© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Pro_DTO070G2_2|g5468.t1 |
| Gene name | |
| Location | scaffold_07:172931..174102 |
| Strand | + |
| Gene length (bp) | 1171 |
| Transcript length (bp) | 999 |
| Coding sequence length (bp) | 999 |
| Protein length (aa) | 333 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF04080 | Per1 | Per1-like family | 1.6E-103 | 57 | 320 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0006506 | GPI anchor biosynthetic process | Yes |
| GO:0009058 | biosynthetic process | No |
| GO:0006796 | phosphate-containing compound metabolic process | No |
| GO:1901135 | carbohydrate derivative metabolic process | No |
| GO:0008152 | metabolic process | No |
| GO:1901137 | carbohydrate derivative biosynthetic process | No |
| GO:0006505 | GPI anchor metabolic process | No |
| GO:0006650 | glycerophospholipid metabolic process | No |
| GO:0009987 | cellular process | No |
| GO:0043412 | macromolecule modification | No |
| GO:0036211 | protein modification process | No |
| GO:0046474 | glycerophospholipid biosynthetic process | No |
| GO:0008150 | biological_process | No |
| GO:0008654 | phospholipid biosynthetic process | No |
| GO:1903509 | liposaccharide metabolic process | No |
| GO:1901576 | organic substance biosynthetic process | No |
| GO:1901564 | organonitrogen compound metabolic process | No |
| GO:0044238 | primary metabolic process | No |
| GO:0006644 | phospholipid metabolic process | No |
| GO:0008610 | lipid biosynthetic process | No |
| GO:0019538 | protein metabolic process | No |
| GO:0044255 | cellular lipid metabolic process | No |
| GO:0046467 | membrane lipid biosynthetic process | No |
| GO:0044237 | cellular metabolic process | No |
| GO:0019637 | organophosphate metabolic process | No |
| GO:0046488 | phosphatidylinositol metabolic process | No |
| GO:0006643 | membrane lipid metabolic process | No |
| GO:0071704 | organic substance metabolic process | No |
| GO:0046486 | glycerolipid metabolic process | No |
| GO:0006793 | phosphorus metabolic process | No |
| GO:0045017 | glycerolipid biosynthetic process | No |
| GO:0009247 | glycolipid biosynthetic process | No |
| GO:0006629 | lipid metabolic process | No |
| GO:0006661 | phosphatidylinositol biosynthetic process | No |
| GO:0006497 | protein lipidation | No |
| GO:0006664 | glycolipid metabolic process | No |
| GO:0043170 | macromolecule metabolic process | No |
| GO:0044249 | cellular biosynthetic process | No |
| GO:0006807 | nitrogen compound metabolic process | No |
| GO:0090407 | organophosphate biosynthetic process | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| Yes | 1 - 29 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 10 | 29 | 19 |
| 2 | 139 | 161 | 22 |
| 3 | 176 | 195 | 19 |
| 4 | 208 | 230 | 22 |
| 5 | 235 | 257 | 22 |
| 6 | 264 | 286 | 22 |
| 7 | 301 | 318 | 17 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Pro_DTO070G2_2|g5468.t1 MNLGVGKVNLYTLFALVFLASLIGRSNASLGDHLPDFKECVQVCKTENCQHGNSVLPLHLRLLLWTCPAECDYTC QHVITDRRVSRDPPMISPIVQFHGKWPFRRLLGMQEPFSVLFSFFNFAAHWHGMSRIQESIPSWHSLRPYYMMFG YIGLASWSFSMLFHMRDFPLTEKLDYWAAGANVLFGLYLAVIRILRLDLENPPYRPTLRRLWTAICVLLYVLHVS YLTFWSWDYTYNMIANVVVGIIQNLMWTGFSIFRYQKHLKSWTAWPGMIVAWIIMAMSLELLDFPPWNGLIDAHS LWHLGTVVPAVWWYSFLIRDTQDDIAAHRLKA* |
