Fungal Genomics

General Properties

Protein ID	Pro_DTO070G2_2|g5647.t1
Gene name
Location	scaffold_07:614601..616750
Strand	-
Gene length (bp)	2149
Transcript length (bp)	1590
Coding sequence length (bp)	1590
Protein length (aa)	530

Overview

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF09284	RhgB_N	Rhamnogalacturonan lyase B, N-terminal	2.9E-109	23	271
PF14683	CBM-like	Polysaccharide lyase family 4, domain III	4.2E-42	362	527
PF14686	fn3_3	Polysaccharide lyase family 4, domain II	2.2E-22	277	350

GO

GO Term	Description	Terminal node
GO:0016837	carbon-oxygen lyase activity, acting on polysaccharides	Yes
GO:0005975	carbohydrate metabolic process	Yes
GO:0030246	carbohydrate binding	Yes
GO:0016829	lyase activity	No
GO:0071704	organic substance metabolic process	No
GO:0005488	binding	No
GO:0008152	metabolic process	No
GO:0016835	carbon-oxygen lyase activity	No
GO:0044238	primary metabolic process	No
GO:0003824	catalytic activity	No
GO:0003674	molecular_function	No
GO:0008150	biological_process	No

Deeploc

Deeploc data not available for this genome

SignalP

SignalP signal predicted	Location	Score
Yes	1 - 21	0.999798

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

CAZyme category	E-value	Start	End
PL4_1	4.3E-214	20	518

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID	2
Orthogroup	1996
Change Orthofinder run	2: Penicillium roqueforti - all strains

Species	Protein ID
Penicillium roqueforti DTO002I6	Pro_DTO002I6_2|g2440.t1
Penicillium roqueforti DTO003C3	Pro_DTO003C3_2|g163.t1
Penicillium roqueforti DTO003H1 (CBS 147308)	Pro_DTO003H1_2|g942.t1
Penicillium roqueforti DTO006G1	Pro_DTO006G1_2|g5647.t1
Penicillium roqueforti DTO006G7	Pro_DTO006G7_3|g1946.t1
Penicillium roqueforti DTO012A1	Pro_DTO012A1_2|g2925.t1
Penicillium roqueforti DTO012A2 (CBS 147309)	Pro_DTO012A2_2|g6292.t1
Penicillium roqueforti DTO012A6 (CBS 147310)	Pro_DTO012A6_2|g1650.t1
Penicillium roqueforti DTO012A7	Pro_DTO012A7_2|g3405.t1
Penicillium roqueforti DTO012A8	Pro_DTO012A8_2|g857.t1
Penicillium roqueforti DTO012A9	Pro_DTO012A9_2|g2828.t1
Penicillium roqueforti DTO013E5	Pro_DTO013E5_2|g3206.t1
Penicillium roqueforti DTO013F2	Pro_DTO013F2_2|g864.t1
Penicillium roqueforti DTO013F5 (CBS 147311)	Pro_DTO013F5_2|g7679.t1
Penicillium roqueforti DTO027I6	Pro_DTO027I6_2|g5632.t1
Penicillium roqueforti DTO032C6	Pro_DTO032C6_2|g3025.t1
Penicillium roqueforti DTO039G3	Pro_DTO039G3_2|g2483.t1
Penicillium roqueforti DTO046C5	Pro_DTO046C5_2|g5179.t1
Penicillium roqueforti DTO070G2 (CBS 147317)	Pro_DTO070G2_2|g5647.t1 (this protein)
Penicillium roqueforti DTO081F9 (CBS 147318)	Pro_DTO081F9_2|g5768.t1
Penicillium roqueforti DTO101D6 (CBS 147325)	Pro_DTO101D6_2|g5287.t1
Penicillium roqueforti DTO102I9 (CBS 147326)	Pro_DTO102I9_2|g3883.t1
Penicillium roqueforti DTO126G2 (CBS 147330)	Pro_DTO126G2_2|g4972.t1
Penicillium roqueforti DTO127F7 (CBS 147331)	Pro_DTO127F7_2|g3197.t1
Penicillium roqueforti DTO127F9 (CBS 147332)	Pro_DTO127F9_2|g7093.t1
Penicillium roqueforti DTO130C1 (CBS 147333)	Pro_DTO130C1_2|g773.t1
Penicillium roqueforti DTO163C3 (CBS 147337)	Pro_DTO163C3_2|g2220.t1
Penicillium roqueforti DTO163F5 (CBS 147338)	Pro_DTO163F5_2|g9256.t1
Penicillium roqueforti DTO163G4 (CBS 147339)	Pro_DTO163G4_2|g3670.t1
Penicillium roqueforti DTO265D5 (CBS 147372)	Pro_DTO265D5_2|g2859.t1
Penicillium roqueforti DTO369A1 (CBS 147354)	Pro_DTO369A1_2|g1726.t1
Penicillium roqueforti DTO375B1 (CBS 147355)	Pro_DTO375B1_2|g5027.t1
Penicillium roqueforti DTO377G2 (LCP 96.3914a)	Pro_DTO377G2_2|g4223.t1
Penicillium roqueforti LCP96 04111	Pro_DTO377G3_2|g6028.t1

