTACTACT
TCCACCACCACGGTTGCGGCCCAGCCTACTACTTTCGCCACCACTGTCCGTCAATCGACTACTTCTGCTGCGGCG
CAAGTCCCTACTACCAGCGCTGATGCCTCCGCTACTACCTCGGCCGTATCTATCCCCACTGGTAGTGCTGCAGAT
GTCCTATCCTGGATTGAGTCCTTGTTGGGCAACTTGGTGGGTAATTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail