© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Pro_DTO070G2_2|g4937.t1 |
| Gene name | |
| Location | scaffold_05:1396219..1399059 |
| Strand | + |
| Gene length (bp) | 2840 |
| Transcript length (bp) | 2724 |
| Coding sequence length (bp) | 2724 |
| Protein length (aa) | 908 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF01532 | Glyco_hydro_47 | Glycosyl hydrolase family 47 | 4.9E-187 | 230 | 903 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0004571 | mannosyl-oligosaccharide 1,2-alpha-mannosidase activity | Yes |
| GO:0005509 | calcium ion binding | Yes |
| GO:0016020 | membrane | Yes |
| GO:0016798 | hydrolase activity, acting on glycosyl bonds | No |
| GO:0003674 | molecular_function | No |
| GO:0015924 | mannosyl-oligosaccharide mannosidase activity | No |
| GO:0046872 | metal ion binding | No |
| GO:0003824 | catalytic activity | No |
| GO:0005575 | cellular_component | No |
| GO:0043167 | ion binding | No |
| GO:0016787 | hydrolase activity | No |
| GO:0015923 | mannosidase activity | No |
| GO:0004559 | alpha-mannosidase activity | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0043169 | cation binding | No |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds | No |
| GO:0005488 | binding | No |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 7 | 25 | 18 |
| CAZyme category | E-value | Start | End |
|---|---|---|---|
| GH47 | 2.5E-178 | 231 | 903 |
| Orthofinder run ID | 2 |
| Orthogroup | 3876 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Pro_DTO070G2_2|g4937.t1 MFRARRYRVLVIFAAAVVFTFFHFARSRDWSYTVIEESSVHSPDAAHPQNPAVAAAIEESRNRVLPDPNRGSTSS PPQTEKIISPVGPNSGSKDNNRFKDPSDTPPVKTPIKSDPKDSAKDSAKDSAKEPAKVGGTDSLPPPATENTNSV NDEEIDNGGTGRMAAERPEPGIPTAKWKKFPERFPVPAEEVIKLPKGETKKIPKLQAKFKDESSSGKQERLQRLS TIKAEFTHAWRGYKKIAMGHDEVKPLSKEFEDPFNGWGATLVDSLDSLWIMQLKDEFSEALDLIKNIDFKTSLRA DIPMFETTIRYLGGLLGAYDISGHRYPVLLEKAEELAEVLIGAFDTPNRMPHLYYRWAPEYASKPHRASSRAGLA EIGSLSLEFTRLAQLTKRDKYYDAIARITNELEKIQDLTSIPGLWPLRVNAQGCSKYSKNTPPRDSSPTPEQNLA SATETTTTVTHKTYAAPTDLESYLKLIPRDTSPDIERYAQPANDTQAASEPRIQSREQNTPADKCNGGLILPHSP RDNGYAMGGMADSTYEYLPKEYLLLGGMNEQYMNMYKKAAAAARKNLLFQPMVKGGRDIRFMASTSPMTPGKIAE LTPSDLEYEGAHLTCFVGGMFAIGAKAFGIDADLELAAKLTDGCVWAYESTQTGVMPERFRLLPCEKGSACEWDQ ARFDIGVARYSRIDPGAGHSFRDGESSYEQRVNLISHDPPQGSSSGSVPIPMPGSLNPHDSDVLSKRDGLALGKR AEAIAPASSPSPTSSGTELEDRDAPRSSSSPASPHIAEVGKDHLPAGMISIPSPKYYLRPEAIESVFIMYRLTGD ESWRHKGWKMFEAISKYTRTELANAAIHDVTAQKPIHKDTMESFWLSETLKYFYLLFSDPTVVDLDKYVLNTEAH PFLRPLA* |