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus Download genbank file of locus (reverse complement) The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Pro_DTO070G2_2|g5647.t1 MMFFKSLAIASLALWAKQASAAFGITTSTASYVIDAGSTNPLKFTVSRTNCDITSINYYGSELQYQSTGSHIGSG LGSATVSATQSGDYIKVTCETSTLTHYYVVHNGDSTIHMATYTTAEPTIGELRYIARLNSALLPNEEPFGVVSNI AGGTVVEGEDVFLVSGQTRSKFYSSERFIDDHIHCVSGSAHRVCMILNQYETSAGGPFHRDINTNNVGSYTGLYW YMNSGHVQTETYRQGLHGPYSMVFSRSGTPSSTLDTSFFADLSIKGYVATSARGYVTGTATGADSTFKWVVHWYN SAAQYWTYTSSSGAFTSPAMKPGTYTMVYYQGEYVVATSSVTVTAGSTTSKSISGSVKTGTTVFRIGDWDGTPNG FLNAANQLRMHPSDTRMSSWSPTTYTVGSSQVSSFPMALFKSVNSPLTIKFTASSSQTGAATLRIGTTLSFASGR PQVVFNSYSGATPAAPTNLNSRGVTRGAYRGFGEVYDVSIPAGTIVAGTNTITISVASGSSGDTYLSPNFIFDCV ELFQ*
Coding	>Pro_DTO070G2_2|g5647.t1 ATGATGTTTTTCAAGTCCTTGGCCATTGCTTCGCTAGCACTTTGGGCTAAGCAGGCATCCGCGGCCTTCGGAATC ACTACTAGCACTGCTTCCTATGTGATTGATGCTGGCTCTACAAACCCGCTTAAATTTACCGTCAGCCGGACAAAC TGTGACATTACTTCGATCAATTACTATGGATCCGAGCTTCAATACCAGTCGACTGGATCTCATATCGGATCGGGT CTTGGTAGCGCAACTGTGTCTGCCACGCAGAGTGGCGACTACATCAAGGTGACCTGCGAAACATCCACCTTGACA CACTACTATGTTGTCCACAACGGAGATTCGACCATCCACATGGCGACATACACAACCGCAGAACCTACTATTGGA GAACTTCGATATATCGCGCGCCTGAATTCAGCCCTGCTGCCGAATGAAGAGCCATTCGGTGTTGTCTCTAATATT GCAGGTGGCACTGTCGTCGAGGGAGAGGATGTGTTCTTGGTTAGTGGACAAACGCGAAGCAAGTTCTACTCGAGC GAACGGTTTATTGATGACCACATCCACTGTGTCTCTGGAAGCGCGCACCGTGTCTGCATGATCTTAAATCAATAT GAGACATCTGCTGGCGGACCTTTCCATCGTGATATCAACACCAACAATGTTGGTTCTTATACTGGCCTATACTGG TACATGAACTCCGGACACGTTCAGACCGAGACCTACCGCCAGGGCCTGCACGGCCCATACTCGATGGTCTTCAGC CGAAGCGGTACCCCCAGTTCCACCCTTGACACGTCGTTCTTTGCCGATCTCAGTATCAAGGGATACGTCGCCACA TCTGCGAGAGGCTATGTTACGGGTACTGCAACCGGGGCTGACTCGACTTTCAAATGGGTGGTTCACTGGTATAAC TCCGCCGCACAGTACTGGACCTACACTTCGTCTTCCGGAGCTTTCACCTCCCCTGCTATGAAGCCCGGCACTTAC ACCATGGTATACTACCAGGGCGAATATGTCGTTGCCACCTCGTCAGTGACTGTTACTGCCGGATCAACCACATCG AAGAGTATCTCCGGGTCTGTGAAGACCGGAACGACAGTCTTCAGGATTGGAGACTGGGATGGAACACCGAACGGC TTCCTCAACGCGGCCAACCAGCTCCGTATGCATCCCTCCGATACCCGCATGTCTTCCTGGTCCCCGACCACCTAC ACAGTCGGCAGCTCTCAAGTCTCTTCTTTCCCCATGGCCCTCTTCAAATCGGTCAATTCACCTTTGACGATTAAA TTCACGGCATCATCTTCGCAGACCGGAGCTGCGACGCTGAGAATTGGCACAACCCTCTCCTTTGCGTCTGGCCGG CCCCAGGTTGTGTTCAACAGCTATTCCGGCGCCACCCCGGCTGCCCCGACTAACCTCAACTCCCGTGGCGTCACT CGCGGTGCGTATAGAGGGTTTGGCGAGGTTTACGACGTTTCGATACCGGCTGGAACTATCGTCGCTGGAACTAAC ACTATCACCATCAGCGTTGCTTCTGGTAGCTCTGGAGACACTTACCTGAGCCCGAACTTTATCTTCGATTGCGTG GAGCTCTTCCAGTAA
