Protein ID | Pro_DTO070G2_2|g526.t1 |
Gene name | |
Location | scaffold_01:1375423..1377278 |
Strand | + |
Gene length (bp) | 1855 |
Transcript length (bp) | 1749 |
Coding sequence length (bp) | 1749 |
Protein length (aa) | 583 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF00128 | Alpha-amylase | Alpha amylase, catalytic domain | 1.2E-115 | 35 | 391 |
GO Term | Description | Terminal node |
---|---|---|
GO:0005975 | carbohydrate metabolic process | Yes |
GO:0071704 | organic substance metabolic process | No |
GO:0008152 | metabolic process | No |
GO:0044238 | primary metabolic process | No |
GO:0008150 | biological_process | No |
CAZyme category | E-value | Start | End |
---|---|---|---|
GH13_40 | 1.8E-171 | 35 | 391 |
Orthofinder run ID | 2 |
Orthogroup | 3477 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Pro_DTO070G2_2|g526.t1 MATPGNSNHRAWWKESSVYQIWPASFKDSNDDGIGDIPGIISKLDYIKNLAVDIVWLCPSYKSPQVDMGYDISDY YSIADEYGTVEDVEKLISGCHERGLKLLMDLVVNHTSDQHEWFKQARSSKDNEYRNWYIWKPAKYDEQGNRQPPN NWVSHFQGSAWQWDEQTQEYYLHLYAVEQPDLNWEHPPVRKAVHDIMRFWLDKGCDGFRMDVINFISKDQRFPDG PIKDPRTPWQWGDKWYANGPRLHEYLQDLGKILQEYDAFSVGEMPFVTDEKEVLRAVQFDRHEINMIFNFEHVDL DHGKLDKFEPGSWQLTDLKDFFERWQTFMYANDGWNALYWENHDQPRSIDRFAHASEEYRLVASKMLATALALQA GTPFVYQGQEIGTRNVPKEWGIEEYKDIDCLNHWKRIPKDDLAAQAIALQEYQKKSRDNGRTPVQWSAAENAGFT GPGVKPWMSINTDYVRVNAEAEIKDPNSTYHYWATVLKLRKKYLDIFVYGDFTLLDKPSQEVFAYTRQYGDQKAL VVCHWTDKTLEWDAASNGITSVKEVLLNTYEGVEEASKRFSGEKWTLRPFEAVVLLV* |
Coding | >Pro_DTO070G2_2|g526.t1 ATGGCTACACCAGGAAACTCCAACCACCGTGCCTGGTGGAAAGAGAGCTCCGTATACCAGATCTGGCCTGCATCC TTCAAGGATTCAAATGATGATGGTATCGGTGATATCCCCGGTATCATTTCCAAGCTGGACTACATCAAGAACCTC GCCGTGGATATCGTCTGGCTATGTCCATCGTATAAATCCCCGCAGGTGGACATGGGCTATGATATCTCCGACTAC TACAGCATTGCCGATGAGTACGGTACAGTTGAAGATGTTGAAAAATTGATTTCCGGATGCCATGAGCGGGGTCTG AAGCTCCTCATGGATCTGGTCGTCAACCACACCAGCGATCAGCATGAATGGTTCAAGCAGGCGCGCAGCTCCAAG GATAACGAGTACCGTAACTGGTACATCTGGAAGCCGGCTAAGTACGACGAACAAGGCAACCGCCAGCCTCCCAAC AACTGGGTCTCTCATTTCCAGGGCAGCGCCTGGCAATGGGACGAGCAGACCCAAGAATACTACCTGCACCTGTAC GCAGTCGAGCAGCCCGATCTCAACTGGGAACACCCGCCTGTCCGCAAAGCCGTGCACGATATCATGCGGTTCTGG CTCGACAAGGGCTGCGACGGGTTCCGCATGGACGTGATCAACTTCATTAGCAAGGACCAGAGATTCCCCGACGGA CCCATCAAGGACCCGCGGACACCCTGGCAGTGGGGCGACAAGTGGTATGCCAACGGCCCGCGCTTGCACGAGTAC CTCCAGGATCTGGGCAAGATTCTCCAGGAGTACGATGCCTTCAGCGTGGGTGAGATGCCGTTCGTCACCGACGAG