Protein ID | Pro_DTO070G2_2|g520.t1 |
Gene name | |
Location | scaffold_01:1360417..1362218 |
Strand | - |
Gene length (bp) | 1801 |
Transcript length (bp) | 1641 |
Coding sequence length (bp) | 1641 |
Protein length (aa) | 547 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF06687 | SUR7 | SUR7/PalI family | 9.0E-25 | 9 | 162 |
GO Term | Description | Terminal node |
---|---|---|
GO:0005886 | plasma membrane | Yes |
GO:0005575 | cellular_component | No |
GO:0110165 | cellular anatomical entity | No |
GO:0016020 | membrane | No |
SignalP signal predicted | Location | Score |
---|---|---|
Yes | 1 - 32 | 0.99271 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 7 | 29 | 22 |
2 | 83 | 105 | 22 |
3 | 118 | 140 | 22 |
4 | 150 | 172 | 22 |
Orthofinder run ID | 2 |
Orthogroup | 3482 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Pro_DTO070G2_2|g520.t1 MLLKPATPLTILLLIAFALLLLSCISTPIVKGIPLATFKDVDYGVFGYCKGSTCTNIHVGYTSNDISSTGDDFNL PSGTRKSLSSILIIHPVAAFLTLICLCLAIAAHFHAPSHSPRFLLALLILLLPTLLVSLLAFLVDILLFVPHLGW GGWIVLVATIILTSCGVVTCAMRRTLVSRKARKRRIAENSEMSGENYYNRQNAAAAAPPVPAPIDPKEAFVSHSL NSDSGPTFASFHVETRDSDDDRTPLNSRTPMSDTPAQPDHHGAPYRGPQDEFGNIPPQGPGPYGAGLMSRNPSDP RVRPQYSDGSMGSRRGGAPPGFNGRGRGGYPPRGGRGGRGGRGGPYMGPPRGPPGSRGGYMGPNPGRGGRGGIMP PRGPPVGYESGPGGPNRGFDAYGRPGSPPMDDPYSYGPPGQMHQPPPGPIGMAVSPETVGQAIEMTPQSRPQYEM HESTQPMSSVPQTLSAENHGAVPESPTSIYSRPNSYDPPRSGWGANDPRTVTPQPPQQNNISTNYYEDVDPRFAR RPSPPTNSGIPPSLTPGATHF* |
Coding | >Pro_DTO070G2_2|g520.t1 ATGTTGCTCAAACCCGCGACACCCCTCACCATCTTGCTGCTGATCGCCTTTGCGCTTTTGCTACTCTCATGTATC TCAACTCCTATTGTGAAGGGAATTCCTCTAGCAACTTTCAAAGATGTCGATTATGGTGTCTTTGGATATTGCAAG GGTAGTACCTGTACCAATATCCATGTGGGATACACGAGCAATGATATAAGTAGCACAGGCGATGATTTCAATCTC CCTTCCGGTACTCGAAAGTCACTGTCCTCGATTCTCATTATCCATCCAGTCGCCGCCTTCCTGACCCTTATTTGC CTCTGCCTGGCCATTGCGGCCCACTTCCATGCGCCCTCCCACTCGCCGCGCTTCCTATTGGCGCTTCTCATCTTG TTGCTGCCAACACTGCTCGTGTCTCTCCTCGCATTCCTCGTCGATATCTTGCTCTTTGTACCACATCTAGGATGG GGTGGTTGGATTGTGCTGGTCGCGACCATCATCCTCACCTCCTGTGGAGTGGTCACCTGTGCCATGCGCCGAACC CTTGTGAGTCGGAAGGCAAGGAAGCGTCGGATCGCGGAAAATTCTGAGATGAGTGGAGAGAACTATTATAACCGA CAGAATGCCGCTGCGGCTGCGCCCCCTGTTCCGGCTCCCATTGACCCCAAGGAAGCCTTTGTGTCGCACTCTCTC AACTCCGACTCGGGCCCAACATTCGCATCCTTCCACGTGGAAACGCGCGACAGTGATGACGATCGAACACCCCTC AACTCGCGGACTCCCATGAGCGATACCCCAGCACAACCGGACCATCACGGTGCTCCCTATCGCGGCCCGCAAGAT GAATTTGGCAATATCCCGCCTCAGGGCCCGGGCCCGTACGGTGCAGGTCTAATGTCACGGAATCCCTCCGATCCC CGGGTTCGCCCCCAATATTCCGATGGCAGTATGGGTTCTCGAAGAGGAGGCGCGCCGCCTGGCTTCAATGGACGC GGGCGGGGTGGATATCCTCCCCGGGGTGGACGCGGTGGACGCGGTGGACGTGGAGGACCTTACATGGGACCTCCT CGCGGCCCTCCTGGCTCCCGGGGTGGCTACATGGGGCCAAATCCAGGCCGTGGAGGTCGCGGTGGAATTATGCCA CCCCGGGGACCACCAGTCGGCTATGAGTCCGGTCCAGGCGGCCCCAACCGCGGTTTCGACGCATACGGTCGACCT GGGTCGCCTCCCATGGATGACCCTTATAGTTATGGGCCACCGGGTCAGATGCACCAGCCACCTCCCGGGCCCATT GGCATGGCCGTGTCACCGGAGACGGTAGGCCAAGCCATTGAGATGACTCCGCAATCTCGCCCGCAGTACGAGATG CATGAGTCGACTCAACCAATGAGCAGCGTACCGCAAACACTGTCAGCCGAAAACCACGGTGCCGTCCCTGAAAGC CCGACAAGCATATACAGTCGACCGAATTCCTATGATCCTCCTCGCTCGGGCTGGGGTGCAAATGATCCTCGCACT GTGACCCCGCAGCCACCGCAACAAAACAACATCAGTACCAATTACTACGAGGACGTGGATCCCCGTTTTGCTCGT CGGCCATCGCCTCCTACTAACTCTGGGATCCCCCCCTCTCTGACGCCTGGAGCTACTCACTTTTGA |
Transcript | >Pro_DTO070G2_2|g520.t1 ATGTTGCTCAAACCCGCGACACCCCTCACCATCTTGCTGCTGATCGCCTTTGCGCTTTTGCTACTCTCATGTATC TCAACTCCTATTGTGAAGGGAATTCCTCTAGCAACTTTCAAAGATGTCGATTATGGTGTCTTTGGATATTGCAAG GGTAGTACCTGTACCAATATCCATGTGGGATACACGAGCAATGATATAAGTAGCACAGGCGATGATTTCAATCTC CCTTCCGGTACTCGAAAGTCACTGTCCTCGATTCTCATTATCCATCCAGTCGCCGCCTTCCTGACCCTTATTTGC CTCTGCCTGGCCATTGCGGCCCACTTCCATGCGCCCTCCCACTCGCCGCGCTTCCTATTGGCGCTTCTCATCTTG TTGCTGCCAACACTGCTCGTGTCTCTCCTCGCATTCCTCGTCGATATCTTGCTCTTTGTACCACATCTAGGATGG GGTGGTTGGATTGTGCTGGTCGCGACCATCATCCTCACCTCCTGTGGAGTGGTCACCTGTGCCATGCGCCGAACC CTTGTGAGTCGGAAGGCAAGGAAGCGTCGGATCGCGGAAAATTCTGAGATGAGTGGAGAGAACTATTATAACCGA CAGAATGCCGCTGCGGCTGCGCCCCCTGTTCCGGCTCCCATTGACCCCAAGGAAGCCTTTGTGTCGCACTCTCTC AACTCCGACTCGGGCCCAACATTCGCATCCTTCCACGTGGAAACGCGCGACAGTGATGACGATCGAACACCCCTC AACTCGCGGACTCCCATGAGCGATACCCCAGCACAACCGGACCATCACGGTGCTCCCTATCGCGGCCCGCAAGAT GAATTTGGCAATATCCCGCCTCAGGGCCCGGGCCCGTACGGTGCAGGTCTAATGTCACGGAATCCCTCCGATCCC CGGGTTCGCCCCCAATATTCCGATGGCAGTATGGGTTCTCGAAGAGGAGGCGCGCCGCCTGGCTTCAATGGACGC GGGCGGGGTGGATATCCTCCCCGGGGTGGACGCGGTGGACGCGGTGGACGTGGAGGACCTTACATGGGACCTCCT CGCGGCCCTCCTGGCTCCCGGGGTGGCTACATGGGGCCAAATCCAGGCCGTGGAGGTCGCGGTGGAATTATGCCA CCCCGGGGACCACCAGTCGGCTATGAGTCCGGTCCAGGCGGCCCCAACCGCGGTTTCGACGCATACGGTCGACCT GGGTCGCCTCCCATGGATGACCCTTATAGTTATGGGCCACCGGGTCAGATGCACCAGCCACCTCCCGGGCCCATT