Transcript	>Pro_DTO070G2_2|g5647.t1 ATGATGTTTTTCAAGTCCTTGGCCATTGCTTCGCTAGCACTTTGGGCTAAGCAGGCATCCGCGGCCTTCGGAATC ACTACTAGCACTGCTTCCTATGTGATTGATGCTGGCTCTACAAACCCGCTTAAATTTACCGTCAGCCGGACAAAC TGTGACATTACTTCGATCAATTACTATGGATCCGAGCTTCAATACCAGTCGACTGGATCTCATATCGGATCGGGT CTTGGTAGCGCAACTGTGTCTGCCACGCAGAGTGGCGACTACATCAAGGTGACCTGCGAAACATCCACCTTGACA CACTACTATGTTGTCCACAACGGAGATTCGACCATCCACATGGCGACATACACAACCGCAGAACCTACTATTGGA GAACTTCGATATATCGCGCGCCTGAATTCAGCCCTGCTGCCGAATGAAGAGCCATTCGGTGTTGTCTCTAATATT GCAGGTGGCACTGTCGTCGAGGGAGAGGATGTGTTCTTGGTTAGTGGACAAACGCGAAGCAAGTTCTACTCGAGC GAACGGTTTATTGATGACCACATCCACTGTGTCTCTGGAAGCGCGCACCGTGTCTGCATGATCTTAAATCAATAT GAGACATCTGCTGGCGGACCTTTCCATCGTGATATCAACACCAACAATGTTGGTTCTTATACTGGCCTATACTGG TACATGAACTCCGGACACGTTCAGACCGAGACCTACCGCCAGGGCCTGCACGGCCCATACTCGATGGTCTTCAGC CGAAGCGGTACCCCCAGTTCCACCCTTGACACGTCGTTCTTTGCCGATCTCAGTATCAAGGGATACGTCGCCACA TCTGCGAGAGGCTATGTTACGGGTACTGCAACCGGGGCTGACTCGACTTTCAAATGGGTGGTTCACTGGTATAAC TCCGCCGCACAGTACTGGACCTACACTTCGTCTTCCGGAGCTTTCACCTCCCCTGCTATGAAGCCCGGCACTTAC ACCATGGTATACTACCAGGGCGAATATGTCGTTGCCACCTCGTCAGTGACTGTTACTGCCGGATCAACCACATCG AAGAGTATCTCCGGGTCTGTGAAGACCGGAACGACAGTCTTCAGGATTGGAGACTGGGATGGAACACCGAACGGC TTCCTCAACGCGGCCAACCAGCTCCGTATGCATCCCTCCGATACCCGCATGTCTTCCTGGTCCCCGACCACCTAC ACAGTCGGCAGCTCTCAAGTCTCTTCTTTCCCCATGGCCCTCTTCAAATCGGTCAATTCACCTTTGACGATTAAA TTCACGGCATCATCTTCGCAGACCGGAGCTGCGACGCTGAGAATTGGCACAACCCTCTCCTTTGCGTCTGGCCGG CCCCAGGTTGTGTTCAACAGCTATTCCGGCGCCACCCCGGCTGCCCCGACTAACCTCAACTCCCGTGGCGTCACT CGCGGTGCGTATAGAGGGTTTGGCGAGGTTTACGACGTTTCGATACCGGCTGGAACTATCGTCGCTGGAACTAAC ACTATCACCATCAGCGTTGCTTCTGGTAGCTCTGGAGACACTTACCTGAGCCCGAACTTTATCTTCGATTGCGTG GAGCTCTTCCAGTAA