| Coding | >Pro_DTO070G2_2|g5468.t1 ATGAATCTGGGCGTAGGAAAAGTGAATCTCTACACTCTTTTCGCTCTCGTTTTTCTAGCCTCCCTCATTGGCAGG TCCAACGCGTCATTAGGAGACCACCTCCCCGACTTCAAAGAATGTGTCCAGGTCTGTAAAACGGAAAATTGTCAG CACGGAAATTCAGTGCTACCGCTGCACCTCCGCTTGCTACTATGGACCTGCCCTGCTGAATGTGACTACACCTGT CAACATGTCATTACCGACCGTCGAGTTTCGCGTGATCCTCCAATGATCAGCCCGATTGTACAATTCCACGGGAAA TGGCCGTTCCGTAGGCTCCTAGGGATGCAGGAGCCCTTCTCGGTGCTCTTCTCGTTCTTCAACTTCGCCGCCCAC TGGCACGGCATGTCCCGTATCCAAGAGTCGATCCCCAGTTGGCACTCACTTCGCCCATACTACATGATGTTTGGA TACATTGGACTCGCAAGCTGGAGTTTCAGCATGTTATTTCACATGCGCGATTTCCCCCTGACCGAGAAACTGGAC TATTGGGCGGCTGGCGCCAACGTGCTGTTTGGTCTCTACCTTGCCGTCATTCGAATCCTCCGCCTGGACCTTGAA AATCCTCCATATCGGCCAACTCTGCGTCGACTTTGGACTGCTATCTGCGTTCTGCTATATGTATTGCACGTGTCT TATCTTACCTTTTGGTCTTGGGACTACACCTACAATATGATAGCGAACGTAGTGGTTGGCATTATCCAGAACCTT ATGTGGACCGGATTCAGTATCTTCCGATACCAAAAACATTTGAAGTCTTGGACCGCCTGGCCTGGTATGATTGTG GCGTGGATAATCATGGCTATGAGTTTGGAGCTGCTCGACTTCCCCCCTTGGAATGGGTTGATTGACGCGCACAGC CTCTGGCATCTGGGTACAGTGGTCCCCGCTGTGTGGTGGTATTCGTTCCTGATCAGGGACACACAGGACGATATT GCGGCGCATAGGCTCAAGGCATGA |
| Transcript | >Pro_DTO070G2_2|g5468.t1 ATGAATCTGGGCGTAGGAAAAGTGAATCTCTACACTCTTTTCGCTCTCGTTTTTCTAGCCTCCCTCATTGGCAGG TCCAACGCGTCATTAGGAGACCACCTCCCCGACTTCAAAGAATGTGTCCAGGTCTGTAAAACGGAAAATTGTCAG CACGGAAATTCAGTGCTACCGCTGCACCTCCGCTTGCTACTATGGACCTGCCCTGCTGAATGTGACTACACCTGT CAACATGTCATTACCGACCGTCGAGTTTCGCGTGATCCTCCAATGATCAGCCCGATTGTACAATTCCACGGGAAA TGGCCGTTCCGTAGGCTCCTAGGGATGCAGGAGCCCTTCTCGGTGCTCTTCTCGTTCTTCAACTTCGCCGCCCAC TGGCACGGCATGTCCCGTATCCAAGAGTCGATCCCCAGTTGGCACTCACTTCGCCCATACTACATGATGTTTGGA TACATTGGACTCGCAAGCTGGAGTTTCAGCATGTTATTTCACATGCGCGATTTCCCCCTGACCGAGAAACTGGAC TATTGGGCGGCTGGCGCCAACGTGCTGTTTGGTCTCTACCTTGCCGTCATTCGAATCCTCCGCCTGGACCTTGAA AATCCTCCATATCGGCCAACTCTGCGTCGACTTTGGACTGCTATCTGCGTTCTGCTATATGTATTGCACGTGTCT TATCTTACCTTTTGGTCTTGGGACTACACCTACAATATGATAGCGAACGTAGTGGTTGGCATTATCCAGAACCTT ATGTGGACCGGATTCAGTATCTTCCGATACCAAAAACATTTGAAGTCTTGGACCGCCTGGCCTGGTATGATTGTG GCGTGGATAATCATGGCTATGAGTTTGGAGCTGCTCGACTTCCCCCCTTGGAATGGGTTGATTGACGCGCACAGC CTCTGGCATCTGGGTACAGTGGTCCCCGCTGTGTGGTGGTATTCGTTCCTGATCAGGGACACACAGGACGATATT GCGGCGCATAGGCTCAAGGCATGA |
| Gene | >Pro_DTO070G2_2|g5468.t1 ATGAATCTGGGCGTAGGAAAAGTGAATCTCTACACTCTTTTCGCTCTCGTTTTTCTAGCCTCCCTCATTGGCAGG TCCAACGCGTCATTAGGAGACCACCTCCCCGACTTCAAAGAATGTGTCCAGGTACGACTCCCGCGACCAACAGAC CCTTGGAAACGACTAACAACCATAGGTCTGTAAAACGGAAAATTGTCAGCACGGAAATTCAGTGCTACGTATGTC AAATCATTGTTCCAACCGTTCGCCGCGTTTCCCCTTTGCTGATCTATTTAGCGCTGCACCTCCGCTTGCTACTAT GGACCTGCCCTGCTGAATGTGACTACACCTGTCAACATGTCATTACCGACCGTCGAGTTTCGCGTGATCCTCCAA TGATCAGCCCGATTGTACAATTCCACGGGAAATGGCCGTTCCGTAGGCTCCTAGGGATGCAGGAGCCCTTCTCGG TGCTCTTCTCGTTCTTCAACTTCGCCGCCCACTGGCACGGCATGTCCCGTATCCAAGAGTCGATCCCCAGTTGGC ACTCACTTCGCCCATACTACATGATGTTTGGATACATTGGACTCGCAAGCTGGAGTTTCAGCATGTTATTTCACA TGCGCGATTTCCCCCTGACCGAGAAACTGGACTATTGGGCGGCTGGCGCCAACGTGCTGTTTGGTCTCTACCTTG CCGTCATTCGAATCCTCCGCCTGGACCTTGAAAATCCTCCATATCGGCCAACTCTGCGTCGACTTTGGACTGCTA TCTGCGTTCTGCTATATGTATTGCACGTGTCTTATCTTACCTTTTGGTCTTGGGACTACACCTACAATATGATAG CGAACGTAGTGGTTGGCATTATCCAGAACCTTATGTGGACCGGATTCAGTATCTTCCGATACCAAAAACATTTGA AGTCTTGGACCGCCTGGCCTGGTATGATTGTGGCGTGGATAATCATGGCTATGAGTTTGGAGCTGCTCGACTTCC CCCCTTGGAATGGGTTGATTGACGCGCACAGCCTCTGGCATCTGGGTACAGTGGTCCCCGCTGTGTGGTGGTATT CGTAAGTCCCCCACGTTCCAACGACACAATACGTTTTCGTGACTAATGCATCGGTTGGTCCCGAAGGTTCCTGAT CAGGGACACACAGGACGATATTGCGGCGCATAGGCTCAAGGCATGA |