AAGGAAGTGCTGCGTGCGGTGCAATTCGACCGCCATGAGATCAATATGATCTTCAATTTCGAACATGTTGACCTG GACCATGGCAAGCTTGATAAGTTTGAACCTGGCAGCTGGCAACTCACTGACTTGAAGGACTTCTTTGAGCGGTGG CAGACCTTTATGTATGCCAATGATGGCTGGAATGCGCTCTACTGGGAGAATCATGACCAGCCACGCTCTATTGAC CGCTTCGCGCATGCGAGTGAGGAGTATCGACTGGTCGCGTCGAAGATGCTGGCTACTGCGCTGGCATTGCAGGCT GGTACTCCGTTTGTTTACCAGGGACAGGAAATAGGAACCCGAAATGTGCCCAAGGAATGGGGTATTGAAGAATAC AAAGACATTGATTGTCTGAACCACTGGAAAAGAATACCCAAGGACGACCTTGCTGCCCAAGCAATTGCCCTGCAA GAATATCAGAAGAAGTCTCGCGACAACGGACGCACCCCGGTCCAGTGGTCCGCTGCTGAGAATGCCGGCTTCACC GGACCTGGCGTCAAGCCCTGGATGTCTATCAACACCGATTATGTGCGGGTCAATGCCGAGGCGGAAATCAAGGAC CCCAACTCAACATACCATTACTGGGCGACTGTGCTGAAGCTGCGCAAGAAGTACCTTGATATCTTTGTGTATGGC GATTTCACACTTCTGGACAAGCCAAGCCAGGAGGTCTTTGCGTACACTCGCCAGTATGGCGATCAAAAAGCCTTG GTTGTGTGCCACTGGACAGACAAGACTCTAGAGTGGGATGCGGCGAGCAACGGTATCACCAGCGTGAAGGAGGTC TTGCTCAATACTTATGAAGGTGTTGAGGAGGCTTCCAAGCGATTCTCCGGTGAGAAGTGGACACTTCGGCCCTTT GAGGCTGTTGTATTGCTCGTTTGA |
Transcript | >Pro_DTO070G2_2|g526.t1 ATGGCTACACCAGGAAACTCCAACCACCGTGCCTGGTGGAAAGAGAGCTCCGTATACCAGATCTGGCCTGCATCC TTCAAGGATTCAAATGATGATGGTATCGGTGATATCCCCGGTATCATTTCCAAGCTGGACTACATCAAGAACCTC GCCGTGGATATCGTCTGGCTATGTCCATCGTATAAATCCCCGCAGGTGGACATGGGCTATGATATCTCCGACTAC TACAGCATTGCCGATGAGTACGGTACAGTTGAAGATGTTGAAAAATTGATTTCCGGATGCCATGAGCGGGGTCTG AAGCTCCTCATGGATCTGGTCGTCAACCACACCAGCGATCAGCATGAATGGTTCAAGCAGGCGCGCAGCTCCAAG GATAACGAGTACCGTAACTGGTACATCTGGAAGCCGGCTAAGTACGACGAACAAGGCAACCGCCAGCCTCCCAAC AACTGGGTCTCTCATTTCCAGGGCAGCGCCTGGCAATGGGACGAGCAGACCCAAGAATACTACCTGCACCTGTAC GCAGTCGAGCAGCCCGATCTCAACTGGGAACACCCGCCTGTCCGCAAAGCCGTGCACGATATCATGCGGTTCTGG CTCGACAAGGGCTGCGACGGGTTCCGCATGGACGTGATCAACTTCATTAGCAAGGACCAGAGATTCCCCGACGGA CCCATCAAGGACCCGCGGACACCCTGGCAGTGGGGCGACAAGTGGTATGCCAACGGCCCGCGCTTGCACGAGTAC CTCCAGGATCTGGGCAAGATTCTCCAGGAGTACGATGCCTTCAGCGTGGGTGAGATGCCGTTCGTCACCGACGAG AAGGAAGTGCTGCGTGCGGTGCAATTCGACCGCCATGAGATCAATATGATCTTCAATTTCGAACATGTTGACCTG GACCATGGCAAGCTTGATAAGTTTGAACCTGGCAGCTGGCAACTCACTGACTTGAAGGACTTCTTTGAGCGGTGG CAGACCTTTATGTATGCCAATGATGGCTGGAATGCGCTCTACTGGGAGAATCATGACCAGCCACGCTCTATTGAC CGCTTCGCGCATGCGAGTGAGGAGTATCGACTGGTCGCGTCGAAGATGCTGGCTACTGCGCTGGCATTGCAGGCT GGTACTCCGTTTGTTTACCAGGGACAGGAAATAGGAACCCGAAATGTGCCCAAGGAATGGGGTATTGAAGAATAC AAAGACATTGATTGTCTGAACCACTGGAAAAGAATACCCAAGGACGACCTTGCTGCCCAAGCAATTGCCCTGCAA GAATATCAGAAGAAGTCTCGCGACAACGGACGCACCCCGGTCCAGTGGTCCGCTGCTGAGAATGCCGGCTTCACC