Gene	>Pro_DTO070G2_2|g5647.t1 ATGATGTTTTTCAAGTCCTTGGCCATTGCTTCGCTAGCACTTTGGGCTAAGCAGGCATCCGCGGCCTTCGGAATC ACTACTAGCACTGCTTCCTATGTGATTGATGCTGGCTCTACAAACCCGCTTAAATTTACCGTCAGCCGGACAAAC TGTGACATTACTTCGATCAATTACTATGGATCCGAGCTTCAATACCAGTCGACTGGATCTCATATCGGATCGGGT CTTGGTAGCGCAACTGTGTCTGCCACGCAGAGTGGTGAGTTGAGAAACAAGACGTCTGTTGGAAAATATTCTGAT CAGTATAGGCGACTACATCAAGGTGACCTGCGAAACATCCACCTTGACACACTACTATGTTGTCCACAACGGAGA TTCGACCATCCACATGGCGACATACACAACCGCAGGTTAGTGTTGTTCGTGCGCAAATGTGTTTTTTATACTCAT TATAATCAGAACCTACTATTGGAGAACTTCGATATATCGCGCGCCTGAATTCAGCCCTGCTGCCGAATGAAGAGC CATTCGGTGTTGTCTCTAATATTGCAGGTGGCACTGTCGTCGAGGGAGAGGATGTGGTACGTTTTTTTCTGAAGC TTTTTTTCAATACAAACAGCTGACACATATTAGTTCTTGGTTAGTGGACAAACGCGAAGCAAGTTCTACTCGAGC GAACGGTTTATTGATGACCACATCCACTGTAAGAATACCTCTACCCTGGCCGATGCGAGTCGATTTAACATAAAC AGGTGTCTCTGGAAGCGCGCACCGTGTCTGCATGATCTTAAATCAATATGAGACATCTGCTGGCGGACCTTTCCA TCGGTAAGCTCCTCGTACAGCATGACTTGATCCAGACTAACATGCACCAGTGATATCAACACCAACAATGTTGGT TCTTATACTGGCCTATACTGGTACATGGTATGTGGAAACTGTCGCTCAATCAATAACTGCCTCTTACTCTATACA GAACTCCGGACACGTTCAGACCGAGACCTACCGCCAGGGCCTGCACGGCCCATACTCGATGGTCTTCAGCCGAAG CGGTACCCCCAGTTCCACCCTTGACACGTCGTTCTTTGCCGATCTCAGTATCAAGGGATACGTCGCCACATCTGC GAGAGGCTATGTTACGGGTACTGCAACCGGGGCTGACTCGACTTTCAAATGGGTGGTTCACTGGTAGGTCCAATG CAATACCTGGATGAGTACATATCTAACTCCAAGACAGGTATAACTCCGCCGCACAGTACTGGACCTACACTTCGT CTTCCGGAGCTTTCACCTCCCCTGCTATGAAGCCCGGCACTTACACCATGGTATACTACCAGGGCGAATATGTCG TTGCCACCTCGTCAGTGACTGTTACTGCCGGATCAACCACATCGAAGAGTATCTCCGGGTCTGTGAAGACCGGAA CGACAGTCTTCAGGATTGGAGACTGGGATGGAACGTAAGTTCATTGATTTTAACCCACATAATTGTTCCGATATT GACTGCCCATAGACCGAACGGCTTCCTCAACGCGGCCAACCAGCTCCGTATGCATCCCTCCGATACCCGCATGTC TTCCTGGTCCCCGACCACCTACACAGTCGGCAGCTCTCAAGTCTCTTCTTTCCCCATGGCCCTCTTCAAATCGGT CAATTCACCTTTGACGATTAAATTCACGGCATCATCTTCGCAGACCGGAGCTGCGACGCTGAGAATTGGCACAAC CCTCTCCTTTGCGTCTGGCCGGCCCCAGGTTGTGGTATGTTCAAGCACATTCACTTTCTACACTCTTAGCATGTA TCTAACTTTTACACAGTTCAACAGCTATTCCGGCGCCACCCCGGCTGCCCCGACTAACCTCAACTCCCGTGGCGT CACTCGCGGTGCGTATAGAGGGTTTGGCGAGGTTTACGACGTTTCGATACCGGCTGGAACTATCGTCGCTGGAAC TAACACTGTAAGGACTTTTGAGCCCAGTCAGATGATATGATGCTAATCCGGCCTAGATCACCATCAGCGTTGCTT CTGGTAGCTCTGGAGACACTTACCTGAGCCCGAACTTTGTGAGTATCTTTCTGGTTATCTGGTCTTTCCGATGTA AGCTTACCTGTCTCAATAGATCTTCGATTGCGTGGAGCTCTTCCAGTAA