GGCATGGCCGTGTCACCGGAGACGGTAGGCCAAGCCATTGAGATGACTCCGCAATCTCGCCCGCAGTACGAGATG CATGAGTCGACTCAACCAATGAGCAGCGTACCGCAAACACTGTCAGCCGAAAACCACGGTGCCGTCCCTGAAAGC CCGACAAGCATATACAGTCGACCGAATTCCTATGATCCTCCTCGCTCGGGCTGGGGTGCAAATGATCCTCGCACT GTGACCCCGCAGCCACCGCAACAAAACAACATCAGTACCAATTACTACGAGGACGTGGATCCCCGTTTTGCTCGT CGGCCATCGCCTCCTACTAACTCTGGGATCCCCCCCTCTCTGACGCCTGGAGCTACTCACTTTTGA |
Gene | >Pro_DTO070G2_2|g520.t1 ATGTTGCTCAAACCCGCGACACCCCTCACCATCTTGCTGCTGATCGCCTTTGCGCTTTTGCTACTCTCATGTATC TCAACTCCTATTGTGAAGGGAATTCCTCTAGCAACTTTCAAAGATGTCGATTATGGTGTCTTTGGATATTGCAAG GGTAGTACCTGTACCAATATCCATGTGGGATACACGAGCAGTAAGTCTCCCCCCTGCGTGTCTGCCTATTCTCCG CTAAGTTTCATGCAGATGATATAAGTAGCACAGGCGATGATTTCAATCTCCCTTCCGGTACTCGAAAGTCACTGT CCTCGATTCTCATTATCCATCCAGTCGCCGCCTTCCTGACCCTTATTTGCCTCTGCCTGGCCATTGCGGCCCACT TCCATGCGCCCTCCCACTCGCCGCGCTTCCTATTGGCGCTTCTCATCTTGTTGCTGCCAACACTGCTCGTGTCTC TCCTCGCATTCCTCGTCGATATCTTGCTCTTTGTACCACATCTAGGATGGGGTGGTTGGATTGTGCTGGTCGCGA CCATCATCCTCACCTCCTGTGGAGTGGTCACCTGTGCCATGCGCCGAACCCTTGTGAGTCGGAAGGCAAGGAAGC GTCGGATCGCGGAAAATTCTGAGATGAGTGGAGAGAACTATTATAACCGACAGAATGCCGCTGCGGCTGCGCCCC CTGTTCCGGCTCCCATTGACCCCAAGGAAGCCTTTGTGTCGCACTCTCTCAACTCCGACTCGGGCCCAACATTCG CATCCTTCCACGTGGAAACGCGCGACAGTGATGACGATCGAACACCCCTCAACTCGCGGACTCCCATGAGCGATA CCCCAGCACAACCGGACCATCACGGTGCTCCCTATCGCGGCCCGCAAGATGAATTTGGCAATATCCCGCCTCAGG GCCCGGGCCCGTACGGTGCAGGTCTAATGTCACGGAATCCCTCCGATCCCCGGGTTCGCCCCCAATATTCCGATG GCAGTATGGGTTCTCGAAGAGGAGGCGCGCCGCCTGGCTTCAATGGACGCGGGCGGGGTGGATATCCTCCCCGGG GTGGACGCGGTGGACGCGGTGGACGTGGAGGACCTTACATGGGACCTCCTCGCGGCCCTCCTGGCTCCCGGGGTG GCTACATGGGGCCAAATCCAGGCCGTGGAGGTCGCGGTGGAATTATGCCACCCCGGGGACCACCAGTCGGCTATG AGTCCGGTCCAGGCGGCCCCAACCGCGGTTTCGACGCATACGGTCGACCTGGGTCGCCTCCCATGGATGACCCTT ATAGTTATGGGCCACCGGGTCAGATGCACCAGCCACCTCCCGGGCCCATTGGCATGGCCGTGTCACCGGAGACGG TAGGCCAAGCCATTGAGATGACTCCGCAATCTCGCCCGCAGTACGAGATGCATGAGTCGACTCAACCAATGAGCA GCGTACCGCAAACACTGTCAGCCGAAAACCACGGTGCCGTCCCTGAAAGCCCGACAAGCATATACAGTCGACCGA AGTAAGTCGGAATGCTACGAATACCGTTCCTAAGTTGACCACTAACCTTTGTTCAGTTCCTATGATCCTCCTCGC TCGGGCTGGGGTGCAAATGATCCTCGCACTGTGACCCCGCAGCCACCGCAACAAAACAACATCAGTACCAATTAC TACGAGGACGTGGATCCCCGTTTTGCTCGTCGGCCATCGCCTCCTACTAACTCTGGGATCCCCCCCTCTCTGACG CCTGGAGCTACTCACTGTACGTACACTCACAGATCACACGTGTTGAAGGATTCTTGCTAACTTTCTCCTAGTTTG A |