© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Pro_DTO070G2_2|g494.t1 |
| Gene name | |
| Location | scaffold_01:1298007..1298612 |
| Strand | - |
| Gene length (bp) | 605 |
| Transcript length (bp) | 555 |
| Coding sequence length (bp) | 555 |
| Protein length (aa) | 185 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00089 | Trypsin | Trypsin | 1.7E-26 | 23 | 183 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0006508 | proteolysis | Yes |
| GO:0004252 | serine-type endopeptidase activity | Yes |
| GO:0004175 | endopeptidase activity | No |
| GO:0008150 | biological_process | No |
| GO:0019538 | protein metabolic process | No |
| GO:0003674 | molecular_function | No |
| GO:1901564 | organonitrogen compound metabolic process | No |
| GO:0006807 | nitrogen compound metabolic process | No |
| GO:0003824 | catalytic activity | No |
| GO:0016787 | hydrolase activity | No |
| GO:0071704 | organic substance metabolic process | No |
| GO:0043170 | macromolecule metabolic process | No |
| GO:0044238 | primary metabolic process | No |
| GO:0008233 | peptidase activity | No |
| GO:0008236 | serine-type peptidase activity | No |
| GO:0008152 | metabolic process | No |
| GO:0017171 | serine hydrolase activity | No |
| GO:0140096 | catalytic activity, acting on a protein | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| Yes | 1 - 19 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Pro_DTO070G2_2|g494.t1 MKSTFLVSLIPFIQGVLGSVEVLGGSPVTIDDLPYLASISKSGVYTCASVIISNDRVVTSVQLKQNVFWGICMDS IKDDRNARFNTDTNDFDFAVLELFSPLVPGPTVKPIEFIQSGQEPEDGTECVASGWGDSGEQLQSVTLPIVNREE CNQTYAGQITDLMICAGSEAGKGTCPGDRGGPVT* |
| Coding | >Pro_DTO070G2_2|g494.t1 ATGAAATCCACTTTTCTTGTTTCTCTTATACCTTTCATACAGGGTGTTCTGGGCTCTGTAGAAGTCCTAGGTGGC TCACCTGTTACGATTGATGACCTTCCCTACCTGGCCAGCATTTCGAAATCAGGCGTCTATACCTGTGCTAGTGTT ATTATCAGCAACGACCGTGTCGTTACTTCCGTGCAGCTCAAGCAAAACGTCTTCTGGGGGATCTGCATGGACAGT ATCAAAGATGATCGGAATGCTCGGTTTAACACTGACACCAATGATTTTGACTTTGCCGTGCTCGAACTATTTTCT CCTCTCGTACCCGGCCCGACTGTCAAGCCGATTGAATTTATTCAGTCTGGTCAGGAGCCAGAGGATGGGACTGAA TGCGTAGCTTCCGGCTGGGGTGACTCGGGAGAACAATTACAATCGGTTACACTCCCTATCGTGAACCGAGAAGAA TGTAATCAGACTTATGCCGGCCAAATCACCGACCTTATGATCTGTGCTGGCTCAGAAGCTGGGAAAGGTACCTGT CCAGGGGACCGTGGTGGCCCGGTTACTTAG |
| Transcript | >Pro_DTO070G2_2|g494.t1 ATGAAATCCACTTTTCTTGTTTCTCTTATACCTTTCATACAGGGTGTTCTGGGCTCTGTAGAAGTCCTAGGTGGC TCACCTGTTACGATTGATGACCTTCCCTACCTGGCCAGCATTTCGAAATCAGGCGTCTATACCTGTGCTAGTGTT ATTATCAGCAACGACCGTGTCGTTACTTCCGTGCAGCTCAAGCAAAACGTCTTCTGGGGGATCTGCATGGACAGT ATCAAAGATGATCGGAATGCTCGGTTTAACACTGACACCAATGATTTTGACTTTGCCGTGCTCGAACTATTTTCT CCTCTCGTACCCGGCCCGACTGTCAAGCCGATTGAATTTATTCAGTCTGGTCAGGAGCCAGAGGATGGGACTGAA TGCGTAGCTTCCGGCTGGGGTGACTCGGGAGAACAATTACAATCGGTTACACTCCCTATCGTGAACCGAGAAGAA TGTAATCAGACTTATGCCGGCCAAATCACCGACCTTATGATCTGTGCTGGCTCAGAAGCTGGGAAAGGTACCTGT CCAGGGGACCGTGGTGGCCCGGTTACTTAG |
| Gene | >Pro_DTO070G2_2|g494.t1 ATGAAATCCACTTTTCTTGTTTCTCTTATACCTTTCATACAGGGTGTTCTGGGCTCTGTAGAAGTCCTAGGTGGC TCACCTGTTACGATTGATGACCTTCCCTACCTGGCCAGCATTTCGAAATCAGGCGTCTATACCTGTGCTAGTGTT ATTATCAGCAACGACCGTGTCGTTACTTCCGTGCAGTGCGTTTATGGCCTAGAGTCACAACCCACGAGCCTTTCC GTGAGAACAGGCTCAAGCAAAACGTCTTCTGGGGGATCTGCATGGACAGTATCAAAGATGATCGGAATGCTCGGT TTAACACTGACACCAATGATTTTGACTTTGCCGTGCTCGAACTATTTTCTCCTCTCGTACCCGGCCCGACTGTCA AGCCGATTGAATTTATTCAGTCTGGTCAGGAGCCAGAGGATGGGACTGAATGCGTAGCTTCCGGCTGGGGTGACT CGGGAGAACAATTACAATCGGTTACACTCCCTATCGTGAACCGAGAAGAATGTAATCAGACTTATGCCGGCCAAA TCACCGACCTTATGATCTGTGCTGGCTCAGAAGCTGGGAAAGGTACCTGTCCAGGGGACCGTGGTGGCCCGGTTA CTTAG |