| Coding | >Pro_DTO070G2_2|g4937.t1 ATGTTTCGAGCTCGCCGATACCGAGTTCTGGTCATATTCGCGGCGGCTGTCGTCTTCACATTCTTCCACTTTGCG CGGTCACGCGATTGGAGCTATACAGTGATTGAAGAGTCTAGCGTTCACTCACCCGATGCTGCCCATCCGCAAAAC CCGGCCGTTGCTGCTGCCATTGAGGAGAGTCGAAACCGCGTGCTTCCCGACCCCAATCGCGGCTCCACCTCCTCC CCACCACAGACAGAGAAGATCATCTCGCCCGTGGGCCCCAATAGCGGCTCAAAGGACAACAACCGGTTTAAAGAT CCCTCCGACACTCCACCAGTGAAGACTCCCATCAAGAGTGATCCGAAGGACTCTGCGAAGGACTCTGCGAAGGAC TCTGCGAAGGAACCAGCGAAGGTGGGAGGCACCGACAGCTTGCCACCACCGGCAACGGAGAATACCAATAGCGTA AATGATGAGGAAATTGATAATGGAGGGACAGGCAGAATGGCAGCGGAGCGCCCTGAACCTGGCATTCCAACGGCC AAGTGGAAGAAGTTCCCCGAACGGTTCCCCGTCCCTGCAGAGGAGGTGATCAAGCTGCCAAAGGGAGAGACGAAG AAAATTCCCAAGCTGCAAGCGAAGTTCAAGGATGAGTCGAGCTCCGGCAAGCAAGAGCGCCTACAACGCCTTAGC ACTATCAAGGCCGAGTTCACGCATGCCTGGCGAGGCTATAAGAAGATTGCGATGGGACATGACGAAGTCAAGCCT CTGTCGAAGGAGTTTGAAGACCCATTCAACGGCTGGGGAGCGACATTGGTCGATTCCCTCGATTCTCTCTGGATT ATGCAGTTGAAAGATGAATTCTCCGAGGCTTTGGATCTGATCAAAAACATTGATTTCAAAACGTCACTGAGAGCA GATATTCCGATGTTTGAGACAACCATCCGCTACCTTGGAGGTCTTTTGGGTGCCTATGACATTTCTGGTCATCGA TACCCAGTGCTTTTGGAGAAAGCAGAGGAGCTTGCTGAGGTTCTCATTGGTGCCTTTGACACACCCAACCGCATG CCGCACCTTTACTATCGCTGGGCCCCCGAGTATGCTTCGAAGCCGCATCGGGCGTCTTCCCGAGCCGGCCTAGCT GAAATTGGGTCGCTTTCCTTGGAGTTTACCCGTTTGGCTCAACTGACCAAGCGGGACAAATACTATGATGCGATA GCCCGGATCACCAACGAATTGGAGAAAATCCAAGATTTAACTAGCATCCCGGGACTGTGGCCTCTACGGGTCAAT GCACAGGGATGTTCCAAGTACTCCAAGAACACACCTCCGCGTGATAGTAGCCCTACACCCGAGCAAAACCTTGCT AGTGCAACCGAGACTACCACTACGGTGACCCACAAGACTTACGCTGCACCAACAGACCTTGAGAGCTATTTGAAG CTCATCCCACGAGACACAAGCCCTGACATCGAAAGATATGCCCAGCCTGCCAATGATACGCAAGCTGCCAGTGAG CCTCGCATTCAGTCACGCGAGCAAAATACACCAGCAGATAAATGCAATGGCGGCTTGATACTTCCCCATTCACCC CGCGATAACGGGTACGCCATGGGAGGAATGGCTGACTCGACCTACGAATACCTGCCCAAGGAATATCTGCTACTG GGTGGCATGAACGAGCAATACATGAATATGTATAAAAAGGCAGCCGCTGCGGCCCGCAAGAATCTTCTCTTCCAA CCCATGGTGAAAGGTGGACGTGATATTCGGTTCATGGCCTCCACTAGTCCAATGACACCTGGAAAGATTGCAGAG CTCACTCCATCCGATCTTGAATACGAAGGCGCTCACTTGACGTGTTTCGTCGGCGGCATGTTCGCCATAGGAGCC