Protein ID | Pro_DTO070G2_2|g5678.t1 |
Gene name | |
Location | scaffold_07:684171..685797 |
Strand | - |
Gene length (bp) | 1626 |
Transcript length (bp) | 1224 |
Coding sequence length (bp) | 1224 |
Protein length (aa) | 408 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF08450 | SGL | SMP-30/Gluconolactonase/LRE-like region | 3.7E-22 | 177 | 381 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
Yes | 1 - 24 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Pro_DTO070G2_2|g5678.t1 MASQFSSLATLLLLGSFLVPVSASKIPAQAQLIDQKAFNVLDTTQPPTEFNAKSLFVPPGSTGDSLAQRPFHIYD KEFLKIIGEAPTLTRIAHSPKDPLFHEAVVWSKETDEVFFVQNAGAKNASTGLKKSAIIERISLADAAAVSQKSD AVGLVDVTTIPSSPTILNPNGATNYRGQIIFAGEGQGDYEPPALWVMNPRSPFNATVILNNYFGRQFNSLNDVAI HPKNKDIYFTDTIYGYVQDFRPAPGLQDQVYRFNPETGAVTVVADGFDHPNGFTFSPDGKYAYVTDTGIDSGFFG LNFTRPASIYRFDVKDDGTLGNRKTFAFVHSGAPDGIHCDSWGNVYAGCGDGVHVWNPSGKLIGKIYLGSGTANF NFAGKGRMVICAETDLYYATLAAAGNYVDSEM* |
Coding | >Pro_DTO070G2_2|g5678.t1 ATGGCTTCCCAGTTTTCCTCGCTAGCTACACTGCTACTCCTAGGATCCTTCCTAGTGCCAGTCAGCGCGAGCAAG ATTCCTGCTCAAGCGCAGTTGATTGACCAAAAAGCCTTCAATGTCCTGGACACGACCCAGCCCCCAACCGAATTC AATGCGAAGAGTCTATTTGTGCCTCCAGGGTCGACAGGAGACAGTCTAGCCCAGCGGCCTTTCCATATATACGAC AAGGAATTTCTGAAGATCATCGGAGAAGCTCCAACTCTAACCCGGATCGCACATTCCCCAAAGGACCCTCTATTC CATGAAGCAGTTGTATGGTCCAAGGAAACGGACGAGGTGTTTTTTGTCCAAAATGCAGGTGCTAAGAACGCCAGC ACCGGTCTTAAAAAGTCGGCTATCATTGAGAGGATTTCGCTTGCGGACGCTGCTGCTGTCTCCCAGAAGTCGGAT GCCGTAGGCCTTGTGGATGTAACCACCATTCCGTCATCGCCAACGATTCTCAATCCAAATGGGGCTACCAATTAC CGGGGACAGATCATATTCGCCGGCGAGGGTCAAGGTGACTATGAGCCCCCTGCTTTGTGGGTTATGAACCCGAGA AGTCCATTCAACGCTACAGTTATCCTTAACAACTACTTCGGCCGCCAATTTAACTCTCTGAATGATGTCGCCATC CACCCGAAAAACAAAGATATCTACTTCACAGACACAATCTATGGCTATGTGCAGGACTTCCGCCCTGCGCCCGGT CTGCAGGATCAAGTGTACCGGTTCAATCCCGAGACAGGTGCTGTGACCGTTGTCGCGGATGGATTTGACCATCCC AACGGCTTTACTTTCTCTCCGGATGGCAAGTACGCATACGTCACCGATACTGGAATTGATAGCGGCTTTTTCGGT CTCAATTTCACCCGCCCTGCTTCTATCTACCGATTCGATGTGAAAGACGACGGCACACTCGGCAATCGCAAGACT TTTGCCTTTGTCCACTCTGGTGCACCCGATGGCATCCATTGCGATTCATGGGGTAACGTGTATGCTGGCTGTGGT GACGGCGTCCATGTCTGGAATCCATCTGGCAAGCTCATCGGCAAGATCTATCTCGGATCTGGTACGGCGAATTTC AACTTCGCTGGAAAAGGGAGAATGGTTATCTGCGCCGAGACAGACCTTTACTATGCCACGTTAGCCGCGGCTGGG AATTATGTCGACAGTGAGATGTGA |
