© 2023 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | Pro_DTO070G2_2|g5757.t1 |
| Gene name | |
| Location | scaffold_07:902740..903792 |
| Strand | + |
| Gene length (bp) | 1052 |
| Transcript length (bp) | 990 |
| Coding sequence length (bp) | 990 |
| Protein length (aa) | 330 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00775 | Dioxygenase_C | Dioxygenase | 1.3E-38 | 111 | 292 |
| PF04444 | Dioxygenase_N | Catechol dioxygenase N terminus | 1.1E-31 | 32 | 105 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0005506 | iron ion binding | Yes |
| GO:0008199 | ferric iron binding | Yes |
| GO:0006725 | cellular aromatic compound metabolic process | Yes |
| GO:0003824 | catalytic activity | Yes |
| GO:0018576 | catechol 1,2-dioxygenase activity | Yes |
| GO:0009712 | catechol-containing compound metabolic process | Yes |
| GO:0019114 | catechol dioxygenase activity | No |
| GO:0016491 | oxidoreductase activity | No |
| GO:0043169 | cation binding | No |
| GO:0016701 | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen | No |
| GO:1901615 | organic hydroxy compound metabolic process | No |
| GO:0046872 | metal ion binding | No |
| GO:0009987 | cellular process | No |
| GO:0016702 | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen | No |
| GO:0008152 | metabolic process | No |
| GO:0008150 | biological_process | No |
| GO:0051213 | dioxygenase activity | No |
| GO:0003674 | molecular_function | No |
| GO:0043167 | ion binding | No |
| GO:0046914 | transition metal ion binding | No |
| GO:0005488 | binding | No |
| GO:0071704 | organic substance metabolic process | No |
| GO:0044237 | cellular metabolic process | No |
| GO:0018958 | phenol-containing compound metabolic process | No |
| GO:1901360 | organic cyclic compound metabolic process | No |
| Orthofinder run ID | 2 |
| Orthogroup | 1885 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Pro_DTO070G2_2|g5757.t1 MDPSKIKIPPMKDQTVDNITANVITINSLCPDPRLKYILERLVTHLHDFARETRLSSAEWMTGLNFLTEVGQACT DVRQEYILLSDVLGLSILVDSIDHPKPKGSTEGTVLGPFHTHDAEEMPAGASMSHDPHGEPLLVVCSLRDLQGAP VHDVKVDIWETDSTGHYDVQYAGRVGPDGRCVMRSDQDGVFWFMAITPVPYPIPHDGPVGRLLEMLRRHPYRPSH MHFMFEKEGFDHLVTALYLRNDPYETSDAVFGVKDSLTVEIGKADAEIARKYNVPEGHALLTYDFVLVSDEETKE LRAHNSKVALDKLGRKVKIVNGLPVPDLD* |
| Coding | >Pro_DTO070G2_2|g5757.t1 ATGGACCCCTCCAAAATCAAGATCCCCCCAATGAAAGACCAAACCGTGGACAACATCACCGCGAACGTAATCACC ATCAACAGCCTCTGCCCAGACCCACGCCTAAAATACATCCTCGAACGCCTAGTAACGCACCTCCACGACTTCGCG CGCGAAACCCGTCTCAGCAGCGCCGAATGGATGACCGGCCTCAACTTCCTAACAGAAGTCGGCCAAGCCTGTACA GACGTACGACAAGAATACATCCTGCTGTCCGACGTCCTAGGCCTCTCGATCCTCGTCGACTCAATCGACCACCCC AAGCCGAAGGGCTCCACAGAGGGAACCGTGCTGGGCCCGTTCCACACGCACGACGCCGAGGAAATGCCCGCCGGC GCGTCCATGTCGCATGATCCGCACGGCGAGCCGTTGCTGGTTGTTTGCTCGCTGCGGGATTTGCAGGGGGCGCCG