AAGGCCTTCGGCATCGATGCTGATCTGGAACTTGCAGCCAAACTGACGGACGGCTGTGTTTGGGCTTACGAGTCG ACACAAACCGGAGTGATGCCTGAGCGCTTCCGCCTTTTGCCCTGTGAGAAAGGCTCGGCATGTGAGTGGGATCAA GCCCGCTTTGACATTGGTGTGGCACGCTACTCTCGCATAGACCCCGGGGCAGGACATTCGTTCCGCGACGGTGAG AGCAGCTACGAACAGCGCGTGAATTTGATCTCGCACGATCCACCCCAAGGATCTTCGAGCGGGTCGGTTCCCATC CCCATGCCGGGCTCATTAAACCCCCACGATAGCGATGTGTTGTCCAAGCGAGATGGACTCGCATTAGGAAAACGT GCGGAAGCAATTGCTCCTGCTTCAAGCCCGAGCCCTACTTCCAGTGGAACCGAACTGGAGGACCGGGATGCACCT CGTTCGTCTTCGTCGCCCGCTTCGCCTCACATCGCCGAAGTCGGCAAAGACCACCTCCCCGCAGGCATGATCAGT ATCCCGTCACCGAAATACTACCTTCGGCCCGAGGCGATCGAGTCAGTATTTATCATGTACCGTCTGACTGGCGAC GAATCCTGGCGTCACAAAGGGTGGAAGATGTTCGAGGCTATTTCGAAGTATACCCGAACGGAGCTAGCCAACGCG GCCATCCACGATGTCACAGCCCAGAAACCGATCCACAAGGATACGATGGAGTCTTTCTGGCTATCTGAGACATTG AAGTATTTCTATCTTTTGTTCAGCGACCCTACTGTCGTGGACTTGGATAAATATGTTCTGAATACCGAAGCGCAT CCATTCCTGCGCCCACTTGCATAA |
| Transcript | >Pro_DTO070G2_2|g4937.t1 ATGTTTCGAGCTCGCCGATACCGAGTTCTGGTCATATTCGCGGCGGCTGTCGTCTTCACATTCTTCCACTTTGCG CGGTCACGCGATTGGAGCTATACAGTGATTGAAGAGTCTAGCGTTCACTCACCCGATGCTGCCCATCCGCAAAAC CCGGCCGTTGCTGCTGCCATTGAGGAGAGTCGAAACCGCGTGCTTCCCGACCCCAATCGCGGCTCCACCTCCTCC CCACCACAGACAGAGAAGATCATCTCGCCCGTGGGCCCCAATAGCGGCTCAAAGGACAACAACCGGTTTAAAGAT CCCTCCGACACTCCACCAGTGAAGACTCCCATCAAGAGTGATCCGAAGGACTCTGCGAAGGACTCTGCGAAGGAC TCTGCGAAGGAACCAGCGAAGGTGGGAGGCACCGACAGCTTGCCACCACCGGCAACGGAGAATACCAATAGCGTA AATGATGAGGAAATTGATAATGGAGGGACAGGCAGAATGGCAGCGGAGCGCCCTGAACCTGGCATTCCAACGGCC AAGTGGAAGAAGTTCCCCGAACGGTTCCCCGTCCCTGCAGAGGAGGTGATCAAGCTGCCAAAGGGAGAGACGAAG AAAATTCCCAAGCTGCAAGCGAAGTTCAAGGATGAGTCGAGCTCCGGCAAGCAAGAGCGCCTACAACGCCTTAGC ACTATCAAGGCCGAGTTCACGCATGCCTGGCGAGGCTATAAGAAGATTGCGATGGGACATGACGAAGTCAAGCCT CTGTCGAAGGAGTTTGAAGACCCATTCAACGGCTGGGGAGCGACATTGGTCGATTCCCTCGATTCTCTCTGGATT ATGCAGTTGAAAGATGAATTCTCCGAGGCTTTGGATCTGATCAAAAACATTGATTTCAAAACGTCACTGAGAGCA GATATTCCGATGTTTGAGACAACCATCCGCTACCTTGGAGGTCTTTTGGGTGCCTATGACATTTCTGGTCATCGA TACCCAGTGCTTTTGGAGAAAGCAGAGGAGCTTGCTGAGGTTCTCATTGGTGCCTTTGACACACCCAACCGCATG CCGCACCTTTACTATCGCTGGGCCCCCGAGTATGCTTCGAAGCCGCATCGGGCGTCTTCCCGAGCCGGCCTAGCT GAAATTGGGTCGCTTTCCTTGGAGTTTACCCGTTTGGCTCAACTGACCAAGCGGGACAAATACTATGATGCGATA GCCCGGATCACCAACGAATTGGAGAAAATCCAAGATTTAACTAGCATCCCGGGACTGTGGCCTCTACGGGTCAAT