Transcript | >Pro_DTO070G2_2|g5678.t1 ATGGCTTCCCAGTTTTCCTCGCTAGCTACACTGCTACTCCTAGGATCCTTCCTAGTGCCAGTCAGCGCGAGCAAG ATTCCTGCTCAAGCGCAGTTGATTGACCAAAAAGCCTTCAATGTCCTGGACACGACCCAGCCCCCAACCGAATTC AATGCGAAGAGTCTATTTGTGCCTCCAGGGTCGACAGGAGACAGTCTAGCCCAGCGGCCTTTCCATATATACGAC AAGGAATTTCTGAAGATCATCGGAGAAGCTCCAACTCTAACCCGGATCGCACATTCCCCAAAGGACCCTCTATTC CATGAAGCAGTTGTATGGTCCAAGGAAACGGACGAGGTGTTTTTTGTCCAAAATGCAGGTGCTAAGAACGCCAGC ACCGGTCTTAAAAAGTCGGCTATCATTGAGAGGATTTCGCTTGCGGACGCTGCTGCTGTCTCCCAGAAGTCGGAT GCCGTAGGCCTTGTGGATGTAACCACCATTCCGTCATCGCCAACGATTCTCAATCCAAATGGGGCTACCAATTAC CGGGGACAGATCATATTCGCCGGCGAGGGTCAAGGTGACTATGAGCCCCCTGCTTTGTGGGTTATGAACCCGAGA AGTCCATTCAACGCTACAGTTATCCTTAACAACTACTTCGGCCGCCAATTTAACTCTCTGAATGATGTCGCCATC CACCCGAAAAACAAAGATATCTACTTCACAGACACAATCTATGGCTATGTGCAGGACTTCCGCCCTGCGCCCGGT CTGCAGGATCAAGTGTACCGGTTCAATCCCGAGACAGGTGCTGTGACCGTTGTCGCGGATGGATTTGACCATCCC AACGGCTTTACTTTCTCTCCGGATGGCAAGTACGCATACGTCACCGATACTGGAATTGATAGCGGCTTTTTCGGT CTCAATTTCACCCGCCCTGCTTCTATCTACCGATTCGATGTGAAAGACGACGGCACACTCGGCAATCGCAAGACT TTTGCCTTTGTCCACTCTGGTGCACCCGATGGCATCCATTGCGATTCATGGGGTAACGTGTATGCTGGCTGTGGT GACGGCGTCCATGTCTGGAATCCATCTGGCAAGCTCATCGGCAAGATCTATCTCGGATCTGGTACGGCGAATTTC AACTTCGCTGGAAAAGGGAGAATGGTTATCTGCGCCGAGACAGACCTTTACTATGCCACGTTAGCCGCGGCTGGG AATTATGTCGACAGTGAGATGTGA |
Gene | >Pro_DTO070G2_2|g5678.t1 ATGGCTTCCCAGTTTTCCTCGCTAGCTACACTGCTACTCCTAGGATCCTTCCTAGTGCCAGTCAGCGCGAGCAAG ATTCCTGCTCAAGCGCAGTTGATTGACCAAAAAGCCTTCAATGTCCTGGACACGACCCAGCCCCCAACCGAATTC AATGCGAAGAGTGTACGCGATTCCTCAATCGCGGTTTCCAGTAGCCCCTTTTACTGACCGATGCGTAGCTATTTG TGCCTCCAGGGTCGACAGGAGACAGTCTAGCCCAGCGGCCTTTCCATATATACGACAAGGAATTTCTGAAGATCA TCGGAGAAGCTCCAACTCTAACCCGGATCGCACATTCCCCAAAGGACCCTCTATTCCATGAAGCAGTTGTATGGT AGGTATCCAACACGGAAATAATTCCAGGCCAAGGGAAAATAGCATCTGACTTTACTTTCTAGGTCCAAGGAAACG GACGAGGTGTTTTTTGTCCAAAATGCAGGTGCTAAGAACGCCAGCACCGGTCTTAAAAAGTCGGCTATCATTGAG AGGATTTCGCTTGCGGACGCTGCTGCTGTCTCCCAGAAGTCGGATGCCGTAGGCCTTGTGGATGTAACCACCATT CCGTCATCGCCAACGATTCTCAATCCAAATGGTAGATGACCAGCTCTTTTTTGGTAGTTAAAGATAACTAACGGT GCTCAGGGGCTACCAATTACCGGGGACAGATCATATTCGCCGGCGAGGGTCAAGGTGACTATGAGCCCCCTGCTT TGTGGGTTATGAACCCGAGAAGTCCATTCAACGCTACAGGTTAGTACAAACCACCTCTTTGTATTTCTGGATTAA CAAAGCGGTCTGTAGTTATCCTTAACAACTACTTCGGCCGCCAATTTAACTCTCTGAATGATGTCGCCATCCACC CGAAAAACAAAGATATCTACTTCACAGACACAATCTATGGCTATGTGCAGGACTTCCGCCCTGCGCCCGGTCTGC AGGATCAAGTGTACCGGTTCAATCCCGAGACAGGTGCTGTGACCGTTGTCGCGGATGGATTTGACCATCCCAACG GTAGGAGATCAAGAATTTGTACAAGCTCAAAAAGGAAAGCGCAACTAACAATGTAACAGGCTTTACTTTCTCTCC GGATGGCAAGTACGCATACGTCACCGATACTGGAATTGATAGCGGCTTTTTCGGTCTCAATTTCACCCGCCCTGC TTCTATGTATGTGCTAGTTTTCGCGATCCACTGATTGGATTTGAAGCTGATTATAGACTGTGTGTTACAGCTACC GATTCGATGTGAAAGACGACGGCACACTCGGCAATCGCAAGACTTTTGCCTTTGTCCACTCTGGTGCACCCGATG GTAAGTTGGGCAGTCAAGCAAGCTGAATTTATGATGTTGAGGCTAATTCTTGAAAAAGGCATCCATTGCGATTCA TGGGGTAACGTGTATGCTGGCTGTGGTGACGGCGTCCATGTCTGGAATCCATCTGGCAAGCTCATCGGCAAGATC TATCTCGGATCTGGTACGGCGAATTTCAACTTCGCTGGAAAAGGGAGAATGGTTATCTGCGCCGAGACAGACCTT TACTATGCCACGTTAGCCGCGGCTGGGAATTATGTCGACAGTGAGATGTGA |