GGACCTGGCGTCAAGCCCTGGATGTCTATCAACACCGATTATGTGCGGGTCAATGCCGAGGCGGAAATCAAGGAC CCCAACTCAACATACCATTACTGGGCGACTGTGCTGAAGCTGCGCAAGAAGTACCTTGATATCTTTGTGTATGGC GATTTCACACTTCTGGACAAGCCAAGCCAGGAGGTCTTTGCGTACACTCGCCAGTATGGCGATCAAAAAGCCTTG GTTGTGTGCCACTGGACAGACAAGACTCTAGAGTGGGATGCGGCGAGCAACGGTATCACCAGCGTGAAGGAGGTC TTGCTCAATACTTATGAAGGTGTTGAGGAGGCTTCCAAGCGATTCTCCGGTGAGAAGTGGACACTTCGGCCCTTT GAGGCTGTTGTATTGCTCGTTTGA |
Gene | >Pro_DTO070G2_2|g526.t1 ATGGCTACACCAGGAAACTCCAACCACCGTGCCTGGTGGAAAGAGAGCTCCGTATACCAGATCTGGCCTGCATCC TTCAAGGATTCAAATGATGATGGTATCGGTGATATCCCCGGTATCATTTCCAAGCTGGACTACATCAAGAACCTC GCCGTGGATATCGTCTGGCTATGTCCATCGTATAAATCCCCGCAGGTGGACATGGGCTATGATATCTCCGACTAC TACAGCATTGCCGATGAGTACGGTACAGTTGAAGATGTTGAAAAATTGATTTCCGGATGCCATGAGCGGGGTCTG AAGCTCCTCATGGATCTGGTCGTCAACCACACCAGCGATCAGCATGAATGGTTCAAGCAGGCGCGCAGCTCCAAG GATAACGAGTACCGTAACTGGTACATCTGGAAGCCGGCTAAGTACGACGAACAAGGCAACCGCCAGCCTCCCAAC AACTGGGTCTCTCATTTCCAGGGTACGTACTTTATCATCGTCGGTTAATTACATCCATCTAATGAAGACTATAGG CAGCGCCTGGCAATGGGACGAGCAGACCCAAGAATACTACCTGCACCTGTACGCAGTCGAGCAGCCCGATCTCAA CTGGGAACACCCGCCTGTCCGCAAAGCCGTGCACGATATCATGCGGTTCTGGCTCGACAAGGGCTGCGACGGGTT CCGCATGGACGTGATCAACTTCATTAGCAAGGACCAGAGATTCCCCGACGGACCCATCAAGGACCCGCGGACACC CTGGCAGTGGGGCGACAAGTGGTATGCCAACGGCCCGCGCTTGCACGAGTACCTCCAGGATCTGGGCAAGATTCT CCAGGAGTACGATGCCTTCAGCGTGGGTGAGATGCCGTTCGTCACCGACGAGAAGGAAGTGCTGCGTGCGGTGCA ATTCGACCGCCATGAGATCAATATGATCTTCAATTTCGAACATGTTGACCTGGACCATGGCAAGCTTGATAAGTT TGAACCTGGCAGCTGGCAACTCACTGACTTGAAGGACTTCTTTGAGCGGTGGCAGACCTTTATGTATGCCAATGA TGGCTGGAATGCGCTCTACTGGGAGAATCATGACCAGCCACGCTCTATTGACCGCTTCGCGCATGCGAGTGAGGA GTATCGACTGGTCGCGTCGAAGATGCTGGCTACTGCGCTGGCATTGCAGGCTGGTACTCCGTTTGTTTACCAGGG ACAGGAAATAGGAACCCGAAATGTGCCCAAGGAATGGGGTATTGAAGAATACAAAGACATTGATTGTCTGAACCA CTGGAAAAGGTAATGACACTTTCCTAGTGCAACTCGTGGACGTTAGCTGACAGTATTCTACAGAATACCCAAGGA CGACCTTGCTGCCCAAGCAATTGCCCTGCAAGAATATCAGAAGAAGTCTCGCGACAACGGACGCACCCCGGTCCA GTGGTCCGCTGCTGAGAATGCCGGCTTCACCGGACCTGGCGTCAAGCCCTGGATGTCTATCAACACCGATTATGT GCGGGTCAATGCCGAGGCGGAAATCAAGGACCCCAACTCAACATACCATTACTGGGCGACTGTGCTGAAGCTGCG CAAGAAGTACCTTGATATCTTTGTGTATGGCGATTTCACACTTCTGGACAAGCCAAGCCAGGAGGTCTTTGCGTA CACTCGCCAGTATGGCGATCAAAAAGCCTTGGTTGTGTGCCACTGGACAGACAAGACTCTAGAGTGGGATGCGGC GAGCAACGGTATCACCAGCGTGAAGGAGGTCTTGCTCAATACTTATGAAGGTGTTGAGGAGGCTTCCAAGCGATT CTCCGGTGAGAAGTGGACACTTCGGCCCTTTGAGGCTGTTGTATTGCTCGTTTGA |