GCACAGGGATGTTCCAAGTACTCCAAGAACACACCTCCGCGTGATAGTAGCCCTACACCCGAGCAAAACCTTGCT AGTGCAACCGAGACTACCACTACGGTGACCCACAAGACTTACGCTGCACCAACAGACCTTGAGAGCTATTTGAAG CTCATCCCACGAGACACAAGCCCTGACATCGAAAGATATGCCCAGCCTGCCAATGATACGCAAGCTGCCAGTGAG CCTCGCATTCAGTCACGCGAGCAAAATACACCAGCAGATAAATGCAATGGCGGCTTGATACTTCCCCATTCACCC CGCGATAACGGGTACGCCATGGGAGGAATGGCTGACTCGACCTACGAATACCTGCCCAAGGAATATCTGCTACTG GGTGGCATGAACGAGCAATACATGAATATGTATAAAAAGGCAGCCGCTGCGGCCCGCAAGAATCTTCTCTTCCAA CCCATGGTGAAAGGTGGACGTGATATTCGGTTCATGGCCTCCACTAGTCCAATGACACCTGGAAAGATTGCAGAG CTCACTCCATCCGATCTTGAATACGAAGGCGCTCACTTGACGTGTTTCGTCGGCGGCATGTTCGCCATAGGAGCC AAGGCCTTCGGCATCGATGCTGATCTGGAACTTGCAGCCAAACTGACGGACGGCTGTGTTTGGGCTTACGAGTCG ACACAAACCGGAGTGATGCCTGAGCGCTTCCGCCTTTTGCCCTGTGAGAAAGGCTCGGCATGTGAGTGGGATCAA GCCCGCTTTGACATTGGTGTGGCACGCTACTCTCGCATAGACCCCGGGGCAGGACATTCGTTCCGCGACGGTGAG AGCAGCTACGAACAGCGCGTGAATTTGATCTCGCACGATCCACCCCAAGGATCTTCGAGCGGGTCGGTTCCCATC CCCATGCCGGGCTCATTAAACCCCCACGATAGCGATGTGTTGTCCAAGCGAGATGGACTCGCATTAGGAAAACGT GCGGAAGCAATTGCTCCTGCTTCAAGCCCGAGCCCTACTTCCAGTGGAACCGAACTGGAGGACCGGGATGCACCT CGTTCGTCTTCGTCGCCCGCTTCGCCTCACATCGCCGAAGTCGGCAAAGACCACCTCCCCGCAGGCATGATCAGT ATCCCGTCACCGAAATACTACCTTCGGCCCGAGGCGATCGAGTCAGTATTTATCATGTACCGTCTGACTGGCGAC GAATCCTGGCGTCACAAAGGGTGGAAGATGTTCGAGGCTATTTCGAAGTATACCCGAACGGAGCTAGCCAACGCG GCCATCCACGATGTCACAGCCCAGAAACCGATCCACAAGGATACGATGGAGTCTTTCTGGCTATCTGAGACATTG AAGTATTTCTATCTTTTGTTCAGCGACCCTACTGTCGTGGACTTGGATAAATATGTTCTGAATACCGAAGCGCAT CCATTCCTGCGCCCACTTGCATAA |
| Gene | >Pro_DTO070G2_2|g4937.t1 ATGTTTCGAGCTCGCCGATACCGAGTTCTGGTCATATTCGCGGCGGCTGTCGTCTTCACATTCTTCCACTTTGCG CGGTCACGCGATTGGAGCTATACAGTGATTGAAGAGTCTAGCGTTCACTCACCCGATGCTGCCCATCCGCAAAAC CCGGCCGTTGCTGCTGCCATTGAGGAGAGTCGAAACCGCGTGCTTCCCGACCCCAATCGCGGCTCCACCTCCTCC CCACCACAGACAGAGAAGATCATCTCGCCCGTGGGCCCCAATAGCGGCTCAAAGGACAACAACCGGTTTAAAGAT CCCTCCGACACTCCACCAGTGAAGACTCCCATCAAGAGTGATCCGAAGGACTCTGCGAAGGACTCTGCGAAGGAC TCTGCGAAGGAACCAGCGAAGGTGGGAGGCACCGACAGCTTGCCACCACCGGCAACGGAGAATACCAATAGCGTA AATGATGAGGAAATTGATAATGGAGGGACAGGCAGAATGGCAGCGGAGCGCCCTGAACCTGGCATTCCAACGGCC AAGTGGAAGAAGTTCCCCGAACGGTTCCCCGTCCCTGCAGAGGAGGTGATCAAGCTGCCAAAGGGAGAGACGAAG AAAATTCCCAAGCTGCAAGCGAAGTTCAAGGATGAGTCGAGCTCCGGCAAGCAAGAGCGCCTACAACGCCTTAGC