GTGCACGACGTCAAGGTCGATATCTGGGAGACGGATTCGACGGGCCATTATGATGTCCAGTATGCTGGGAGGGTG GGGCCGGATGGGAGGTGTGTTATGCGCTCGGATCAAGACGGGGTGTTTTGGTTTATGGCGATTACGCCGGTGCCG TATCCGATTCCGCATGATGGGCCTGTTGGGAGGTTGCTGGAGATGTTGCGGCGGCATCCGTATCGGCCTTCGCAT ATGCACTTTATGTTTGAGAAGGAGGGGTTTGACCATTTGGTTACCGCTCTCTATCTCCGAAATGACCCTTATGAA ACATCTGATGCGGTCTTCGGCGTTAAGGATTCCTTGACTGTAGAAATTGGTAAGGCGGACGCGGAGATCGCTAGG AAATATAATGTCCCCGAGGGCCATGCTCTCCTTACATATGACTTTGTGCTTGTCTCCGACGAAGAGACGAAAGAG TTGCGTGCGCATAACTCCAAGGTCGCGCTGGACAAGCTAGGACGGAAAGTCAAGATTGTCAATGGGCTGCCTGTG CCGGATCTGGATTAA |
| Transcript | >Pro_DTO070G2_2|g5757.t1 ATGGACCCCTCCAAAATCAAGATCCCCCCAATGAAAGACCAAACCGTGGACAACATCACCGCGAACGTAATCACC ATCAACAGCCTCTGCCCAGACCCACGCCTAAAATACATCCTCGAACGCCTAGTAACGCACCTCCACGACTTCGCG CGCGAAACCCGTCTCAGCAGCGCCGAATGGATGACCGGCCTCAACTTCCTAACAGAAGTCGGCCAAGCCTGTACA GACGTACGACAAGAATACATCCTGCTGTCCGACGTCCTAGGCCTCTCGATCCTCGTCGACTCAATCGACCACCCC AAGCCGAAGGGCTCCACAGAGGGAACCGTGCTGGGCCCGTTCCACACGCACGACGCCGAGGAAATGCCCGCCGGC GCGTCCATGTCGCATGATCCGCACGGCGAGCCGTTGCTGGTTGTTTGCTCGCTGCGGGATTTGCAGGGGGCGCCG GTGCACGACGTCAAGGTCGATATCTGGGAGACGGATTCGACGGGCCATTATGATGTCCAGTATGCTGGGAGGGTG GGGCCGGATGGGAGGTGTGTTATGCGCTCGGATCAAGACGGGGTGTTTTGGTTTATGGCGATTACGCCGGTGCCG TATCCGATTCCGCATGATGGGCCTGTTGGGAGGTTGCTGGAGATGTTGCGGCGGCATCCGTATCGGCCTTCGCAT ATGCACTTTATGTTTGAGAAGGAGGGGTTTGACCATTTGGTTACCGCTCTCTATCTCCGAAATGACCCTTATGAA ACATCTGATGCGGTCTTCGGCGTTAAGGATTCCTTGACTGTAGAAATTGGTAAGGCGGACGCGGAGATCGCTAGG AAATATAATGTCCCCGAGGGCCATGCTCTCCTTACATATGACTTTGTGCTTGTCTCCGACGAAGAGACGAAAGAG TTGCGTGCGCATAACTCCAAGGTCGCGCTGGACAAGCTAGGACGGAAAGTCAAGATTGTCAATGGGCTGCCTGTG CCGGATCTGGATTAA |
| Gene | >Pro_DTO070G2_2|g5757.t1 ATGGACCCCTCCAAAATCAAGATCCCCCCAATGAAAGACCAAACCGTGGACAACATCACCGCGAACGTAATCACC ATCAACAGCCTCTGCCCAGACCCACGCCTAAAATACATCCTCGAACGCCTAGTAACGCACCTCCACGACTTCGCG CGCGAAACCCGTCTCAGCAGCGCCGAATGGATGACCGGCCTCAACTTCCTAACAGAAGTCGGCCAAGCCTGTACA GACGTACGACAAGAATACATCCTGCTGTCCGACGTCCTAGGCCTCTCGATCCTCGTCGACTCAATCGACCACCCC AAGCCGAAGGGCTCCACAGAGGGAACCGTGCTGGGCCCGTTCCACACGCACGACGCCGAGGAAATGCCCGCCGGC GCGTCCATGTCGCATGATCCGCACGGCGAGCCGTTGCTGGTTGTTTGCTCGCTGCGGGATTTGCAGGGGGCGCCG GTGCACGACGTCAAGGTCGATATCTGGGAGACGGATTCGACGGGCCATTATGATGTCCAGTATGCTGGGAGGGTG GGGCCGGATGGGAGGTGTGTTATGCGCTCGGATCAAGACGGGGTGTTTTGGTTTATGGCGATTACGCCGGTGCCG TATCCGATTCCGCATGATGGGCCTGTTGGGAGGTTGCTGGAGATGTTGCGGCGGCATCCGTATCGGCCTTCGCAT ATGCACTTTATGTTTGAGAAGGAGGGGTTTGACCATTTGGTTACGTATGTTGGGCTGTTGCCCTTTTTGACTTGT GTGGGCTATGGTATGCTAATCTGCGTTCTAGCGCTCTCTATCTCCGAAATGACCCTTATGAAACATCTGATGCGG TCTTCGGCGTTAAGGATTCCTTGACTGTAGAAATTGGTAAGGCGGACGCGGAGATCGCTAGGAAATATAATGTCC CCGAGGGCCATGCTCTCCTTACATATGACTTTGTGCTTGTCTCCGACGAAGAGACGAAAGAGTTGCGTGCGCATA ACTCCAAGGTCGCGCTGGACAAGCTAGGACGGAAAGTCAAGATTGTCAATGGGCTGCCTGTGCCGGATCTGGATT AA |