ACTATCAAGGCCGAGTTCACGCATGCCTGGCGAGGCTATAAGAAGATTGCGATGGGACATGACGAAGTCAAGCCT CTGTCGAAGGAGTTTGAAGACCCATTCAACGGCTGGGGAGCGACATTGGTCGATTCCCTCGATTCTCTCTGGATT ATGCAGTTGAAAGATGAATTCTCCGAGGCTTTGGATCTGATCAAAAACATTGATTTCAAAACGTCACTGAGAGCA GATATTCCGATGTTTGAGACAACCATCCGCTACCTTGGAGGTCTTTTGGGTGCCTATGACATTTCTGGTCATCGA TACCCAGTGCTTTTGGAGAAAGCAGAGGAGCTTGCTGAGGTTCTCATTGGTGCCTTTGACACACCCAACCGCATG CCGCACCTTTACTATCGCTGGGCCCCGTAAGTCTTGTCACAAATTCTTCCTGATCATCTAGATGACGACTAACCA ACCTTTCTCAGCGAGTATGCTTCGAAGCCGCATCGGGCGTCTTCCCGAGCCGGCCTAGCTGAAATTGGGTCGCTT TCCTTGGAGTTTACCCGTTTGGCTCAACTGACCAAGCGGGACAAATACTATGATGCGATAGCCCGGATCACCAAC GAATTGGAGAAAATCCAAGATTTAACTAGCATCCCGGGACTGTGGCCTCTACGGGTCAATGCACAGGGATGTTCC AAGTACTCCAAGAACACACCTCCGCGTGATAGTAGCCCTACACCCGAGCAAAACCTTGCTAGTGCAACCGAGACT ACCACTACGGTGACCCACAAGACTTACGCTGCACCAACAGACCTTGAGAGCTATTTGAAGCTCATCCCACGAGAC ACAAGCCCTGACATCGAAAGATATGCCCAGCCTGCCAATGATACGCAAGCTGCCAGTGAGCCTCGCATTCAGTCA CGCGAGCAAAATACACCAGCAGATAAATGCAATGGCGGCTTGATACTTCCCCATTCACCCCGCGATAACGGGTAC GCCATGGGAGGAATGGCTGACTCGACCTACGAATACCTGCCCAAGGAATATCTGCTACTGGGTGGCATGAACGAG CAATACATGAATATGTATAAAAAGGCAGCCGCTGCGGCCCGCAAGAATCTTCTCTTCCAACCCATGGTGAAAGGT GGACGTGATATTCGGTTCATGGCCTCCACTAGTCCAATGACACCTGGAAAGATTGCAGAGCTCACTCCATCCGAT CTTGAATACGAAGGCGCTCACTTGACGTGTTTCGTCGGCGGCATGTTCGCCATAGGAGCCAAGGCCTTCGGCATC GATGCTGATCTGGAACTTGCAGCCAAACTGACGGACGGCTGTGTTTGGGCTTACGAGTCGACACAAACCGGAGTG ATGCCTGAGCGCTTCCGCCTTTTGCCCTGTGAGAAAGGCTCGGCATGTGAGTGGGATCAAGCCCGCTTTGACATT GGTGTGGCACGCTACTCTCGCATAGACCCCGGGGCAGGACATTCGTTCCGCGACGGTGAGAGCAGCTACGAACAG CGCGTGAATTTGATCTCGCACGATCCACCCCAAGGATCTTCGAGCGGGTCGGTTCCCATCCCCATGCCGGGCTCA TTAAACCCCCACGATAGCGATGTGTTGTCCAAGCGAGATGGACTCGCATTAGGAAAACGTGCGGAAGCAATTGCT CCTGCTTCAAGCCCGAGCCCTACTTCCAGTGGAACCGAACTGGAGGACCGGGATGCACCTCGTTCGTCTTCGTCG CCCGCTTCGCCTCACATCGCCGAAGTCGGCAAAGACCACCTCCCCGCAGGCATGATCAGTATCCCGTCACCGAAA TACTACCTTCGGCCCGAGGCGATCGAGTCAGTATTTATCATGTACCGTCTGACTGGCGACGAATCCTGGCGTCAC AAAGGGTGGAAGATGTTCGAGGCTATTTCGAAGTATACCCGAACGGAGCTAGCCAACGCGGCCATCCACGATGTC ACAGCCCAGAAACCGATCCACAAGGATACGATGGAGTCTTTCTGGCTATCTGAGACATTGAAGTATTTCTATCTT TTGTTCAGCGACCCTACTGTCGTGGACTTGGATAAATATGTTCTGTAAGTGACTGACGTAGCCTGTAAACAAACT CTGACCAAGAACTGACTTTTTACAGGAATACCGAAGCGCATCCATTCCTGCGCCCACTTGCATAA |